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The map label for this gene is rpiB [H]

Identifier: 51893475

GI number: 51893475

Start: 2525048

End: 2525512

Strand: Reverse

Name: rpiB [H]

Synonym: STH2337

Alternate gene names: 51893475

Gene position: 2525512-2525048 (Counterclockwise)

Preceding gene: 51893476

Following gene: 51893474

Centisome position: 70.82

GC content: 66.67

Gene sequence:

>465_bases
ATGAGGATTGCCATCGGCAATGATCACGTGGGTACGGAGATGAAGCGGGCCATCGCGGCCCACCTGGAAAGCCTGGGCCA
CGAGGTGGTCAACTTCGGCACGGACAGCACCGAACGGACGGACTATCCGATCTACGGGGAAAGGGTGGCCCGCGCGGTGG
CCGCAGGGGAGGTCGACTGCGGGATTCTCATCTGCGGCACCGGGGTGGGCATCTCGCTGGCTGCGAATAAGGTCAGGGGC
ATCCGGGCCGTGGTGTGCAGCGAGCCGTACACGGCCCGCCTGTCGAAGCAGCACAACAACACCAACATCCTGGCCTTCGG
CGCCCGGGTGGTGGGCGTGGACCTGGCCAAGATGATTGTCGACGAGTGGCTGAACGCCTCGTTCGAAGGGGGCCGCCACC
AGCGCCGGGTCGACATGATCGCCGACATCGAGCGCCGGGAGGAGTGCGGGCCGGAGGGGTGCTGA

Upstream 100 bases:

>100_bases
GGGGCAAGCCCTACGGCGAGGTGATCGCGGAACTGCGCAGCCGGAGCGGCGACTGCCGGCGTTGACGCTGGACGAGCCAA
GACGGAGGAGCGGGAAGCGG

Downstream 100 bases:

>100_bases
ACGCCGCACCCCCGGCACGGAAACGCAGCAAGACCCAGCCTGTTCGTGACCGAACGGGCTGGGTCTTGCGCTTTCGGCGT
ACCCCGAAAGTGCAGCGGGG

Product: ribose-5-phosphate isomerase B

Products: NA

Alternate protein names: Phosphoriboisomerase B [H]

Number of amino acids: Translated: 154; Mature: 154

Protein sequence:

>154_residues
MRIAIGNDHVGTEMKRAIAAHLESLGHEVVNFGTDSTERTDYPIYGERVARAVAAGEVDCGILICGTGVGISLAANKVRG
IRAVVCSEPYTARLSKQHNNTNILAFGARVVGVDLAKMIVDEWLNASFEGGRHQRRVDMIADIERREECGPEGC

Sequences:

>Translated_154_residues
MRIAIGNDHVGTEMKRAIAAHLESLGHEVVNFGTDSTERTDYPIYGERVARAVAAGEVDCGILICGTGVGISLAANKVRG
IRAVVCSEPYTARLSKQHNNTNILAFGARVVGVDLAKMIVDEWLNASFEGGRHQRRVDMIADIERREECGPEGC
>Mature_154_residues
MRIAIGNDHVGTEMKRAIAAHLESLGHEVVNFGTDSTERTDYPIYGERVARAVAAGEVDCGILICGTGVGISLAANKVRG
IRAVVCSEPYTARLSKQHNNTNILAFGARVVGVDLAKMIVDEWLNASFEGGRHQRRVDMIADIERREECGPEGC

Specific function: In addition to its activity on D-ribose 5-phosphate it probably also has activity on D-allose 6-phosphate [H]

COG id: COG0698

COG function: function code G; Ribose 5-phosphate isomerase RpiB

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the lacAB/rpiB family [H]

Homologues:

Organism=Escherichia coli, GI1790528, Length=145, Percent_Identity=68.2758620689655, Blast_Score=200, Evalue=3e-53,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003500
- InterPro:   IPR004785 [H]

Pfam domain/function: PF02502 LacAB_rpiB [H]

EC number: =5.3.1.6 [H]

Molecular weight: Translated: 16665; Mature: 16665

Theoretical pI: Translated: 6.35; Mature: 6.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.2 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
3.2 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRIAIGNDHVGTEMKRAIAAHLESLGHEVVNFGTDSTERTDYPIYGERVARAVAAGEVDC
CEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCC
GILICGTGVGISLAANKVRGIRAVVCSEPYTARLSKQHNNTNILAFGARVVGVDLAKMIV
CEEEECCCCCEEHHHHHHCCEEEEEECCCHHHHHHHCCCCCEEEEECCCHHHHHHHHHHH
DEWLNASFEGGRHQRRVDMIADIERREECGPEGC
HHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MRIAIGNDHVGTEMKRAIAAHLESLGHEVVNFGTDSTERTDYPIYGERVARAVAAGEVDC
CEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCC
GILICGTGVGISLAANKVRGIRAVVCSEPYTARLSKQHNNTNILAFGARVVGVDLAKMIV
CEEEECCCCCEEHHHHHHCCEEEEEECCCHHHHHHHCCCCCEEEEECCCHHHHHHHHHHH
DEWLNASFEGGRHQRRVDMIADIERREECGPEGC
HHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8576032; 7610040; 9278503; 1840580; 7984428; 9401019 [H]