| Definition | Symbiobacterium thermophilum IAM 14863 chromosome, complete genome. |
|---|---|
| Accession | NC_006177 |
| Length | 3,566,135 |
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The map label for this gene is 51893619
Identifier: 51893619
GI number: 51893619
Start: 2663715
End: 2664362
Strand: Reverse
Name: 51893619
Synonym: STH2481
Alternate gene names: NA
Gene position: 2664362-2663715 (Counterclockwise)
Preceding gene: 51893620
Following gene: 51893618
Centisome position: 74.71
GC content: 70.99
Gene sequence:
>648_bases ATGCAGAATGCGGAGGTCAGAGAACTGGTGCAGCGTTCGCTGGAGCGCTACGCGGGCGACGAGCGGGTGCTCGACGCCTT CTGGCAGTGGGCCTCGAACCCGACCCCGCCCTCGGCAGGTTACGCGCTGGAGGAGAACGCCGGGTTCATCGCCACCAACC TCATGCTGCGTTACGGCGAGCCCGCGGTCGACCTGGTGATGTCCGTCAACGAGGAGTGCCGCCGGCTGGCCGGGCGGGCC TCGATTCAGGAGCTCCAGCGCACCATCGTGACGGTGCTCAACGGACCGGTGGGCGAGCAGCTCCGACAGGGCATCGTCCG GCGGCTCTCGCAGCCGACGGTCGCGCGGCGGGCCCTGACGGCGTGGCTGGTCAACCGTGCCCGATGGCGCCGGATGCCCG GCCGCGAGCCGGTAGTGGCCGGCGAGTTCGACTGGTCGCTGGGCGCCGACCTGGAAGGCAGCGGAGCCGACTGCCAGAGC GCCGTGCTGCGCGCCCTCTACGGTCCCGAGGTGGCGCAGGTGGATCTGGCCCGCGAGGCGATGGCCGTCGGCGTCGTCAA CCGGCTGTTCTACCGCAACGTGGCAGGCCGTATGGAGGCGAAGCTCCGTCCGGGGCCGCGGCTGCCGGTTTCTGCCCTCG TCTACTAG
Upstream 100 bases:
>100_bases AGCATAGCATGGCGCACAGACACGGCGAGAGCCCCGCACACGCCCCGGGGTATGGGGGGCGGTCATCTGGTCAATACTTG GGGGCCGAGGGGGGTTTCCC
Downstream 100 bases:
>100_bases CTCCCGCGATACCTCCGGTGCCGCGCGCGGCGTCTACTATATCGAGGAAGATGCTGCACGTGCCAAGGGGGAGCCGCTGT GGCAGGAACGGGCAACAAGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 215; Mature: 215
Protein sequence:
>215_residues MQNAEVRELVQRSLERYAGDERVLDAFWQWASNPTPPSAGYALEENAGFIATNLMLRYGEPAVDLVMSVNEECRRLAGRA SIQELQRTIVTVLNGPVGEQLRQGIVRRLSQPTVARRALTAWLVNRARWRRMPGREPVVAGEFDWSLGADLEGSGADCQS AVLRALYGPEVAQVDLAREAMAVGVVNRLFYRNVAGRMEAKLRPGPRLPVSALVY
Sequences:
>Translated_215_residues MQNAEVRELVQRSLERYAGDERVLDAFWQWASNPTPPSAGYALEENAGFIATNLMLRYGEPAVDLVMSVNEECRRLAGRA SIQELQRTIVTVLNGPVGEQLRQGIVRRLSQPTVARRALTAWLVNRARWRRMPGREPVVAGEFDWSLGADLEGSGADCQS AVLRALYGPEVAQVDLAREAMAVGVVNRLFYRNVAGRMEAKLRPGPRLPVSALVY >Mature_215_residues MQNAEVRELVQRSLERYAGDERVLDAFWQWASNPTPPSAGYALEENAGFIATNLMLRYGEPAVDLVMSVNEECRRLAGRA SIQELQRTIVTVLNGPVGEQLRQGIVRRLSQPTVARRALTAWLVNRARWRRMPGREPVVAGEFDWSLGADLEGSGADCQS AVLRALYGPEVAQVDLAREAMAVGVVNRLFYRNVAGRMEAKLRPGPRLPVSALVY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23876; Mature: 23876
Theoretical pI: Translated: 9.13; Mature: 9.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQNAEVRELVQRSLERYAGDERVLDAFWQWASNPTPPSAGYALEENAGFIATNLMLRYGE CCCHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCEECCCCCCHHHHHHHHCCC PAVDLVMSVNEECRRLAGRASIQELQRTIVTVLNGPVGEQLRQGIVRRLSQPTVARRALT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHH AWLVNRARWRRMPGREPVVAGEFDWSLGADLEGSGADCQSAVLRALYGPEVAQVDLAREA HHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHH MAVGVVNRLFYRNVAGRMEAKLRPGPRLPVSALVY HHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCC >Mature Secondary Structure MQNAEVRELVQRSLERYAGDERVLDAFWQWASNPTPPSAGYALEENAGFIATNLMLRYGE CCCHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCEECCCCCCHHHHHHHHCCC PAVDLVMSVNEECRRLAGRASIQELQRTIVTVLNGPVGEQLRQGIVRRLSQPTVARRALT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHH AWLVNRARWRRMPGREPVVAGEFDWSLGADLEGSGADCQSAVLRALYGPEVAQVDLAREA HHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHH MAVGVVNRLFYRNVAGRMEAKLRPGPRLPVSALVY HHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA