Definition Symbiobacterium thermophilum IAM 14863 chromosome, complete genome.
Accession NC_006177
Length 3,566,135

Click here to switch to the map view.

The map label for this gene is katG

Identifier: 51893554

GI number: 51893554

Start: 2598330

End: 2600507

Strand: Reverse

Name: katG

Synonym: STH2416

Alternate gene names: 51893554

Gene position: 2600507-2598330 (Counterclockwise)

Preceding gene: 51893555

Following gene: 51893553

Centisome position: 72.92

GC content: 67.77

Gene sequence:

>2178_bases
GTGAGGGAAGAGGACATCCGCTCCACGGCCGGGCACGGCACGTCCAACAAGGACTGGTGGCCCAATCAGCTCAACCTGCG
CATCCTGCACCAGCACTCCGAGAAGGCCAACCCGATGGGCCCGGACTTCAACTACCGGGAGGAGTTCAAGAAGCTGGACT
ACTGGGCCCTGAAGGAGGACCTGCGCAAGCTGATGACCGAGTCGCAGGACTGGTGGCCCGCCGACTTCGGCCACTACGGG
CCGCTCATCATCCGGATGGCCTGGCACAGCGCCGGCACCTACCGCATCCAGGACGGGCGCGGCGGTGCTGAGTCGGGCGC
TCAGCGGTTCGCCCCGCTCAACAGCTGGCCCGACAACATCAACCTGGACAAGGCCCGCCGGCTGCTCTGGCCCATCAAGC
AGAAGTACGGCAGGCGCATCTCCTGGGCGGACCTGATGATCCTCGCCGGCAACGTCGCCCTCGAGTCCATGGGGCTGAAG
ACCATCGGTTTCGCCGGCGGGAGGGCTGACGTATGGGAGCCGGAGGAGGACATCTACTGGGGCAGTGAGCAGCAGTGGCT
GGGCCGCGACCGCTTCGGCGAGGAGGGCAAGCTCGAGGATCCTCTGGCGGCGTCCGAGATGGGGCTGATCTACGTCAACC
CCGAGGGGCCCGGTCGCGAGCCGGATCCCCTGAAGGCGGCCCAACAGATCCGTGAGACCTTCAAGCGCATGGGCATGAAC
GACGAGGAGACCGTCGCCCTCATCGCCGGCGGCCATACCTTCGGCAAGACCCACGGAGCGGCGTCGCCGTCGCACCTGGG
CCCCGAGCCGGAGGCGGCCCCGATCGAGGAGATGGGGCTGGGATGGAAGAACAGCTACGGCACCGGCAAGGGCGGCGACA
CCATCACCAGCGGCCTGGAGGTCACCTGGACGTCCTCCCCGACCAAGTGGACCAGCAACTTCCTCTGGAACCTCTTCGGC
TACGAGTGGGAGCTGACCAAGAGCCCTGCCGGGGCCTGGCAGTGGCGGCCCAAGAACGGCGCCGGGGAGGGCACGGTCCC
CGACGCGCACGACCCCAACAAGCGGCACGCGCCCGGCATGCTGACCACCGACATCGCCCTGCGGGTGGACCCGGTCTACG
AGAAGATCGCCCGGCGCTTCCTGGAGAACCCGGACGAGTTCGCCAAGGCCTTCGCCCGCGCCTGGTTCAAGCTGACCCAC
CGCGACCTGGGGCCGCGCTCCCGCTACCTGGGTCCTGAGGTGCCGGAGGAGGAGTTCATCTGGCAGGATCCGCTGCCGAA
GCGGGACTACGACCTGATCGACGAGGGCGACATCGCCGAGCTGAAGAAGCGGATCCAGGCCTCCGGGATGTCCATCCGGG
AGATGGTGATGACCGCCTGGGCCTCGGCTTCCACCTTCCGTGGGTCCGACAAGCGGGGCGGCGCCAATGGCGCCCGCATC
CGGCTGGCGCCCCAGATCGGCTGGGAGGTGAACGAGCCCGAGCAGCTGCGGCCCGTGCTGGAGACCCTGGAGGGCATCCA
GCAGGAATTCAACCGGTCGCAGACGGGCCGGAAGCGCGTCTCCCTGGCCGACCTGATCGTGCTCGCCGGCTGCGTCGGCA
TCGAGCAGGCGGCCCGGAACGCCGGGTTCGAGATCACGGTGCCGTTCACGCCGGGCCGGGTCGACGCGACCCAGGAGCAG
ACCGACGTCGAGTCCTTCTCCTACCTGGAGCCGGTGCACGACGGCTTCCGCAACTACCTGAAGCGGAAGTTCTCGGTTCC
CGCGGAGCACCTGCTCATCGACCGGGCCAATCTGCTCACGCTCACCGCGCCCGAGATGACGGTGCTCATCGGCGGCCTGC
GGGTGCTCGACTGCAACTGGGGCCGCACGAAGCACGGCGTGCTCACCGACCGGCCCGGTGCGCTCACCAACGACTTCTTC
GTCAACCTGCTCGACATGCGGTGGAAGTGGAACGCCACCGATGACGAGAACGTGTTCGAGGGCCGCGACCGCGCCACCGG
CGAGCTGAAGTGGACCGCCACCCGGGTCGACCTGATCTTCGGCTCCAACGCGCAGCTGCGGGCCATCGCGGAGGTCTACG
CCTCCAACGACGGCCAGGAGAAGTTCGTCCAGGACTTCGTCAAGGCCTGGACCAAGGTGATGAACCTCGACCGCTTCGAT
CTGCTGGTGAAGAAATAG

Upstream 100 bases:

>100_bases
AATGAGAATAAATCTCAGCAGGATTCGCTGCGGACACGCAGAATTACATTTACATCGCAGAAGTTACAAAAAGTGAGTCG
CCTAAGAGGAGGAGACGACT

Downstream 100 bases:

>100_bases
CAAGGGCTGCTGACGCCGGCCGCCCGAGCGCCCGGAAGGCTCGGGCGGCCGCTTGGCGCCTGGGCCCGCGTCTCTTACCG
GCCGGGAGACCCATAGCAAA

Product: catalase/peroxidase

Products: NA

Alternate protein names: CP; Peroxidase/catalase

Number of amino acids: Translated: 725; Mature: 725

Protein sequence:

>725_residues
MREEDIRSTAGHGTSNKDWWPNQLNLRILHQHSEKANPMGPDFNYREEFKKLDYWALKEDLRKLMTESQDWWPADFGHYG
PLIIRMAWHSAGTYRIQDGRGGAESGAQRFAPLNSWPDNINLDKARRLLWPIKQKYGRRISWADLMILAGNVALESMGLK
TIGFAGGRADVWEPEEDIYWGSEQQWLGRDRFGEEGKLEDPLAASEMGLIYVNPEGPGREPDPLKAAQQIRETFKRMGMN
DEETVALIAGGHTFGKTHGAASPSHLGPEPEAAPIEEMGLGWKNSYGTGKGGDTITSGLEVTWTSSPTKWTSNFLWNLFG
YEWELTKSPAGAWQWRPKNGAGEGTVPDAHDPNKRHAPGMLTTDIALRVDPVYEKIARRFLENPDEFAKAFARAWFKLTH
RDLGPRSRYLGPEVPEEEFIWQDPLPKRDYDLIDEGDIAELKKRIQASGMSIREMVMTAWASASTFRGSDKRGGANGARI
RLAPQIGWEVNEPEQLRPVLETLEGIQQEFNRSQTGRKRVSLADLIVLAGCVGIEQAARNAGFEITVPFTPGRVDATQEQ
TDVESFSYLEPVHDGFRNYLKRKFSVPAEHLLIDRANLLTLTAPEMTVLIGGLRVLDCNWGRTKHGVLTDRPGALTNDFF
VNLLDMRWKWNATDDENVFEGRDRATGELKWTATRVDLIFGSNAQLRAIAEVYASNDGQEKFVQDFVKAWTKVMNLDRFD
LLVKK

Sequences:

>Translated_725_residues
MREEDIRSTAGHGTSNKDWWPNQLNLRILHQHSEKANPMGPDFNYREEFKKLDYWALKEDLRKLMTESQDWWPADFGHYG
PLIIRMAWHSAGTYRIQDGRGGAESGAQRFAPLNSWPDNINLDKARRLLWPIKQKYGRRISWADLMILAGNVALESMGLK
TIGFAGGRADVWEPEEDIYWGSEQQWLGRDRFGEEGKLEDPLAASEMGLIYVNPEGPGREPDPLKAAQQIRETFKRMGMN
DEETVALIAGGHTFGKTHGAASPSHLGPEPEAAPIEEMGLGWKNSYGTGKGGDTITSGLEVTWTSSPTKWTSNFLWNLFG
YEWELTKSPAGAWQWRPKNGAGEGTVPDAHDPNKRHAPGMLTTDIALRVDPVYEKIARRFLENPDEFAKAFARAWFKLTH
RDLGPRSRYLGPEVPEEEFIWQDPLPKRDYDLIDEGDIAELKKRIQASGMSIREMVMTAWASASTFRGSDKRGGANGARI
RLAPQIGWEVNEPEQLRPVLETLEGIQQEFNRSQTGRKRVSLADLIVLAGCVGIEQAARNAGFEITVPFTPGRVDATQEQ
TDVESFSYLEPVHDGFRNYLKRKFSVPAEHLLIDRANLLTLTAPEMTVLIGGLRVLDCNWGRTKHGVLTDRPGALTNDFF
VNLLDMRWKWNATDDENVFEGRDRATGELKWTATRVDLIFGSNAQLRAIAEVYASNDGQEKFVQDFVKAWTKVMNLDRFD
LLVKK
>Mature_725_residues
MREEDIRSTAGHGTSNKDWWPNQLNLRILHQHSEKANPMGPDFNYREEFKKLDYWALKEDLRKLMTESQDWWPADFGHYG
PLIIRMAWHSAGTYRIQDGRGGAESGAQRFAPLNSWPDNINLDKARRLLWPIKQKYGRRISWADLMILAGNVALESMGLK
TIGFAGGRADVWEPEEDIYWGSEQQWLGRDRFGEEGKLEDPLAASEMGLIYVNPEGPGREPDPLKAAQQIRETFKRMGMN
DEETVALIAGGHTFGKTHGAASPSHLGPEPEAAPIEEMGLGWKNSYGTGKGGDTITSGLEVTWTSSPTKWTSNFLWNLFG
YEWELTKSPAGAWQWRPKNGAGEGTVPDAHDPNKRHAPGMLTTDIALRVDPVYEKIARRFLENPDEFAKAFARAWFKLTH
RDLGPRSRYLGPEVPEEEFIWQDPLPKRDYDLIDEGDIAELKKRIQASGMSIREMVMTAWASASTFRGSDKRGGANGARI
RLAPQIGWEVNEPEQLRPVLETLEGIQQEFNRSQTGRKRVSLADLIVLAGCVGIEQAARNAGFEITVPFTPGRVDATQEQ
TDVESFSYLEPVHDGFRNYLKRKFSVPAEHLLIDRANLLTLTAPEMTVLIGGLRVLDCNWGRTKHGVLTDRPGALTNDFF
VNLLDMRWKWNATDDENVFEGRDRATGELKWTATRVDLIFGSNAQLRAIAEVYASNDGQEKFVQDFVKAWTKVMNLDRFD
LLVKK

Specific function: Bifunctional enzyme with both catalase and broad- spectrum peroxidase activity

COG id: COG0376

COG function: function code P; Catalase (peroxidase I)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peroxidase family. Peroxidase/catalase subfamily

Homologues:

Organism=Escherichia coli, GI1790378, Length=715, Percent_Identity=63.0769230769231, Blast_Score=892, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): KATG_SYMTH (Q67LP5)

Other databases:

- EMBL:   AP006840
- RefSeq:   YP_076245.1
- HSSP:   O59651
- ProteinModelPortal:   Q67LP5
- SMR:   Q67LP5
- PeroxiBase:   2350
- GeneID:   2980843
- GenomeReviews:   AP006840_GR
- KEGG:   sth:STH2416
- NMPDR:   fig|292459.1.peg.2313
- HOGENOM:   HBG285610
- OMA:   FEWELTK
- ProtClustDB:   PRK15061
- BioCyc:   STHE292459:STH2416-MONOMER
- HAMAP:   MF_01961
- InterPro:   IPR000763
- InterPro:   IPR010255
- InterPro:   IPR002016
- InterPro:   IPR019794
- InterPro:   IPR019793
- PRINTS:   PR00460
- PRINTS:   PR00458
- TIGRFAMs:   TIGR00198

