Click here to switch to the map view.

The map label for this gene is pqqE [H]

Identifier: 51893473

GI number: 51893473

Start: 2522577

End: 2523851

Strand: Reverse

Name: pqqE [H]

Synonym: STH2335

Alternate gene names: 51893473

Gene position: 2523851-2522577 (Counterclockwise)

Preceding gene: 51893474

Following gene: 51893472

Centisome position: 70.77

GC content: 66.59

Gene sequence:

>1275_bases
GTGGTCCACAACGCTCCCCTGGAGAGCCATCGCGAGATCGCCGCCAAGGTGAAGACCTACCTCGACGACGAGAGCAGCAA
CTGGCACCAGCTGGGCATGCGGATGCTCACCGAGACGCACCCCAACGTGCGCAAGCGCACGGCGGTCAACTTCTTCATCA
ACGCCAGCCTGGTCGGCATCCCCAAGCAGCGGGAGGCGGAGAAGCGGCTGGGCGTCAAGGTGCCGTGGGCCGTCCTGATG
GATCCCACCGCCAAGTGCAACCTGCGCTGCATCGGCTGCTGGGCGGGCGACTACGAGCTGCGGCCCGAGCTCAGCCTCGA
GACCATGGACCGCATCTGCCGGGAGGGCGGAGAGCTGGGCATTCATTTCTACGTCATCTCGGGCGGCGAGCCCATGGTCC
GCCAGAATGACCTGCTGGAGCTGGCCAGGCGCCATCCGGACAAGATGTTCCACATCTACTCCAACGGCACGCTGATCACC
CGGGAGTTCGCCCGGGAGGCGGCGGAGCGGGGCAACATGGTTTTCGCCCTCAGCCTGGAGGGGCTGGAGGCGTCCACCGA
TGCCCGGCGGGGCAAGGGCGTCTTCCAGAAGGTGATGGACGCCATGGACATCCTGCGGGAGGCGGGGGTCATCTACGGCT
TCTCGGCCACCTACACCCGCAAGAACACCGAGGAGCTGGGCAGCGAGGCGTTCATCGACAGGATGGTGGAGAAGGGGGCC
GCCTTCGGCTGGTTCTTCACCTACATCCCCATCGGTCGGGACGTGGACCTGGAGCTCATGGCGACCCCGGAGCAGCGGGC
GTACATGTTCGACCGCATCACCGCGTTCCGCCGCACCAAGCCGATCTTCCTGGTGGACTTCTGGAACGACGGCGAGGCGG
CCGTCGGCTGCATCGCCGGCGGGCGCAAGTACTTCCACATCAACTCCGCCGGCGACGTGGAGCCGTGCGCCTTCGCCCAC
TACGCCACCTGCAACATCCACGAGGTCTCGGTCGCGGAGGCCCTGCAGAACCCGCTGTTCAAGGCCTACCAGAAGCGGCA
GCCCTTCTCCGGGAACCTGCGCCGACCGTGCCCGATCATCGACCATCCGTATGTGCTCCGCGACATGGTCAAGGAGTCGG
GGGCGTACTACACGCAGAAGAGCGACAACGAGACGGTGGACGAGTTCGCCGAGAAGCTGGCGGGCTACGCGGCGGCCTGG
GGCGAACTGGCCGACGAGATCTGGGAGAAGAGGCTGGCCGGCGCTCCCGCAGGCATGGACGGGGGCAACGACTGA

Upstream 100 bases:

>100_bases
GAATCTCGCTGAGACCTATCTGGGCCGCCAGGTGTTGGAATACCTGATCGGGATGGTCATGCGCAACCCGGAGGAGAACC
TTCCGCGTCTGGTCGACTGG

Downstream 100 bases:

>100_bases
GCCGGGAAGGTCAACCTGACGGGCGAGTGTGGGGCGCTGCACCTCTGATGCGGCGCCCCGCTGCGCGCCGCCGTCCGGAG
CGCCGTGCGGAGCGCCGTCC

Product: Fe-S oxidoreductase

Products: NA

Alternate protein names: Pyrroloquinoline quinone biosynthesis protein E [H]

Number of amino acids: Translated: 424; Mature: 424

Protein sequence:

>424_residues
MVHNAPLESHREIAAKVKTYLDDESSNWHQLGMRMLTETHPNVRKRTAVNFFINASLVGIPKQREAEKRLGVKVPWAVLM
DPTAKCNLRCIGCWAGDYELRPELSLETMDRICREGGELGIHFYVISGGEPMVRQNDLLELARRHPDKMFHIYSNGTLIT
REFAREAAERGNMVFALSLEGLEASTDARRGKGVFQKVMDAMDILREAGVIYGFSATYTRKNTEELGSEAFIDRMVEKGA
AFGWFFTYIPIGRDVDLELMATPEQRAYMFDRITAFRRTKPIFLVDFWNDGEAAVGCIAGGRKYFHINSAGDVEPCAFAH
YATCNIHEVSVAEALQNPLFKAYQKRQPFSGNLRRPCPIIDHPYVLRDMVKESGAYYTQKSDNETVDEFAEKLAGYAAAW
GELADEIWEKRLAGAPAGMDGGND

Sequences:

>Translated_424_residues
MVHNAPLESHREIAAKVKTYLDDESSNWHQLGMRMLTETHPNVRKRTAVNFFINASLVGIPKQREAEKRLGVKVPWAVLM
DPTAKCNLRCIGCWAGDYELRPELSLETMDRICREGGELGIHFYVISGGEPMVRQNDLLELARRHPDKMFHIYSNGTLIT
REFAREAAERGNMVFALSLEGLEASTDARRGKGVFQKVMDAMDILREAGVIYGFSATYTRKNTEELGSEAFIDRMVEKGA
AFGWFFTYIPIGRDVDLELMATPEQRAYMFDRITAFRRTKPIFLVDFWNDGEAAVGCIAGGRKYFHINSAGDVEPCAFAH
YATCNIHEVSVAEALQNPLFKAYQKRQPFSGNLRRPCPIIDHPYVLRDMVKESGAYYTQKSDNETVDEFAEKLAGYAAAW
GELADEIWEKRLAGAPAGMDGGND
>Mature_424_residues
MVHNAPLESHREIAAKVKTYLDDESSNWHQLGMRMLTETHPNVRKRTAVNFFINASLVGIPKQREAEKRLGVKVPWAVLM
DPTAKCNLRCIGCWAGDYELRPELSLETMDRICREGGELGIHFYVISGGEPMVRQNDLLELARRHPDKMFHIYSNGTLIT
REFAREAAERGNMVFALSLEGLEASTDARRGKGVFQKVMDAMDILREAGVIYGFSATYTRKNTEELGSEAFIDRMVEKGA
AFGWFFTYIPIGRDVDLELMATPEQRAYMFDRITAFRRTKPIFLVDFWNDGEAAVGCIAGGRKYFHINSAGDVEPCAFAH
YATCNIHEVSVAEALQNPLFKAYQKRQPFSGNLRRPCPIIDHPYVLRDMVKESGAYYTQKSDNETVDEFAEKLAGYAAAW
GELADEIWEKRLAGAPAGMDGGND

Specific function: Unknown

COG id: COG0535

COG function: function code R; Predicted Fe-S oxidoreductases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the radical SAM superfamily. PqqE family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR006638
- InterPro:   IPR000385
- InterPro:   IPR017200
- InterPro:   IPR011843
- InterPro:   IPR007197 [H]

Pfam domain/function: PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 47804; Mature: 47804

Theoretical pI: Translated: 6.15; Mature: 6.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVHNAPLESHREIAAKVKTYLDDESSNWHQLGMRMLTETHPNVRKRTAVNFFINASLVGI
CCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHEEEEEEEEEEEECC
PKQREAEKRLGVKVPWAVLMDPTAKCNLRCIGCWAGDYELRPELSLETMDRICREGGELG
CCHHHHHHHCCCCCCCCEEECCCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHCCCCEE
IHFYVISGGEPMVRQNDLLELARRHPDKMFHIYSNGTLITREFAREAAERGNMVFALSLE
EEEEEEECCCCCCCHHHHHHHHHHCCCCEEEEECCCEEEEHHHHHHHHHCCCEEEEEEEC
GLEASTDARRGKGVFQKVMDAMDILREAGVIYGFSATYTRKNTEELGSEAFIDRMVEKGA
CCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEECCEECCCCHHHHHHHHHHHHHHHCCC
AFGWFFTYIPIGRDVDLELMATPEQRAYMFDRITAFRRTKPIFLVDFWNDGEAAVGCIAG
CCEEEEEEEECCCCCCEEEEECCHHHHHHHHHHHHHHCCCCEEEEEECCCCCEEEEEEEC
GRKYFHINSAGDVEPCAFAHYATCNIHEVSVAEALQNPLFKAYQKRQPFSGNLRRPCPII
CEEEEEECCCCCCCCCCEEEEEECCEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
DHPYVLRDMVKESGAYYTQKSDNETVDEFAEKLAGYAAAWGELADEIWEKRLAGAPAGMD
CCCHHHHHHHHHCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
GGND
CCCC
>Mature Secondary Structure
MVHNAPLESHREIAAKVKTYLDDESSNWHQLGMRMLTETHPNVRKRTAVNFFINASLVGI
CCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHEEEEEEEEEEEECC
PKQREAEKRLGVKVPWAVLMDPTAKCNLRCIGCWAGDYELRPELSLETMDRICREGGELG
CCHHHHHHHCCCCCCCCEEECCCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHCCCCEE
IHFYVISGGEPMVRQNDLLELARRHPDKMFHIYSNGTLITREFAREAAERGNMVFALSLE
EEEEEEECCCCCCCHHHHHHHHHHCCCCEEEEECCCEEEEHHHHHHHHHCCCEEEEEEEC
GLEASTDARRGKGVFQKVMDAMDILREAGVIYGFSATYTRKNTEELGSEAFIDRMVEKGA
CCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEECCEECCCCHHHHHHHHHHHHHHHCCC
AFGWFFTYIPIGRDVDLELMATPEQRAYMFDRITAFRRTKPIFLVDFWNDGEAAVGCIAG
CCEEEEEEEECCCCCCEEEEECCHHHHHHHHHHHHHHCCCCEEEEEECCCCCEEEEEEEC
GRKYFHINSAGDVEPCAFAHYATCNIHEVSVAEALQNPLFKAYQKRQPFSGNLRRPCPII
CEEEEEECCCCCCCCCCEEEEEECCEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
DHPYVLRDMVKESGAYYTQKSDNETVDEFAEKLAGYAAAWGELADEIWEKRLAGAPAGMD
CCCHHHHHHHHHCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
GGND
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA