| Definition | Symbiobacterium thermophilum IAM 14863 chromosome, complete genome. |
|---|---|
| Accession | NC_006177 |
| Length | 3,566,135 |
Click here to switch to the map view.
The map label for this gene is bchI [H]
Identifier: 51893579
GI number: 51893579
Start: 2628142
End: 2629779
Strand: Reverse
Name: bchI [H]
Synonym: STH2441
Alternate gene names: 51893579
Gene position: 2629779-2628142 (Counterclockwise)
Preceding gene: 51893580
Following gene: 51893578
Centisome position: 73.74
GC content: 76.01
Gene sequence:
>1638_bases ATGGAATCCGTTTTCGGCCTGGTGCGGCATCCCGGCAACGATGCGCTCTTCCGGGCCGTCGAGATGTCGCTGGTCTCCAC CCTGGCCGGAAGGCCCCTGCACATTCACGCCGAGGGGCTCAGGGGCACCGGCAAGACGACCATCATGCGGCGGGTGCGGA AGGCGCTGCCCCGCATCCGGCGCATCCGGGGCTGCCTGTACAACTGCGACCCGTCCGCCCCCCACTGCCCCGTCCACCGG GGCCTGAGCCCGGAGGAGGTGGCGGCGCTGGGGGAGGAGCGGGTGCCGATGCCGTTCCTGGAGATCTCCCACGCCGCCAA GATCGGCACGGTGGTGGGCTCCATCGACCTGAGCCGGCTGGTGAGCGCCACCCATCCCGAGGCGGCGCTGCTGCCCGGCA CCATCCCCCAGGCGCACCGGGGCATCCTGTTCGTGGACGAGATCAACCGGCTGGCCGAGACCTCGCCCGAGCTGGCCGAC GTGCTGCTGGACGTCATGGGCACCCGGCCGGGGCGAGTCCAGATCGAGGAGACGGGCCTGCCGCCGGTGGAGCTGCCGGT GCTGGTCTCGGTGTGGGCGGCCTCCAACCCGGACGAGGAGCCGGGCCCCCTGGAGGAGATCCGCCGGCAGCTCAGCGACC GGTTCGACTTCGCCATCTACACCGACCGGCCGTCGGACCCCGAGGTGGTGGAGCAGATCCTCGCCGCCGCCGAGGCCGGC GAGGCCCGGCCGCCGCGCATCGCCGATACGAAGGCCGAACTGTGGCGGACCCGGCTGACCCTGCGCACCGCCGATCTGCG CCAGGTGACGATCCCGCCCGGCATCCGCCGGCAGGTGGCCGCGCTGTACAGCCAGTTCGACCTGGAGTCGTTGCGGGGGG TGGAGGCCATCCAGGCCGGCATCCGGCTCTCCGCCTGCCTGGACGGCCGCAGGGAGGTCCAGCCGGAGGACCTGCTGCGG GTGGTTCCCATGGCTCTGCGCCACCGGGTGGATCCGGAGCTGCTGCGGCGGGTGACCAGCTACCTGGCCGAGGGGCTGGC GCCCGCGGAGACGCCGGCGCCCTTGGCGGCGGCTTCCGGCGGTCCGGCGACGGCCCCGGGCCGCACCCGCTTCCCCGGCC TCTCCTTCGGCGGCGTGCTGGCCGAGCCGGCCCGCCCGCTGCCGGCCGGGGCGGAGCCGGGAACCGGCCGGCCGTCGCCG GGAGCGGCCGCGGGGACGGGGCCCGGTCCCGACGGGCGCGCCGAGGGGGTTACGGGAGCCGCTCCCGCTCAGACTGCGGC ATCCGCGGCAGGCACCGGCCCGGCTCCGGACCCCGGGCCCGCCGGAGGACCACCCACGGGCCCGGACGCCGGCACACGTT CCGGAGATCTGCAGGCGGCCGGCTCGCGCGGGCCGGTGGATCCGGGGACCGGGGCCGCCCGCCTGGCATCCGGCGCCGGC GCGCAGCCGGGAGAAGGGACGCACGGAAGAGCGGGAGGCTCGTGGCTGCACCGGGCGCTGGCGCGGCTGCGCGTGCGGCC CTCGCTGCCTGATCCGGCGACGCTGCCGCCGCAAGCGCCGCCCAACCCCGCCAGGCCGCTGAGCGCGCTGGCGCCCGAGG ACTGGGTCCGCACCGAAGAGGAGCTGGGCCACCCGTGA
Upstream 100 bases:
>100_bases AGCGATATTCTGGCGGCAATGACAAGCCGCGAGGGAGTTTCTTCCCAGGGTTTGGTTACACTAACGGGGACTGATCGCTG CGACGTTCGGGGGGTATGAC
Downstream 100 bases:
>100_bases CCGGGCAGGGCAAGCCGCCTGCCCCGGGGTGGGCGGCCAAGCTGACCCGCGCCCTGCGGGAAGGGCGCGGGGTGCGGCTG GGTGAGGCGGCGGTGGTGAG
Product: putative chelatase
Products: NA
Alternate protein names: Mg-protoporphyrin IX chelatase [H]
Number of amino acids: Translated: 545; Mature: 545
Protein sequence:
>545_residues MESVFGLVRHPGNDALFRAVEMSLVSTLAGRPLHIHAEGLRGTGKTTIMRRVRKALPRIRRIRGCLYNCDPSAPHCPVHR GLSPEEVAALGEERVPMPFLEISHAAKIGTVVGSIDLSRLVSATHPEAALLPGTIPQAHRGILFVDEINRLAETSPELAD VLLDVMGTRPGRVQIEETGLPPVELPVLVSVWAASNPDEEPGPLEEIRRQLSDRFDFAIYTDRPSDPEVVEQILAAAEAG EARPPRIADTKAELWRTRLTLRTADLRQVTIPPGIRRQVAALYSQFDLESLRGVEAIQAGIRLSACLDGRREVQPEDLLR VVPMALRHRVDPELLRRVTSYLAEGLAPAETPAPLAAASGGPATAPGRTRFPGLSFGGVLAEPARPLPAGAEPGTGRPSP GAAAGTGPGPDGRAEGVTGAAPAQTAASAAGTGPAPDPGPAGGPPTGPDAGTRSGDLQAAGSRGPVDPGTGAARLASGAG AQPGEGTHGRAGGSWLHRALARLRVRPSLPDPATLPPQAPPNPARPLSALAPEDWVRTEEELGHP
Sequences:
>Translated_545_residues MESVFGLVRHPGNDALFRAVEMSLVSTLAGRPLHIHAEGLRGTGKTTIMRRVRKALPRIRRIRGCLYNCDPSAPHCPVHR GLSPEEVAALGEERVPMPFLEISHAAKIGTVVGSIDLSRLVSATHPEAALLPGTIPQAHRGILFVDEINRLAETSPELAD VLLDVMGTRPGRVQIEETGLPPVELPVLVSVWAASNPDEEPGPLEEIRRQLSDRFDFAIYTDRPSDPEVVEQILAAAEAG EARPPRIADTKAELWRTRLTLRTADLRQVTIPPGIRRQVAALYSQFDLESLRGVEAIQAGIRLSACLDGRREVQPEDLLR VVPMALRHRVDPELLRRVTSYLAEGLAPAETPAPLAAASGGPATAPGRTRFPGLSFGGVLAEPARPLPAGAEPGTGRPSP GAAAGTGPGPDGRAEGVTGAAPAQTAASAAGTGPAPDPGPAGGPPTGPDAGTRSGDLQAAGSRGPVDPGTGAARLASGAG AQPGEGTHGRAGGSWLHRALARLRVRPSLPDPATLPPQAPPNPARPLSALAPEDWVRTEEELGHP >Mature_545_residues MESVFGLVRHPGNDALFRAVEMSLVSTLAGRPLHIHAEGLRGTGKTTIMRRVRKALPRIRRIRGCLYNCDPSAPHCPVHR GLSPEEVAALGEERVPMPFLEISHAAKIGTVVGSIDLSRLVSATHPEAALLPGTIPQAHRGILFVDEINRLAETSPELAD VLLDVMGTRPGRVQIEETGLPPVELPVLVSVWAASNPDEEPGPLEEIRRQLSDRFDFAIYTDRPSDPEVVEQILAAAEAG EARPPRIADTKAELWRTRLTLRTADLRQVTIPPGIRRQVAALYSQFDLESLRGVEAIQAGIRLSACLDGRREVQPEDLLR VVPMALRHRVDPELLRRVTSYLAEGLAPAETPAPLAAASGGPATAPGRTRFPGLSFGGVLAEPARPLPAGAEPGTGRPSP GAAAGTGPGPDGRAEGVTGAAPAQTAASAAGTGPAPDPGPAGGPPTGPDAGTRSGDLQAAGSRGPVDPGTGAARLASGAG AQPGEGTHGRAGGSWLHRALARLRVRPSLPDPATLPPQAPPNPARPLSALAPEDWVRTEEELGHP
Specific function: Involved in bacteriochlorophyll biosynthesis; introduces a magnesium ion into protoporphyrin IX to yield Mg-protoporphyrin IX [H]
COG id: COG1239
COG function: function code H; Mg-chelatase subunit ChlI
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the Mg-chelatase subunits D/I family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003593 - InterPro: IPR011775 - InterPro: IPR000523 [H]
Pfam domain/function: PF01078 Mg_chelatase [H]
EC number: =6.6.1.1 [H]
Molecular weight: Translated: 57006; Mature: 57006
Theoretical pI: Translated: 6.66; Mature: 6.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MESVFGLVRHPGNDALFRAVEMSLVSTLAGRPLHIHAEGLRGTGKTTIMRRVRKALPRIR CCCHHHHHHCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHH RIRGCLYNCDPSAPHCPVHRGLSPEEVAALGEERVPMPFLEISHAAKIGTVVGSIDLSRL HHHHHHCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH VSATHPEAALLPGTIPQAHRGILFVDEINRLAETSPELADVLLDVMGTRPGRVQIEETGL HHCCCCCCCCCCCCCCHHHCCEEEHHHHHHHHHCCHHHHHHHHHHHCCCCCEEEEECCCC PPVELPVLVSVWAASNPDEEPGPLEEIRRQLSDRFDFAIYTDRPSDPEVVEQILAAAEAG CCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHHCC EARPPRIADTKAELWRTRLTLRTADLRQVTIPPGIRRQVAALYSQFDLESLRGVEAIQAG CCCCCCCCCHHHHHHHHHHHEEECCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHH IRLSACLDGRREVQPEDLLRVVPMALRHRVDPELLRRVTSYLAEGLAPAETPAPLAAASG HHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCEECCC GPATAPGRTRFPGLSFGGVLAEPARPLPAGAEPGTGRPSPGAAAGTGPGPDGRAEGVTGA CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC APAQTAASAAGTGPAPDPGPAGGPPTGPDAGTRSGDLQAAGSRGPVDPGTGAARLASGAG CCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCC AQPGEGTHGRAGGSWLHRALARLRVRPSLPDPATLPPQAPPNPARPLSALAPEDWVRTEE CCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHCCCHHHHCCHH ELGHP HCCCC >Mature Secondary Structure MESVFGLVRHPGNDALFRAVEMSLVSTLAGRPLHIHAEGLRGTGKTTIMRRVRKALPRIR CCCHHHHHHCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHH RIRGCLYNCDPSAPHCPVHRGLSPEEVAALGEERVPMPFLEISHAAKIGTVVGSIDLSRL HHHHHHCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH VSATHPEAALLPGTIPQAHRGILFVDEINRLAETSPELADVLLDVMGTRPGRVQIEETGL HHCCCCCCCCCCCCCCHHHCCEEEHHHHHHHHHCCHHHHHHHHHHHCCCCCEEEEECCCC PPVELPVLVSVWAASNPDEEPGPLEEIRRQLSDRFDFAIYTDRPSDPEVVEQILAAAEAG CCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHHCC EARPPRIADTKAELWRTRLTLRTADLRQVTIPPGIRRQVAALYSQFDLESLRGVEAIQAG CCCCCCCCCHHHHHHHHHHHEEECCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHH IRLSACLDGRREVQPEDLLRVVPMALRHRVDPELLRRVTSYLAEGLAPAETPAPLAAASG HHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCEECCC GPATAPGRTRFPGLSFGGVLAEPARPLPAGAEPGTGRPSPGAAAGTGPGPDGRAEGVTGA CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC APAQTAASAAGTGPAPDPGPAGGPPTGPDAGTRSGDLQAAGSRGPVDPGTGAARLASGAG CCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCC AQPGEGTHGRAGGSWLHRALARLRVRPSLPDPATLPPQAPPNPARPLSALAPEDWVRTEE CCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHCCCHHHHCCHH ELGHP HCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10559247 [H]