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The map label for this gene is dsdX [C]

Identifier: 51893627

GI number: 51893627

Start: 2670629

End: 2671987

Strand: Reverse

Name: dsdX [C]

Synonym: STH2489

Alternate gene names: 51893627

Gene position: 2671987-2670629 (Counterclockwise)

Preceding gene: 51893628

Following gene: 51893625

Centisome position: 74.93

GC content: 65.86

Gene sequence:

>1359_bases
ATGGCATCAGGCCCGATTCTTCTTGTCATCCTGTTGGCCGCGATCGCATTCATCATCTATAGTACCGCCAAGCTGAAGCT
GAACCCGTTCCTGGCCCTGCTCCTCACCGCCTACGGCGTCGGTTTCGCCGCCGGCATGCCGGCCACCGAGATCGTCTCCA
CCATCACCAACGGATTCGGCGGCCTCATGACCAGCATCGGCCTCGTGATCATCCTGGGCACCATCATCGGCGTCTTCCTG
GAGAAGTCCGGCGCCGCCATCGTGATGGCCGATTCGATCCTGAAGGTGGTGGGTGAGAAGCGGCCCGCCCTGGCCATGAA
CCTGATCGGCTACATCGTCTCCATCCCGGTCTTCTGCGATTCCGGCTTCGTCATCCTGTCCTCCCTGAACAAGGCGCTGT
CCAAGCGGACCGGCGTCTCGCTGACCGCCCTGGCGGTGGCGCTCTCCACCGGCCTGTACGCCACCCACGTGCTGGTGCCG
CCGACCCCCGGCCCGCTGGCCGCCGCAGGCAACCTGGGCCTGACCAACCTCGGGCTGGCGATCATGGTCGGCCTCCTGGT
TGCCATCCCCACGTCGCTGGCCGGTCTGTTCTGGGCCAACCGGTTCGCCAAGGACGGCAAGACCGACAAGTCCTCTCCGG
AGGCGGCGCTCAGGGCCTGGGAGGAGATGAAGGCCCAGTATGGCCGGCTGCCCGGCGTCTGGGCCGCCTATGCCCCCATC
GTGGTGCCCATCGCCCTGATCGCCCTCTCTTCGGTGGCCGACTTCCCCAGCCATCCCTTCGGTGAAGGGGCCGTGAAGAC
CGTCCTGAACTTCCTGGGCACCCCGGTGACCGCCCTGCTGATCGGCGTCTTCTGCTGCCTGTTCCTGGTGGAGAAGATCG
ATGAGAAGGTCCTCAACGACTGGATCGGCGCTTCGCTGAAGGACGCCGCCACGATTCTGATCGTCACCGGCGCCGGCGGC
GCCCTGGGCAAGATCCTCTCGACCACTCCCATCGGCTCCTACCTGGGTGAGACCCTCTCCACCTGGAACCTGGGCATCTT
CCTGCCGTTCGTGATCGCCGCCGCGCTCAAGACCGCCCAGGGCTCCTCCACCGTTGCCCTGGTCACCACCTCCGCCATCA
TCGCCCCGATGCTGCCGGCCCTGGGCTTTGACAGCGAAATGGGCCGCGTGCTGATGGTGATGGCCATAGGTGCCGGCTCG
ATGGTGGTCTCCCACGCCAACGACAGCTTCTTCTGGGTGGTCTCCCAGTTCTCCGACATGGACGTCGCCACCGCCTACCG
GGCTCAGACCATCGGCACGGCCGTCACCGGTGTGGTTGCCATCGTGACCACCGCCCTCCTGTCGCTGGTGCTGCTCTGA

Upstream 100 bases:

>100_bases
ACCAGTGGCTGCGGCGGGCAACCGCCCAGGCTATGCGGCTGGTCCGGGTTGGCATACAGGTTCCCCGTTAGACCTTCGGA
GAAAGATGGAGGAATGAGTG

Downstream 100 bases:

>100_bases
GCGGCGCCGCTTGCAGGCCCGTTTTGTCCGGGCCGCGTTCCCGCAAACAGTCCTCGACCGCAGGGGTTCTCCCTGCGGTC
TTCGTTCATCGTCCACCGCC

Product: GntP family permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 452; Mature: 451

Protein sequence:

>452_residues
MASGPILLVILLAAIAFIIYSTAKLKLNPFLALLLTAYGVGFAAGMPATEIVSTITNGFGGLMTSIGLVIILGTIIGVFL
EKSGAAIVMADSILKVVGEKRPALAMNLIGYIVSIPVFCDSGFVILSSLNKALSKRTGVSLTALAVALSTGLYATHVLVP
PTPGPLAAAGNLGLTNLGLAIMVGLLVAIPTSLAGLFWANRFAKDGKTDKSSPEAALRAWEEMKAQYGRLPGVWAAYAPI
VVPIALIALSSVADFPSHPFGEGAVKTVLNFLGTPVTALLIGVFCCLFLVEKIDEKVLNDWIGASLKDAATILIVTGAGG
ALGKILSTTPIGSYLGETLSTWNLGIFLPFVIAAALKTAQGSSTVALVTTSAIIAPMLPALGFDSEMGRVLMVMAIGAGS
MVVSHANDSFFWVVSQFSDMDVATAYRAQTIGTAVTGVVAIVTTALLSLVLL

Sequences:

>Translated_452_residues
MASGPILLVILLAAIAFIIYSTAKLKLNPFLALLLTAYGVGFAAGMPATEIVSTITNGFGGLMTSIGLVIILGTIIGVFL
EKSGAAIVMADSILKVVGEKRPALAMNLIGYIVSIPVFCDSGFVILSSLNKALSKRTGVSLTALAVALSTGLYATHVLVP
PTPGPLAAAGNLGLTNLGLAIMVGLLVAIPTSLAGLFWANRFAKDGKTDKSSPEAALRAWEEMKAQYGRLPGVWAAYAPI
VVPIALIALSSVADFPSHPFGEGAVKTVLNFLGTPVTALLIGVFCCLFLVEKIDEKVLNDWIGASLKDAATILIVTGAGG
ALGKILSTTPIGSYLGETLSTWNLGIFLPFVIAAALKTAQGSSTVALVTTSAIIAPMLPALGFDSEMGRVLMVMAIGAGS
MVVSHANDSFFWVVSQFSDMDVATAYRAQTIGTAVTGVVAIVTTALLSLVLL
>Mature_451_residues
ASGPILLVILLAAIAFIIYSTAKLKLNPFLALLLTAYGVGFAAGMPATEIVSTITNGFGGLMTSIGLVIILGTIIGVFLE
KSGAAIVMADSILKVVGEKRPALAMNLIGYIVSIPVFCDSGFVILSSLNKALSKRTGVSLTALAVALSTGLYATHVLVPP
TPGPLAAAGNLGLTNLGLAIMVGLLVAIPTSLAGLFWANRFAKDGKTDKSSPEAALRAWEEMKAQYGRLPGVWAAYAPIV
VPIALIALSSVADFPSHPFGEGAVKTVLNFLGTPVTALLIGVFCCLFLVEKIDEKVLNDWIGASLKDAATILIVTGAGGA
LGKILSTTPIGSYLGETLSTWNLGIFLPFVIAAALKTAQGSSTVALVTTSAIIAPMLPALGFDSEMGRVLMVMAIGAGSM
VVSHANDSFFWVVSQFSDMDVATAYRAQTIGTAVTGVVAIVTTALLSLVLL

Specific function: Probable Permease For An Unknown Substrate. [C]

COG id: COG2610

COG function: function code GE; H+/gluconate symporter and related permeases

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gntP permease family [H]

Homologues:

Organism=Escherichia coli, GI1788707, Length=447, Percent_Identity=32.4384787472036, Blast_Score=184, Evalue=1e-47,
Organism=Escherichia coli, GI1789097, Length=457, Percent_Identity=32.1663019693654, Blast_Score=181, Evalue=8e-47,
Organism=Escherichia coli, GI1790716, Length=434, Percent_Identity=29.7235023041475, Blast_Score=179, Evalue=2e-46,
Organism=Escherichia coli, GI48994935, Length=454, Percent_Identity=30.6167400881057, Blast_Score=171, Evalue=6e-44,
Organism=Escherichia coli, GI48994939, Length=441, Percent_Identity=28.7981859410431, Blast_Score=155, Evalue=5e-39,
Organism=Escherichia coli, GI1790776, Length=442, Percent_Identity=26.2443438914027, Blast_Score=134, Evalue=1e-32,
Organism=Escherichia coli, GI2367370, Length=457, Percent_Identity=27.1334792122538, Blast_Score=134, Evalue=2e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003474 [H]

Pfam domain/function: PF02447 GntP_permease [H]

EC number: NA

Molecular weight: Translated: 46499; Mature: 46368

Theoretical pI: Translated: 8.04; Mature: 8.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASGPILLVILLAAIAFIIYSTAKLKLNPFLALLLTAYGVGFAAGMPATEIVSTITNGFG
CCCCHHHHHHHHHHHHHHHHHHHHEEHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
GLMTSIGLVIILGTIIGVFLEKSGAAIVMADSILKVVGEKRPALAMNLIGYIVSIPVFCD
HHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCC
SGFVILSSLNKALSKRTGVSLTALAVALSTGLYATHVLVPPTPGPLAAAGNLGLTNLGLA
CCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHEEEEEECCCCCCCCCCCCCCHHHHHHH
IMVGLLVAIPTSLAGLFWANRFAKDGKTDKSSPEAALRAWEEMKAQYGRLPGVWAAYAPI
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHH
VVPIALIALSSVADFPSHPFGEGAVKTVLNFLGTPVTALLIGVFCCLFLVEKIDEKVLND
HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
WIGASLKDAATILIVTGAGGALGKILSTTPIGSYLGETLSTWNLGIFLPFVIAAALKTAQ
HHCCCCCCCEEEEEEECCCHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHCC
GSSTVALVTTSAIIAPMLPALGFDSEMGRVLMVMAIGAGSMVVSHANDSFFWVVSQFSDM
CCCEEEEHHHHHHHHHHHHHCCCCHHHHHEEHHEEECCCCEEEEECCCCEEEEEECCCCC
DVATAYRAQTIGTAVTGVVAIVTTALLSLVLL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure 
ASGPILLVILLAAIAFIIYSTAKLKLNPFLALLLTAYGVGFAAGMPATEIVSTITNGFG
CCCHHHHHHHHHHHHHHHHHHHHEEHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
GLMTSIGLVIILGTIIGVFLEKSGAAIVMADSILKVVGEKRPALAMNLIGYIVSIPVFCD
HHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCC
SGFVILSSLNKALSKRTGVSLTALAVALSTGLYATHVLVPPTPGPLAAAGNLGLTNLGLA
CCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHEEEEEECCCCCCCCCCCCCCHHHHHHH
IMVGLLVAIPTSLAGLFWANRFAKDGKTDKSSPEAALRAWEEMKAQYGRLPGVWAAYAPI
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHH
VVPIALIALSSVADFPSHPFGEGAVKTVLNFLGTPVTALLIGVFCCLFLVEKIDEKVLND
HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
WIGASLKDAATILIVTGAGGALGKILSTTPIGSYLGETLSTWNLGIFLPFVIAAALKTAQ
HHCCCCCCCEEEEEEECCCHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHCC
GSSTVALVTTSAIIAPMLPALGFDSEMGRVLMVMAIGAGSMVVSHANDSFFWVVSQFSDM
CCCEEEEHHHHHHHHHHHHHCCCCHHHHHEEHHEEECCCCEEEEECCCCEEEEEECCCCC
DVATAYRAQTIGTAVTGVVAIVTTALLSLVLL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]