| Definition | Symbiobacterium thermophilum IAM 14863 chromosome, complete genome. |
|---|---|
| Accession | NC_006177 |
| Length | 3,566,135 |
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The map label for this gene is 51893553
Identifier: 51893553
GI number: 51893553
Start: 2596844
End: 2598085
Strand: Reverse
Name: 51893553
Synonym: STH2415
Alternate gene names: NA
Gene position: 2598085-2596844 (Counterclockwise)
Preceding gene: 51893554
Following gene: 51893552
Centisome position: 72.85
GC content: 73.91
Gene sequence:
>1242_bases ATGAAATTCGTCATTCTCGCCACAGGCACCCGGGGCGACGTCCAGCCCTTCGTGGCCCTGGCCCAGGGGCTCCGCGCAGC CGGCCACGAGGCGGTGCTGGCGGCGCCCGGCAGCTTCGAATCCTTCGTGCGGAGTCACGGCGTCGGTTTCTTCCCCATGG GCGGCGACTACGCGGCCCTGCTGGAATCGCCGGAGGCGCAGGCGGCCCTCCGGGGAAACCCGGTGAAGATGATGCAGGTG GTCAGGCAGACCGTCTTCCCCATGATGGGCCGTATGCTGGAGGACGCCTGGGCGGCGGCGCAGGGGGCCGACGCGCTCGT CTACCACCCGAAGGCCCTGGCGGGCGCCCACCTGGTGGAGCGGCTGCAGGTGCCCTGCTTCATTGGGGCGCCGGTGCCGG TGGTGGTGCCGACGGCGGCGTTTCCTGCCCCGGCCTTCGTCAGCCGCGACCTGGGCGGCTTCCTCAACCGGCTCACCTAC GCCGCCGTGCGGTCGGGCAGCCGTCCGTTCCGGGGGATGATCAACGAGTGGCGCAGGCAGGTGCTGGGCCTGGGGCCGCG CCGCGAGGGCGAGTACGTGCAGGGCGGCCGGCTGATCCCGGTGCTGCACGCCTTCAGCCCGCACGTGGTGCCCCGCCCCG CCGACTGGCCGCCCGAGGCGATCGTGATGGGCTACTGGTTTCCCAGGCGGGATGAGCCGTGGGAGCCGCCTGCCGCCCTG GCGGCTTTCCTGGAGGAGGGGCCGCCCCCGGTTTACATCGGGTTCGGGTCGGTGTCGGGCATCGACGGGGACGGAAGCAC CCGGATGGCCGCCGAGGCCCTGGCTCGGGCGGGCGTCAGGGGCGTGATCGCGACAGAGACGGGGGATGCGCCCGTGCGCC TCTCCGATACCGTGCTCGCCATCCCCGGCGCCCCGCACGACTGGCTCTTCCCGCGGATGGCGGCGGTCGTCCACCACGGC GGCGCCGGCACGGTGGCGGCCGGGCTGGCGGCAGGCAAGCCGACGCTGGTCTGCCCCGCGACCACGGACCAGCCCTTCTG GGGCCGGGTGGTGCACCGGCTGGGCGTGGGGCCCGCGCCGATTCCCCGCCGGCGGCTGACGGCCGAGCGGCTGGCGGCGG CGATTGGGACGCTCACGACGGATGAAGATATTCAGCGCCGTGCCGCCGCGCTCGGTGAGGCTATCCGGGCGGAGGACGGG GTCGGGCGGGCGGTGGCGGAGATCCTCCGATGCTCGGGGTGA
Upstream 100 bases:
>100_bases GTGGTGCATTATGGTAAGCTATTGTTGTGCGTGATTACGGGGCAATCCTGATCGCGGCACCGGTCTTGCCTGATGCGCAC CAACCGAGGGGGCACGGCTC
Downstream 100 bases:
>100_bases ACCCGGGCAGCACATCAGAGAGGAGCAGGAAGATGGAAGCGAGGCGCAGGGCGGTGGACGCCCGGTTCGTTGAGGGCTGG ATGAGCTACATCGGGGCGGT
Product: UDP-glucose:sterol glucosyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 413; Mature: 413
Protein sequence:
>413_residues MKFVILATGTRGDVQPFVALAQGLRAAGHEAVLAAPGSFESFVRSHGVGFFPMGGDYAALLESPEAQAALRGNPVKMMQV VRQTVFPMMGRMLEDAWAAAQGADALVYHPKALAGAHLVERLQVPCFIGAPVPVVVPTAAFPAPAFVSRDLGGFLNRLTY AAVRSGSRPFRGMINEWRRQVLGLGPRREGEYVQGGRLIPVLHAFSPHVVPRPADWPPEAIVMGYWFPRRDEPWEPPAAL AAFLEEGPPPVYIGFGSVSGIDGDGSTRMAAEALARAGVRGVIATETGDAPVRLSDTVLAIPGAPHDWLFPRMAAVVHHG GAGTVAAGLAAGKPTLVCPATTDQPFWGRVVHRLGVGPAPIPRRRLTAERLAAAIGTLTTDEDIQRRAAALGEAIRAEDG VGRAVAEILRCSG
Sequences:
>Translated_413_residues MKFVILATGTRGDVQPFVALAQGLRAAGHEAVLAAPGSFESFVRSHGVGFFPMGGDYAALLESPEAQAALRGNPVKMMQV VRQTVFPMMGRMLEDAWAAAQGADALVYHPKALAGAHLVERLQVPCFIGAPVPVVVPTAAFPAPAFVSRDLGGFLNRLTY AAVRSGSRPFRGMINEWRRQVLGLGPRREGEYVQGGRLIPVLHAFSPHVVPRPADWPPEAIVMGYWFPRRDEPWEPPAAL AAFLEEGPPPVYIGFGSVSGIDGDGSTRMAAEALARAGVRGVIATETGDAPVRLSDTVLAIPGAPHDWLFPRMAAVVHHG GAGTVAAGLAAGKPTLVCPATTDQPFWGRVVHRLGVGPAPIPRRRLTAERLAAAIGTLTTDEDIQRRAAALGEAIRAEDG VGRAVAEILRCSG >Mature_413_residues MKFVILATGTRGDVQPFVALAQGLRAAGHEAVLAAPGSFESFVRSHGVGFFPMGGDYAALLESPEAQAALRGNPVKMMQV VRQTVFPMMGRMLEDAWAAAQGADALVYHPKALAGAHLVERLQVPCFIGAPVPVVVPTAAFPAPAFVSRDLGGFLNRLTY AAVRSGSRPFRGMINEWRRQVLGLGPRREGEYVQGGRLIPVLHAFSPHVVPRPADWPPEAIVMGYWFPRRDEPWEPPAAL AAFLEEGPPPVYIGFGSVSGIDGDGSTRMAAEALARAGVRGVIATETGDAPVRLSDTVLAIPGAPHDWLFPRMAAVVHHG GAGTVAAGLAAGKPTLVCPATTDQPFWGRVVHRLGVGPAPIPRRRLTAERLAAAIGTLTTDEDIQRRAAALGEAIRAEDG VGRAVAEILRCSG
Specific function: Unknown
COG id: COG1819
COG function: function code GC; Glycosyl transferases, related to UDP-glucuronosyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To M.leprae L518_C2_147 and M.tuberculosis Rv1524 [H]
Homologues:
Organism=Saccharomyces cerevisiae, GI6323218, Length=424, Percent_Identity=33.2547169811321, Blast_Score=223, Evalue=5e-59,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004276 [H]
Pfam domain/function: PF03033 Glyco_transf_28 [H]
EC number: NA
Molecular weight: Translated: 43641; Mature: 43641
Theoretical pI: Translated: 8.84; Mature: 8.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKFVILATGTRGDVQPFVALAQGLRAAGHEAVLAAPGSFESFVRSHGVGFFPMGGDYAAL CEEEEEECCCCCCHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHCCCEEEECCCCHHHH LESPEAQAALRGNPVKMMQVVRQTVFPMMGRMLEDAWAAAQGADALVYHPKALAGAHLVE HCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHH RLQVPCFIGAPVPVVVPTAAFPAPAFVSRDLGGFLNRLTYAAVRSGSRPFRGMINEWRRQ HHCCCEEECCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH VLGLGPRREGEYVQGGRLIPVLHAFSPHVVPRPADWPPEAIVMGYWFPRRDEPWEPPAAL HHCCCCCCCCCCCCCCEEEEEHHCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCHHHH AAFLEEGPPPVYIGFGSVSGIDGDGSTRMAAEALARAGVRGVIATETGDAPVRLSDTVLA HHHHHCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCEEECCEEEE IPGAPHDWLFPRMAAVVHHGGAGTVAAGLAAGKPTLVCPATTDQPFWGRVVHRLGVGPAP CCCCCCHHHHHHHHHHHHCCCCCHHHHHHCCCCCCEEECCCCCCCHHHHHHHHHCCCCCC IPRRRLTAERLAAAIGTLTTDEDIQRRAAALGEAIRAEDGVGRAVAEILRCSG CCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCC >Mature Secondary Structure MKFVILATGTRGDVQPFVALAQGLRAAGHEAVLAAPGSFESFVRSHGVGFFPMGGDYAAL CEEEEEECCCCCCHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHCCCEEEECCCCHHHH LESPEAQAALRGNPVKMMQVVRQTVFPMMGRMLEDAWAAAQGADALVYHPKALAGAHLVE HCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHH RLQVPCFIGAPVPVVVPTAAFPAPAFVSRDLGGFLNRLTYAAVRSGSRPFRGMINEWRRQ HHCCCEEECCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH VLGLGPRREGEYVQGGRLIPVLHAFSPHVVPRPADWPPEAIVMGYWFPRRDEPWEPPAAL HHCCCCCCCCCCCCCCEEEEEHHCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCHHHH AAFLEEGPPPVYIGFGSVSGIDGDGSTRMAAEALARAGVRGVIATETGDAPVRLSDTVLA HHHHHCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCEEECCEEEE IPGAPHDWLFPRMAAVVHHGGAGTVAAGLAAGKPTLVCPATTDQPFWGRVVHRLGVGPAP CCCCCCHHHHHHHHHHHHCCCCCHHHHHHCCCCCCEEECCCCCCCHHHHHHHHHCCCCCC IPRRRLTAERLAAAIGTLTTDEDIQRRAAALGEAIRAEDGVGRAVAEILRCSG CCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]