Pfam domain/function: PF00141 peroxidase; SSF48113 Peroxidase_super

EC number: =1.11.1.6; =1.11.1.7

Molecular weight: Translated: 81958; Mature: 81958

Theoretical pI: Translated: 5.73; Mature: 5.73

Prosite motif: PS00435 PEROXIDASE_1; PS00436 PEROXIDASE_2; PS50873 PEROXIDASE_4

Important sites: ACT_SITE 89-89

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MREEDIRSTAGHGTSNKDWWPNQLNLRILHQHSEKANPMGPDFNYREEFKKLDYWALKED
CCCHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
LRKLMTESQDWWPADFGHYGPLIIRMAWHSAGTYRIQDGRGGAESGAQRFAPLNSWPDNI
HHHHHHCCCCCCCCCCCCCCCEEEEEEECCCCEEEEECCCCCHHHHHHHCCCCCCCCCCC
NLDKARRLLWPIKQKYGRRISWADLMILAGNVALESMGLKTIGFAGGRADVWEPEEDIYW
CHHHHHHHHHHHHHHHCCCCCHHHEEEEECCHHHHHCCCCEEECCCCCCCCCCCCCCCEE
GSEQQWLGRDRFGEEGKLEDPLAASEMGLIYVNPEGPGREPDPLKAAQQIRETFKRMGMN
CCCHHHCCCCCCCCCCCCCCCCCHHHCCEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCC
DEETVALIAGGHTFGKTHGAASPSHLGPEPEAAPIEEMGLGWKNSYGTGKGGDTITSGLE
CCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCHHHCCEE
VTWTSSPTKWTSNFLWNLFGYEWELTKSPAGAWQWRPKNGAGEGTVPDAHDPNKRHAPGM
EEECCCCCHHHHHHHHHHHCCEEEEECCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCE
LTTDIALRVDPVYEKIARRFLENPDEFAKAFARAWFKLTHRDLGPRSRYLGPEVPEEEFI
EEEEEEEEECHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCHHCC
WQDPLPKRDYDLIDEGDIAELKKRIQASGMSIREMVMTAWASASTFRGSDKRGGANGARI
CCCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHCCHHCCCCCCCCCCCCCEE
RLAPQIGWEVNEPEQLRPVLETLEGIQQEFNRSQTGRKRVSLADLIVLAGCVGIEQAARN
EECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
AGFEITVPFTPGRVDATQEQTDVESFSYLEPVHDGFRNYLKRKFSVPAEHLLIDRANLLT
CCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHEEECCCEEE
LTAPEMTVLIGGLRVLDCNWGRTKHGVLTDRPGALTNDFFVNLLDMRWKWNATDDENVFE
EECCCCEEEECCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHEEEECCCCCCCHHC
GRDRATGELKWTATRVDLIFGSNAQLRAIAEVYASNDGQEKFVQDFVKAWTKVMNLDRFD
CCCCCCCEEEEEEEEEEEEECCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHH
LLVKK
HEECC
>Mature Secondary Structure
MREEDIRSTAGHGTSNKDWWPNQLNLRILHQHSEKANPMGPDFNYREEFKKLDYWALKED
CCCHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
LRKLMTESQDWWPADFGHYGPLIIRMAWHSAGTYRIQDGRGGAESGAQRFAPLNSWPDNI
HHHHHHCCCCCCCCCCCCCCCEEEEEEECCCCEEEEECCCCCHHHHHHHCCCCCCCCCCC
NLDKARRLLWPIKQKYGRRISWADLMILAGNVALESMGLKTIGFAGGRADVWEPEEDIYW
CHHHHHHHHHHHHHHHCCCCCHHHEEEEECCHHHHHCCCCEEECCCCCCCCCCCCCCCEE
GSEQQWLGRDRFGEEGKLEDPLAASEMGLIYVNPEGPGREPDPLKAAQQIRETFKRMGMN
CCCHHHCCCCCCCCCCCCCCCCCHHHCCEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCC
DEETVALIAGGHTFGKTHGAASPSHLGPEPEAAPIEEMGLGWKNSYGTGKGGDTITSGLE
CCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCHHHCCEE
VTWTSSPTKWTSNFLWNLFGYEWELTKSPAGAWQWRPKNGAGEGTVPDAHDPNKRHAPGM
EEECCCCCHHHHHHHHHHHCCEEEEECCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCE
LTTDIALRVDPVYEKIARRFLENPDEFAKAFARAWFKLTHRDLGPRSRYLGPEVPEEEFI
EEEEEEEEECHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCHHCC
WQDPLPKRDYDLIDEGDIAELKKRIQASGMSIREMVMTAWASASTFRGSDKRGGANGARI
CCCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHCCHHCCCCCCCCCCCCCEE
RLAPQIGWEVNEPEQLRPVLETLEGIQQEFNRSQTGRKRVSLADLIVLAGCVGIEQAARN
EECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
AGFEITVPFTPGRVDATQEQTDVESFSYLEPVHDGFRNYLKRKFSVPAEHLLIDRANLLT
CCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHEEECCCEEE
LTAPEMTVLIGGLRVLDCNWGRTKHGVLTDRPGALTNDFFVNLLDMRWKWNATDDENVFE
EECCCCEEEECCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHEEEECCCCCCCHHC
GRDRATGELKWTATRVDLIFGSNAQLRAIAEVYASNDGQEKFVQDFVKAWTKVMNLDRFD
CCCCCCCEEEEEEEEEEEEECCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHH
LLVKK
HEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA