Click here to switch to the map view.

The map label for this gene is 51893474

Identifier: 51893474

GI number: 51893474

Start: 2524008

End: 2524742

Strand: Reverse

Name: 51893474

Synonym: STH2336

Alternate gene names: NA

Gene position: 2524742-2524008 (Counterclockwise)

Preceding gene: 51893475

Following gene: 51893473

Centisome position: 70.8

GC content: 70.48

Gene sequence:

>735_bases
GTGGCAGGCGGAGGAGCTGCCGGCCGGATCGAAAGACGGGGCCGGCAGTCCCGGCGGACGGAGCGGGCCCTGCGCATCCT
CGACGCGGCCGCGTCGCTGGTGGAGCGGTACGGTTACAGCAAGACCACCATGGACGATGTGGCGCGGGAGGCCGGGGTGG
CCAAGGGGACGCTCTACCTGCACTGGAACACGCGCGAGGAGCTGTTCGGCGCGGTTCTGCGCCGGGAGCAGATCCTGCTC
ACGCGCAGCTTCCTCGACCGCATGCGGGCCCAGAAGCAGCCGCTCACGGTGCACGCCCTCTTCAAGCAGGCGGCGCTGGG
GCTGCTCGAGCGCCCGCTGGTGCGGGCGGTCTTCACCCGCGACGTGGAGGTGGTCGGCAACCTGCTCCGGCGCGAGCAGC
GCGATCACCCCGAGCAGAAGGAGCTGTTCCACCTGCTGTTGGACTTCCTCGGCCGGTCCAACCTGATGCGGCGCGACCTC
ACACCCCAGGCCCAGGCGTTCCTGGTGAGCGCGATCTTTCTCGGGTTCTTCCTCATGGTCTCCTGGGTACCCGACCAGGC
GGAGATGAGCGACGAGCAGGTCGCCGGCCTCATGGCGGACACCGTGGTGGCGGCGCTGCACCTGGACGGACAGGCGACGC
CCCGGGAGGAGGCGGAAGCGGCGGAGGACGTGCTGAGGCACCTGGAGGAGCTGGTTGCCCGGGAGGAGGCTGCGTTCCAG
GCGGAGTTGGCGTGA

Upstream 100 bases:

>100_bases
CGGGGGTCGGCAGGGGATGGTGCTCAGGGGGAGAGGCGAGCGCAACGAAGGCCGGGTGGGGAGTGCGGGAAGGGCAGGTG
ATGCGCGCACCGCAGGCGAC

Downstream 100 bases:

>100_bases
TCGGCCCCGCAGGGGGCAGTTGGCGCACCGCAGCATCCGAAGGAGGGAAGGTTGATGAATCTCGCTGAGACCTATCTGGG
CCGCCAGGTGTTGGAATACC

Product: putative transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator; Transcriptional Regulator TetR Family; HTH-Type Transcriptional Regulator

Number of amino acids: Translated: 244; Mature: 243

Protein sequence:

>244_residues
MAGGGAAGRIERRGRQSRRTERALRILDAAASLVERYGYSKTTMDDVAREAGVAKGTLYLHWNTREELFGAVLRREQILL
TRSFLDRMRAQKQPLTVHALFKQAALGLLERPLVRAVFTRDVEVVGNLLRREQRDHPEQKELFHLLLDFLGRSNLMRRDL
TPQAQAFLVSAIFLGFFLMVSWVPDQAEMSDEQVAGLMADTVVAALHLDGQATPREEAEAAEDVLRHLEELVAREEAAFQ
AELA

Sequences:

>Translated_244_residues
MAGGGAAGRIERRGRQSRRTERALRILDAAASLVERYGYSKTTMDDVAREAGVAKGTLYLHWNTREELFGAVLRREQILL
TRSFLDRMRAQKQPLTVHALFKQAALGLLERPLVRAVFTRDVEVVGNLLRREQRDHPEQKELFHLLLDFLGRSNLMRRDL
TPQAQAFLVSAIFLGFFLMVSWVPDQAEMSDEQVAGLMADTVVAALHLDGQATPREEAEAAEDVLRHLEELVAREEAAFQ
AELA
>Mature_243_residues
AGGGAAGRIERRGRQSRRTERALRILDAAASLVERYGYSKTTMDDVAREAGVAKGTLYLHWNTREELFGAVLRREQILLT
RSFLDRMRAQKQPLTVHALFKQAALGLLERPLVRAVFTRDVEVVGNLLRREQRDHPEQKELFHLLLDFLGRSNLMRRDLT
PQAQAFLVSAIFLGFFLMVSWVPDQAEMSDEQVAGLMADTVVAALHLDGQATPREEAEAAEDVLRHLEELVAREEAAFQA
ELA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27519; Mature: 27388

Theoretical pI: Translated: 6.53; Mature: 6.53

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGGGAAGRIERRGRQSRRTERALRILDAAASLVERYGYSKTTMDDVAREAGVAKGTLYL
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCEEEE
HWNTREELFGAVLRREQILLTRSFLDRMRAQKQPLTVHALFKQAALGLLERPLVRAVFTR
EECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
DVEVVGNLLRREQRDHPEQKELFHLLLDFLGRSNLMRRDLTPQAQAFLVSAIFLGFFLMV
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHCCCHHHHHHHHHHHHHHHHHHH
SWVPDQAEMSDEQVAGLMADTVVAALHLDGQATPREEAEAAEDVLRHLEELVAREEAAFQ
HCCCCHHHCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
AELA
HCCC
>Mature Secondary Structure 
AGGGAAGRIERRGRQSRRTERALRILDAAASLVERYGYSKTTMDDVAREAGVAKGTLYL
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCEEEE
HWNTREELFGAVLRREQILLTRSFLDRMRAQKQPLTVHALFKQAALGLLERPLVRAVFTR
EECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
DVEVVGNLLRREQRDHPEQKELFHLLLDFLGRSNLMRRDLTPQAQAFLVSAIFLGFFLMV
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHCCCHHHHHHHHHHHHHHHHHHH
SWVPDQAEMSDEQVAGLMADTVVAALHLDGQATPREEAEAAEDVLRHLEELVAREEAAFQ
HCCCCHHHCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
AELA
HCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA