| Definition | Symbiobacterium thermophilum IAM 14863 chromosome, complete genome. |
|---|---|
| Accession | NC_006177 |
| Length | 3,566,135 |
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The map label for this gene is 51893578
Identifier: 51893578
GI number: 51893578
Start: 2625920
End: 2628145
Strand: Reverse
Name: 51893578
Synonym: STH2440
Alternate gene names: NA
Gene position: 2628145-2625920 (Counterclockwise)
Preceding gene: 51893579
Following gene: 51893577
Centisome position: 73.7
GC content: 77.04
Gene sequence:
>2226_bases GTGACCGGGCAGGGCAAGCCGCCTGCCCCGGGGTGGGCGGCCAAGCTGACCCGCGCCCTGCGGGAAGGGCGCGGGGTGCG GCTGGGTGAGGCGGCGGTGGTGAGCCGGGGCCTGCACGTGGTGGAGCTGCACGATCCGGGCCGGGTCGTCATCCTGCGGG GCGTCGACTTCGGACAGGCCGCGTACGGGCTGGCCGAGCCCGGGCAGGTGGTGCACATCGACGTGTTCCACGCGGTGGCC GACGTCGATCACCGCACCGTCGCGGCGGCGGTCCGGCGGGCGCTGGAAGGGCTCCCCGCCCCGCCGGGTCCCGGGCCCGG CCGGCTGCTCGCGGACTACTTCGACGTGGGGACCGCCACCGGCGGCGGCCGGCTGACCAGCGCCATGGACCGGATGGCCA ACCGCTCTGCCAAGGCGGCCCACCGCAACCACGTCCACCTGGCCGGCCTGCTGCCGGACCGGGACCTGGCCCTGGTGTGG CGCATCGTCGCCGCGGTGGAGGCCGCCGTCCTGGCGCAGGGGGTGGAGCTGCGCCGGATCGACCGGCTGGTGCACCGGTG GGGCGGCCTGCGGCCCGGCGCCGACGCGGACCTGAGCCGCTATTACGGGGACAACCTCGACTCCTACATCAACCGGGCGC CTGCCGGCGGGCCGCCGGGACGGGGGGCGGGGCCCGGTTCCTCCGGCTGGCGGGGCAGGCGGGCCCCGGCCGCGCCGAGC CTCGGCGGAGCCGCCCGCCCGGCTGACAGGGCCCCCGGCGCCGCTCCCATGAGCGGCGGGCCGGACAGCCTGAGGGGGAG TTACCCCGGCGCCGGTTCGGACGTCGGCGGCCCGGACGGCCCGGGGGGTGCGGCCCCGGGAGTCGTTCGGGGCGGCGGAG GACTGGACGGATCCGGGGGCGAGGGGACGGGCGCCGTTCGGGGAGGCGTCGGACGGGGCAGCTCAGGGGGCGGGGCCCCG GGGGCCGGCACGGCGGGCGTCGGTTCGGCACGGGAGCCGGTCCCGGGGTCCGGCACACGGGGGACCGGAGACGGCTCCCC AGCGGGTGATCCGGACGCCGGCACCGGCCCCGGCCCCGCCCCGGAGGAGCGCGCCGCCCGCGCCCTGCGGGAGGCCCGGG AGGCCGAGCGGATGCTGCAGGCGCTGACCCTCGCCCGCAGCGTGGGCTCGCCCGACGACCTGGCGCGCGTCCTGGAGGAC CTGGACCGGGAGAAGGGGTGGGCGGCTCTCTACCACGGCGAAGGCAACCAGGCGCCGTTCGTCCTGCGGCAGCTGGAGGA GGCCGGGCTTATCCGCCGGGAGATGCGGGGCATGCGGCTCACGCCGGAGGGGAAGGAGCTGCTGGCGTTTCTGCGCAGCC GGCTCAGGGACGTGAAGCTGCGCTTCCGCAAGCTGATCCGGCGGGTGCCCGGCCGCAGCGCTCCGGGGCTGCGGCGCCGG CGTCCCGGACAAGGGACCCCTTCCCCGGAGGTGCGCTACGGCGTGATCAGGGGCGCGGCGCCCGCCGAGCCCGGGGCCTG GCTGGGCGACCTGGCCGTGCCGGAGACGGTTCTGGCGGCCATCCGGCGCGCCTGGCTGGCGCGGGCCCGCCGGTCCGCCG CGGGCGCCCCGGCGGAAGGGCCGGTCCCCATCCGGCTGGAGCGTAGGGACGTCCACGTCCACCTGCGGTCGGCGGAGCAG TCGCTGGACATCTGCCTGCTCATCGACGCCAGCGCCTCCATGGCCGGCCGGCGCATCCTGGCGGCCAAGCACCTGGCCCG GCACCTGCTGGTCTCCACGCGCGACCGCATCGCTGTGATCGCCTTCCAGGAGCGGGACGTGCGGGTCTACGTGCCCTTCA CCCGCAGTTACAGCGCCGTGGAGGACGGGCTCGCCCGCATCCAGCCGATGGGGCTCACGCCGCTGGCGCACGGCCTCATC CGTTCCATGGAGCTGATCCACAGCGCGCGGGTCCGCAGGCCGCTGCTGCTCCTGATCACCGACGGCATCCCCACCGTCCC GAAGTGGTCCGTGGATCCGCTGGCCGACGCCGTCGAGGCCGCCCGGCAGCTCCGGGCGCAGCGGATCCCCTTCACCTGCA TCGGGCTCCAGCCCTCCCGCCGGTACCTGGAGCAGCTCGTCCGGCAGGCCGGCGGCACCCTGCACGTGGTGGATGAGCTG TCGGAGGAGTCGCTGATCCGCATCGCGCACCACGAGCGGCAGAGGCTGGCGCCGCACGTCCCGTGA
Upstream 100 bases:
>100_bases CGGCGACGCTGCCGCCGCAAGCGCCGCCCAACCCCGCCAGGCCGCTGAGCGCGCTGGCGCCCGAGGACTGGGTCCGCACC GAAGAGGAGCTGGGCCACCC
Downstream 100 bases:
>100_bases CGCGGCAGGGATCGAACGCGACCGTCTCGAAAAGAGAAGGGTCCGAACGATCATGTGCCCCCCGTCAGCCGCTCGCTGCG GGGGGCCGCACATGGTTTGC
Product: magnesium chelatase
Products: NA
Alternate protein names: Magnesium Chelatase; Cobaltochelatase Subunit-Like Protein; Cobaltochelatase Subunit; Magnesium Chelatase Subunit; Mg-Chelatase Subunit ChlD-Like Protein
Number of amino acids: Translated: 741; Mature: 740
Protein sequence:
>741_residues MTGQGKPPAPGWAAKLTRALREGRGVRLGEAAVVSRGLHVVELHDPGRVVILRGVDFGQAAYGLAEPGQVVHIDVFHAVA DVDHRTVAAAVRRALEGLPAPPGPGPGRLLADYFDVGTATGGGRLTSAMDRMANRSAKAAHRNHVHLAGLLPDRDLALVW RIVAAVEAAVLAQGVELRRIDRLVHRWGGLRPGADADLSRYYGDNLDSYINRAPAGGPPGRGAGPGSSGWRGRRAPAAPS LGGAARPADRAPGAAPMSGGPDSLRGSYPGAGSDVGGPDGPGGAAPGVVRGGGGLDGSGGEGTGAVRGGVGRGSSGGGAP GAGTAGVGSAREPVPGSGTRGTGDGSPAGDPDAGTGPGPAPEERAARALREAREAERMLQALTLARSVGSPDDLARVLED LDREKGWAALYHGEGNQAPFVLRQLEEAGLIRREMRGMRLTPEGKELLAFLRSRLRDVKLRFRKLIRRVPGRSAPGLRRR RPGQGTPSPEVRYGVIRGAAPAEPGAWLGDLAVPETVLAAIRRAWLARARRSAAGAPAEGPVPIRLERRDVHVHLRSAEQ SLDICLLIDASASMAGRRILAAKHLARHLLVSTRDRIAVIAFQERDVRVYVPFTRSYSAVEDGLARIQPMGLTPLAHGLI RSMELIHSARVRRPLLLLITDGIPTVPKWSVDPLADAVEAARQLRAQRIPFTCIGLQPSRRYLEQLVRQAGGTLHVVDEL SEESLIRIAHHERQRLAPHVP
Sequences:
>Translated_741_residues MTGQGKPPAPGWAAKLTRALREGRGVRLGEAAVVSRGLHVVELHDPGRVVILRGVDFGQAAYGLAEPGQVVHIDVFHAVA DVDHRTVAAAVRRALEGLPAPPGPGPGRLLADYFDVGTATGGGRLTSAMDRMANRSAKAAHRNHVHLAGLLPDRDLALVW RIVAAVEAAVLAQGVELRRIDRLVHRWGGLRPGADADLSRYYGDNLDSYINRAPAGGPPGRGAGPGSSGWRGRRAPAAPS LGGAARPADRAPGAAPMSGGPDSLRGSYPGAGSDVGGPDGPGGAAPGVVRGGGGLDGSGGEGTGAVRGGVGRGSSGGGAP GAGTAGVGSAREPVPGSGTRGTGDGSPAGDPDAGTGPGPAPEERAARALREAREAERMLQALTLARSVGSPDDLARVLED LDREKGWAALYHGEGNQAPFVLRQLEEAGLIRREMRGMRLTPEGKELLAFLRSRLRDVKLRFRKLIRRVPGRSAPGLRRR RPGQGTPSPEVRYGVIRGAAPAEPGAWLGDLAVPETVLAAIRRAWLARARRSAAGAPAEGPVPIRLERRDVHVHLRSAEQ SLDICLLIDASASMAGRRILAAKHLARHLLVSTRDRIAVIAFQERDVRVYVPFTRSYSAVEDGLARIQPMGLTPLAHGLI RSMELIHSARVRRPLLLLITDGIPTVPKWSVDPLADAVEAARQLRAQRIPFTCIGLQPSRRYLEQLVRQAGGTLHVVDEL SEESLIRIAHHERQRLAPHVP >Mature_740_residues TGQGKPPAPGWAAKLTRALREGRGVRLGEAAVVSRGLHVVELHDPGRVVILRGVDFGQAAYGLAEPGQVVHIDVFHAVAD VDHRTVAAAVRRALEGLPAPPGPGPGRLLADYFDVGTATGGGRLTSAMDRMANRSAKAAHRNHVHLAGLLPDRDLALVWR IVAAVEAAVLAQGVELRRIDRLVHRWGGLRPGADADLSRYYGDNLDSYINRAPAGGPPGRGAGPGSSGWRGRRAPAAPSL GGAARPADRAPGAAPMSGGPDSLRGSYPGAGSDVGGPDGPGGAAPGVVRGGGGLDGSGGEGTGAVRGGVGRGSSGGGAPG AGTAGVGSAREPVPGSGTRGTGDGSPAGDPDAGTGPGPAPEERAARALREAREAERMLQALTLARSVGSPDDLARVLEDL DREKGWAALYHGEGNQAPFVLRQLEEAGLIRREMRGMRLTPEGKELLAFLRSRLRDVKLRFRKLIRRVPGRSAPGLRRRR PGQGTPSPEVRYGVIRGAAPAEPGAWLGDLAVPETVLAAIRRAWLARARRSAAGAPAEGPVPIRLERRDVHVHLRSAEQS LDICLLIDASASMAGRRILAAKHLARHLLVSTRDRIAVIAFQERDVRVYVPFTRSYSAVEDGLARIQPMGLTPLAHGLIR SMELIHSARVRRPLLLLITDGIPTVPKWSVDPLADAVEAARQLRAQRIPFTCIGLQPSRRYLEQLVRQAGGTLHVVDELS EESLIRIAHHERQRLAPHVP
Specific function: Unknown
COG id: COG1240
COG function: function code H; Mg-chelatase subunit ChlD
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 77994; Mature: 77863
Theoretical pI: Translated: 11.37; Mature: 11.37
Prosite motif: PS50234 VWFA ; PS00482 DIHYDROOROTASE_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGQGKPPAPGWAAKLTRALREGRGVRLGEAAVVSRGLHVVELHDPGRVVILRGVDFGQA CCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHCCCEEEEEECCCCEEEEECCCCCHH AYGLAEPGQVVHIDVFHAVADVDHRTVAAAVRRALEGLPAPPGPGPGRLLADYFDVGTAT HHCCCCCCCEEEEEHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCC GGGRLTSAMDRMANRSAKAAHRNHVHLAGLLPDRDLALVWRIVAAVEAAVLAQGVELRRI CCCHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHCCHHHHHH DRLVHRWGGLRPGADADLSRYYGDNLDSYINRAPAGGPPGRGAGPGSSGWRGRRAPAAPS HHHHHHHCCCCCCCCCHHHHHHCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC LGGAARPADRAPGAAPMSGGPDSLRGSYPGAGSDVGGPDGPGGAAPGVVRGGGGLDGSGG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCC EGTGAVRGGVGRGSSGGGAPGAGTAGVGSAREPVPGSGTRGTGDGSPAGDPDAGTGPGPA CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PEERAARALREAREAERMLQALTLARSVGSPDDLARVLEDLDREKGWAALYHGEGNQAPF CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCHH VLRQLEEAGLIRREMRGMRLTPEGKELLAFLRSRLRDVKLRFRKLIRRVPGRSAPGLRRR HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHC RPGQGTPSPEVRYGVIRGAAPAEPGAWLGDLAVPETVLAAIRRAWLARARRSAAGAPAEG CCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCC PVPIRLERRDVHVHLRSAEQSLDICLLIDASASMAGRRILAAKHLARHLLVSTRDRIAVI CEEEEEECCEEEEEEECCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCEEEE AFQERDVRVYVPFTRSYSAVEDGLARIQPMGLTPLAHGLIRSMELIHSARVRRPLLLLIT EEECCCEEEEECCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEE DGIPTVPKWSVDPLADAVEAARQLRAQRIPFTCIGLQPSRRYLEQLVRQAGGTLHVVDEL CCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHCCCEEEEHHHC SEESLIRIAHHERQRLAPHVP CHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure TGQGKPPAPGWAAKLTRALREGRGVRLGEAAVVSRGLHVVELHDPGRVVILRGVDFGQA CCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHCCCEEEEEECCCCEEEEECCCCCHH AYGLAEPGQVVHIDVFHAVADVDHRTVAAAVRRALEGLPAPPGPGPGRLLADYFDVGTAT HHCCCCCCCEEEEEHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCC GGGRLTSAMDRMANRSAKAAHRNHVHLAGLLPDRDLALVWRIVAAVEAAVLAQGVELRRI CCCHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHCCHHHHHH DRLVHRWGGLRPGADADLSRYYGDNLDSYINRAPAGGPPGRGAGPGSSGWRGRRAPAAPS HHHHHHHCCCCCCCCCHHHHHHCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC LGGAARPADRAPGAAPMSGGPDSLRGSYPGAGSDVGGPDGPGGAAPGVVRGGGGLDGSGG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCC EGTGAVRGGVGRGSSGGGAPGAGTAGVGSAREPVPGSGTRGTGDGSPAGDPDAGTGPGPA CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PEERAARALREAREAERMLQALTLARSVGSPDDLARVLEDLDREKGWAALYHGEGNQAPF CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCHH VLRQLEEAGLIRREMRGMRLTPEGKELLAFLRSRLRDVKLRFRKLIRRVPGRSAPGLRRR HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHC RPGQGTPSPEVRYGVIRGAAPAEPGAWLGDLAVPETVLAAIRRAWLARARRSAAGAPAEG CCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCC PVPIRLERRDVHVHLRSAEQSLDICLLIDASASMAGRRILAAKHLARHLLVSTRDRIAVI CEEEEEECCEEEEEEECCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCEEEE AFQERDVRVYVPFTRSYSAVEDGLARIQPMGLTPLAHGLIRSMELIHSARVRRPLLLLIT EEECCCEEEEECCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEE DGIPTVPKWSVDPLADAVEAARQLRAQRIPFTCIGLQPSRRYLEQLVRQAGGTLHVVDEL CCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHCCCEEEEHHHC SEESLIRIAHHERQRLAPHVP CHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA