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The map label for this gene is recJ [H]

Identifier: 51893577

GI number: 51893577

Start: 2623242

End: 2625803

Strand: Reverse

Name: recJ [H]

Synonym: STH2439

Alternate gene names: 51893577

Gene position: 2625803-2623242 (Counterclockwise)

Preceding gene: 51893578

Following gene: 51893576

Centisome position: 73.63

GC content: 74.0

Gene sequence:

>2562_bases
GTGGCGCGACCCTACCGACCCAAACGCTGGCGGCCGGAGCCGGCGGACCCGGCCGGCGCCCGGCTCCTTTCCCGGCAGCT
CTCGATCTCGCCCGTCACCGCGCAGGTGCTGATCAACCGCGGGCTCACCACGCCCGAGGCGGCCCAGGCGTTCCTGACGC
CGGGGCGCGACCGGATCCACGATCCCTTCCTCCTGAAGGACATGCGGGAAGCCGTCGACCTGATCCGGGCGCGCCTCCGC
TCGGGCGGGCCCATCATGGTCTACGGCGACTACGACGCCGACGGGGTGACCGCCACGGCCACGCTCCTCCTGGCCTTGCG
CGCCCTCGGGGCGGAAGTGGCGTATTACATACCGGACCGCTTCCGCGAGGGGTACGGCCTCAACGCCGGGGCGCTTCGGT
CCATCCGCGCGCGCGGGTACGACTTCATCGTGACGGTCGACACCGGCGTCGCCGCCGTGGCCGAGGCGCAGGTGGCCCGG
GAACTGGGCATCACCCTGGTGGTCACCGACCACCACGAGCCCGGCCCGGTGCTGCCCGACGTGCCGGCCCTGGTGAACCC
CAGGCGGCCGGACTGCACGTATCCCTTCAAGGGGCTCGCCGGGGTGGGGGTCGCGTTCAAGCTGGCGCTGGCCCTGGGCG
CCCCCAACGCGTGGGACCTGCTGGACATCGTGACCCTGGGCACCGTGGCGGACATGATGCCGCTGGTGGACGAGAACCGG
GCCATCGTCCGGGAGGGGCTGTCCCGCCTGGGCGCGACCCATCGGCCGGGCCTGCGGGCGCTCATGCAGGTTGCCGGCGT
GCAGCCGCCCGTCACCGCCGGGCACGTCGGATTCGCCCTGGGGCCCCGGATCAACGCCCTGGGCCGCATGAGCTCGGCGG
AGGCCGGGGTCGAGCTGCTCCTGACCGAGGATCCGGCGCGGGCCGAGGAACTGGCCCGGCGGCTGGACGAGGAGAATCGG
GCCCGGCAGGAGATCGAGGCGGCGATCCTGGAGGAGGCCCTGGCCCAGGCGGCCGCGCTGCCGCCGGAGGAGCGGGAGTA
TGCCCTGGTCCTGGCGGGCGAGGGCTGGCACCACGGCGTGGTCGGCATCTGCGCCTCCCGCGTGCTGGAGGTCTACCATC
GGCCGACGATCCTGCTCTCCATCGAGGGGGACGAGGTTCGGGGGTCCGCCCGGTCGATCCCGGGGTTTCACATGCAGCGG
GCGCTGCTGCAGATGAGCGAGCTGTTCACCCGCTTCGGCGGGCATGCGGCGGCGGCGGGCCTGAGTCTGAGGGGGCGGGA
CCTGGTGCCGGAGCTGCGCAGGCGGATGAACCGGCTGGCGGCCGAATGGCTGCGGCCGGAGGACCTGGTGCCCGAGCAGC
GGGTCGATGCCTTCGTCGCCCTGGACCAGATCGACGAGGGGCTGATCCGGGAGCTGGAGGCCCTGGAGCCCTTCGGCCTG
GGCAACCCGGCGCCGGTGCTGGCGACGGACGGGCTGCAGGTCGTGGACGGCCGGGCCATTGGCCGGAACGGCCAGCACCT
GAAGCTGTTCCTCCGGCCCGACGGCGACGGGGCGGCGGCCCCCGTGGAGGCGGTGGGCTGGAACATGGCGGTCGCCATGC
CCGAACCGGGCCGGCGGATTGCGGTGGCCTACGAACCGGAGATCAACACCTACATGGGCCGCAGCCGGATCCAGCTGGTG
CTGAAGGACATGAAGCCGGCCGCGGGCGGAGAGCCCTTCCGCCTGACCGACGCCCACTGCCTGGCCTGGGATCCGCTCTC
CCCCTCGGTGAACGGCGCCCCGGCCGGCTTTCCGGTGCACGTTGTCGACGCCCGGGGCGGGCGGCTGGCCGGCCTGCTGG
CGGCGATGGCGGGGGCAGGCCCGGCTCCCGGCGCCAGGGAGGTGGCGGCGGAGATGGAGGACGAGTGGGGCGCTGACGGC
GAGGAGGCGGACCCCAAGCTCCTTTACCTGGCAGCGCTCTGCCGGCCGGCCGAAGCCCGGGCGCTGGTGCTGACGGCGAG
CCCGTGGGCCGCGGCGGCGCTCGCGGACCGGTTGGAGCGGCTCGGCCCGGAGACCCGCCGCACGGTGGCCCTCTGGCTTC
CGGGGGAACCGGAACCCGCGGCCGGTCGCCTGGTGGTGGCCGCCCACGGCCAGGTGGCCCGGGGACCGTACAGCGACGTC
GTCCTCTGGCATCCGCCGTACGCGGCGGTCGGATACCCGGCCGAGCGGCTCCACCTGCTGTGGGACGAACAGGACTGGGC
CCTCGCGGAGGAATGCCTGGGTTGGCCGTGCCCCGACCGGGACGTGCTGGTGCATCTGTACAGGCTTCTGCAGACCGGGG
AGGCGAGCCCGTCGACCCTGGCGCGGCGGCTGAACGAGGTTCCCGGACCGTGGAACCGACTGCGCTACGAGAGCGGCCTG
GCGATCTTCCGGGAGATCGGGCTGCTGGACGGCGCAGGGCGGCTCTGTGCGGCCCGCGGCGTGCGCTTTGACCTGGAGGC
GAGCCCGCGCTATCGGCGGGGCCAGGAGGTCCGGGCGCTGCTCGCCGCACGGCAGACGTTTCCGGGTTCTGCATCGGCCT
GA

Upstream 100 bases:

>100_bases
CGCGACCGTCTCGAAAAGAGAAGGGTCCGAACGATCATGTGCCCCCCGTCAGCCGCTCGCTGCGGGGGGCCGCACATGGT
TTGCAGGGAGTGAACGCGGG

Downstream 100 bases:

>100_bases
GTCACAAGTGTTGGCCGACGGCGAACCAGGCAATATAATTGATGTATGAGGGGGCTAAGATTGATGGATTTCAAGTCGAA
GATCCGCACCGTAGACGATT

Product: single-strand DNA-specific exonuclease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 853; Mature: 852

Protein sequence:

>853_residues
MARPYRPKRWRPEPADPAGARLLSRQLSISPVTAQVLINRGLTTPEAAQAFLTPGRDRIHDPFLLKDMREAVDLIRARLR
SGGPIMVYGDYDADGVTATATLLLALRALGAEVAYYIPDRFREGYGLNAGALRSIRARGYDFIVTVDTGVAAVAEAQVAR
ELGITLVVTDHHEPGPVLPDVPALVNPRRPDCTYPFKGLAGVGVAFKLALALGAPNAWDLLDIVTLGTVADMMPLVDENR
AIVREGLSRLGATHRPGLRALMQVAGVQPPVTAGHVGFALGPRINALGRMSSAEAGVELLLTEDPARAEELARRLDEENR
ARQEIEAAILEEALAQAAALPPEEREYALVLAGEGWHHGVVGICASRVLEVYHRPTILLSIEGDEVRGSARSIPGFHMQR
ALLQMSELFTRFGGHAAAAGLSLRGRDLVPELRRRMNRLAAEWLRPEDLVPEQRVDAFVALDQIDEGLIRELEALEPFGL
GNPAPVLATDGLQVVDGRAIGRNGQHLKLFLRPDGDGAAAPVEAVGWNMAVAMPEPGRRIAVAYEPEINTYMGRSRIQLV
LKDMKPAAGGEPFRLTDAHCLAWDPLSPSVNGAPAGFPVHVVDARGGRLAGLLAAMAGAGPAPGAREVAAEMEDEWGADG
EEADPKLLYLAALCRPAEARALVLTASPWAAAALADRLERLGPETRRTVALWLPGEPEPAAGRLVVAAHGQVARGPYSDV
VLWHPPYAAVGYPAERLHLLWDEQDWALAEECLGWPCPDRDVLVHLYRLLQTGEASPSTLARRLNEVPGPWNRLRYESGL
AIFREIGLLDGAGRLCAARGVRFDLEASPRYRRGQEVRALLAARQTFPGSASA

Sequences:

>Translated_853_residues
MARPYRPKRWRPEPADPAGARLLSRQLSISPVTAQVLINRGLTTPEAAQAFLTPGRDRIHDPFLLKDMREAVDLIRARLR
SGGPIMVYGDYDADGVTATATLLLALRALGAEVAYYIPDRFREGYGLNAGALRSIRARGYDFIVTVDTGVAAVAEAQVAR
ELGITLVVTDHHEPGPVLPDVPALVNPRRPDCTYPFKGLAGVGVAFKLALALGAPNAWDLLDIVTLGTVADMMPLVDENR
AIVREGLSRLGATHRPGLRALMQVAGVQPPVTAGHVGFALGPRINALGRMSSAEAGVELLLTEDPARAEELARRLDEENR
ARQEIEAAILEEALAQAAALPPEEREYALVLAGEGWHHGVVGICASRVLEVYHRPTILLSIEGDEVRGSARSIPGFHMQR
ALLQMSELFTRFGGHAAAAGLSLRGRDLVPELRRRMNRLAAEWLRPEDLVPEQRVDAFVALDQIDEGLIRELEALEPFGL
GNPAPVLATDGLQVVDGRAIGRNGQHLKLFLRPDGDGAAAPVEAVGWNMAVAMPEPGRRIAVAYEPEINTYMGRSRIQLV
LKDMKPAAGGEPFRLTDAHCLAWDPLSPSVNGAPAGFPVHVVDARGGRLAGLLAAMAGAGPAPGAREVAAEMEDEWGADG
EEADPKLLYLAALCRPAEARALVLTASPWAAAALADRLERLGPETRRTVALWLPGEPEPAAGRLVVAAHGQVARGPYSDV
VLWHPPYAAVGYPAERLHLLWDEQDWALAEECLGWPCPDRDVLVHLYRLLQTGEASPSTLARRLNEVPGPWNRLRYESGL
AIFREIGLLDGAGRLCAARGVRFDLEASPRYRRGQEVRALLAARQTFPGSASA
>Mature_852_residues
ARPYRPKRWRPEPADPAGARLLSRQLSISPVTAQVLINRGLTTPEAAQAFLTPGRDRIHDPFLLKDMREAVDLIRARLRS
GGPIMVYGDYDADGVTATATLLLALRALGAEVAYYIPDRFREGYGLNAGALRSIRARGYDFIVTVDTGVAAVAEAQVARE
LGITLVVTDHHEPGPVLPDVPALVNPRRPDCTYPFKGLAGVGVAFKLALALGAPNAWDLLDIVTLGTVADMMPLVDENRA
IVREGLSRLGATHRPGLRALMQVAGVQPPVTAGHVGFALGPRINALGRMSSAEAGVELLLTEDPARAEELARRLDEENRA
RQEIEAAILEEALAQAAALPPEEREYALVLAGEGWHHGVVGICASRVLEVYHRPTILLSIEGDEVRGSARSIPGFHMQRA
LLQMSELFTRFGGHAAAAGLSLRGRDLVPELRRRMNRLAAEWLRPEDLVPEQRVDAFVALDQIDEGLIRELEALEPFGLG
NPAPVLATDGLQVVDGRAIGRNGQHLKLFLRPDGDGAAAPVEAVGWNMAVAMPEPGRRIAVAYEPEINTYMGRSRIQLVL
KDMKPAAGGEPFRLTDAHCLAWDPLSPSVNGAPAGFPVHVVDARGGRLAGLLAAMAGAGPAPGAREVAAEMEDEWGADGE
EADPKLLYLAALCRPAEARALVLTASPWAAAALADRLERLGPETRRTVALWLPGEPEPAAGRLVVAAHGQVARGPYSDVV
LWHPPYAAVGYPAERLHLLWDEQDWALAEECLGWPCPDRDVLVHLYRLLQTGEASPSTLARRLNEVPGPWNRLRYESGLA
IFREIGLLDGAGRLCAARGVRFDLEASPRYRRGQEVRALLAARQTFPGSASA

Specific function: Putative single-stranded-DNA-specific exonuclease. RecA thread formation during DNA double-strand break repair requires RecJ or AadAB [H]

COG id: COG0608

COG function: function code L; Single-stranded DNA-specific exonuclease

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 OB DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1789259, Length=530, Percent_Identity=39.0566037735849, Blast_Score=321, Evalue=1e-88,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003156
- InterPro:   IPR001667
- InterPro:   IPR004610
- InterPro:   IPR018779 [H]

Pfam domain/function: PF01368 DHH; PF02272 DHHA1; PF10141 ssDNA-exonuc_C [H]

EC number: 3.1.-.- [C]

Molecular weight: Translated: 92048; Mature: 91916

Theoretical pI: Translated: 5.90; Mature: 5.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARPYRPKRWRPEPADPAGARLLSRQLSISPVTAQVLINRGLTTPEAAQAFLTPGRDRIH
CCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHCCCCCHHHHHHHHCCCHHHCC
DPFLLKDMREAVDLIRARLRSGGPIMVYGDYDADGVTATATLLLALRALGAEVAYYIPDR
CCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCEEEECCHH
FREGYGLNAGALRSIRARGYDFIVTVDTGVAAVAEAQVARELGITLVVTDHHEPGPVLPD
HHCCCCCCHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCC
VPALVNPRRPDCTYPFKGLAGVGVAFKLALALGAPNAWDLLDIVTLGTVADMMPLVDENR
CCHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCH
AIVREGLSRLGATHRPGLRALMQVAGVQPPVTAGHVGFALGPRINALGRMSSAEAGVELL
HHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCEECCCCHHHHHCCCCCCCCEEEE
LTEDPARAEELARRLDEENRARQEIEAAILEEALAQAAALPPEEREYALVLAGEGWHHGV
EECCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCHH
VGICASRVLEVYHRPTILLSIEGDEVRGSARSIPGFHMQRALLQMSELFTRFGGHAAAAG
HHHHHHHHHHHHCCCEEEEEECCCHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHCC
LSLRGRDLVPELRRRMNRLAAEWLRPEDLVPEQRVDAFVALDQIDEGLIRELEALEPFGL
CCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
GNPAPVLATDGLQVVDGRAIGRNGQHLKLFLRPDGDGAAAPVEAVGWNMAVAMPEPGRRI
CCCCCEEEECCEEEECCEEECCCCCEEEEEEEECCCCCCCCHHHCCCCEEEECCCCCCEE
AVAYEPEINTYMGRSRIQLVLKDMKPAAGGEPFRLTDAHCLAWDPLSPSVNGAPAGFPVH
EEEECCCCHHHHCHHHHHHHHHHCCCCCCCCCEEECCCCEEEECCCCCCCCCCCCCCEEE
VVDARGGRLAGLLAAMAGAGPAPGAREVAAEMEDEWGADGEEADPKLLYLAALCRPAEAR
EEECCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCEEEHHHHCCCCCCC
ALVLTASPWAAAALADRLERLGPETRRTVALWLPGEPEPAAGRLVVAAHGQVARGPYSDV
EEEEECCCHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCEEEEEECCCCCCCCCCCE
VLWHPPYAAVGYPAERLHLLWDEQDWALAEECLGWPCPDRDVLVHLYRLLQTGEASPSTL
EEECCCCHHHCCCHHHEEEEECCCCHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCHHHH
ARRLNEVPGPWNRLRYESGLAIFREIGLLDGAGRLCAARGVRFDLEASPRYRRGQEVRAL
HHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCEEECCCCCCCCCHHHHHHH
LAARQTFPGSASA
HHHHHCCCCCCCC
>Mature Secondary Structure 
ARPYRPKRWRPEPADPAGARLLSRQLSISPVTAQVLINRGLTTPEAAQAFLTPGRDRIH
CCCCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHCCCCCHHHHHHHHCCCHHHCC
DPFLLKDMREAVDLIRARLRSGGPIMVYGDYDADGVTATATLLLALRALGAEVAYYIPDR
CCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCEEEECCHH
FREGYGLNAGALRSIRARGYDFIVTVDTGVAAVAEAQVARELGITLVVTDHHEPGPVLPD
HHCCCCCCHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCC
VPALVNPRRPDCTYPFKGLAGVGVAFKLALALGAPNAWDLLDIVTLGTVADMMPLVDENR
CCHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCH
AIVREGLSRLGATHRPGLRALMQVAGVQPPVTAGHVGFALGPRINALGRMSSAEAGVELL
HHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCEECCCCHHHHHCCCCCCCCEEEE
LTEDPARAEELARRLDEENRARQEIEAAILEEALAQAAALPPEEREYALVLAGEGWHHGV
EECCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCHH
VGICASRVLEVYHRPTILLSIEGDEVRGSARSIPGFHMQRALLQMSELFTRFGGHAAAAG
HHHHHHHHHHHHCCCEEEEEECCCHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHCC
LSLRGRDLVPELRRRMNRLAAEWLRPEDLVPEQRVDAFVALDQIDEGLIRELEALEPFGL
CCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
GNPAPVLATDGLQVVDGRAIGRNGQHLKLFLRPDGDGAAAPVEAVGWNMAVAMPEPGRRI
CCCCCEEEECCEEEECCEEECCCCCEEEEEEEECCCCCCCCHHHCCCCEEEECCCCCCEE
AVAYEPEINTYMGRSRIQLVLKDMKPAAGGEPFRLTDAHCLAWDPLSPSVNGAPAGFPVH
EEEECCCCHHHHCHHHHHHHHHHCCCCCCCCCEEECCCCEEEECCCCCCCCCCCCCCEEE
VVDARGGRLAGLLAAMAGAGPAPGAREVAAEMEDEWGADGEEADPKLLYLAALCRPAEAR
EEECCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCEEEHHHHCCCCCCC
ALVLTASPWAAAALADRLERLGPETRRTVALWLPGEPEPAAGRLVVAAHGQVARGPYSDV
EEEEECCCHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCEEEEEECCCCCCCCCCCE
VLWHPPYAAVGYPAERLHLLWDEQDWALAEECLGWPCPDRDVLVHLYRLLQTGEASPSTL
EEECCCCHHHCCCHHHEEEEECCCCHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCHHHH
ARRLNEVPGPWNRLRYESGLAIFREIGLLDGAGRLCAARGVRFDLEASPRYRRGQEVRAL
HHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCEEECCCCCCCCCHHHHHHH
LAARQTFPGSASA
HHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Hydrolase; Acting on ester bonds [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]