| Definition | Symbiobacterium thermophilum IAM 14863 chromosome, complete genome. |
|---|---|
| Accession | NC_006177 |
| Length | 3,566,135 |
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The map label for this gene is 51893472
Identifier: 51893472
GI number: 51893472
Start: 2521293
End: 2522492
Strand: Reverse
Name: 51893472
Synonym: STH2334
Alternate gene names: NA
Gene position: 2522492-2521293 (Counterclockwise)
Preceding gene: 51893473
Following gene: 51893471
Centisome position: 70.73
GC content: 73.42
Gene sequence:
>1200_bases GTGCGGAGCGCCGTCCGGCCTCGGGGGCCGGACGCCCGGCGGCGCGGCCCGCACAGGGCAGGAGAGGGATCGCCCGCCGT AGTAATGACAAGAGAGCGCACGGCGAGAGGAGGGGCGTGTATGAGGGGAGCGCGTCTTGTGGGTCTGCTCTGCCTCATGG CCCTGCTTCTGGCGGTGCCGGCGCCCCGGGCGCAGGTCGCGGGCGCCGCCGGCCAGGACCGCGCGGCGGTGCTGCAGGAG CTATTCGTCCTCAACCGCCGGCTGGAGGAGGCGCGCGCCGCCCTCGCCGACGTGGAGGCGCGCCTGCGCGCGGTCTCGTC CCAGGAGGAGGCGGCCCTCGCCGACCTGGCCCGCCTGCAGGAGGAGCTGGCCGCCCGCAGGGAGCAGTACGGCCGTCGGC TCCGGTACTATCGGGAGCAGGGCAACCGGGGCCCGTGGGTGCTGCTGCTTACCGCCGGGTCGCTGGCGGATTTCCTCTGG CGGCTGGACGCGCTGAAGCAGATCATGGACTACGACGCCCGCCTGGCCCGGGTGCTCATGGAGACGCAGGCGGCGGTGGC GGCCCAGGCGGAGCGGCTGGCGCAGGCCCGGGCCGAGGCCGACCGGCTGCGGGACGAGCAGCTCGCCCGGGTGGCGGAGC TGGAGGCGGCCATCGCAGACCGTGAGGCGATCCTGGCGGGCCTCGGCGACGAGCGTGCCGAGGTGGAGGAAGCCCTGGCG GCGGTGGAGGCCGACTGGCAGCAGAGCGCCATGCCTGTCCTGGACGCCCTCGGGCAGGCTCTGCAGCAGTTGGGCACCGC GGGTCTCCAGCCCGACGACCTCCGCTTCTCCCTGTTCCCGCCGAGCGCGGTGGCCACCATCACCGAGGAGCAGCTCAACG CCTACATCGGCGGCTACGACGCGCTCGCCGGCCTGCGTGTGGACCTGGTGGGGGAGGAGGAGGCCTTCGTGCTCTCCGGG ACGTTCGCGGACGTACCGGTGGAGATCAGCGGCGGCTTCCTGGTGCTGCCCGACGGCAGGCTGCGGTTCGAGCCCTCGTT GATGCAGGTGCGCGAGTTCCGGGTGCCTGAAGGCGTCATCGCCGAGATCGTGTCCCAGGGTCTGCTGGACATCGACGTGA GCTCCCTGGTGGCGCCGCTTACGCTCACCGGGGTCGAGCTGACCGACGGGCGGATGACCGTCCGGGCCGGCCTGAGATGA
Upstream 100 bases:
>100_bases CGGGGGCAACGACTGAGCCGGGAAGGTCAACCTGACGGGCGAGTGTGGGGCGCTGCACCTCTGATGCGGCGCCCCGCTGC GCGCCGCCGTCCGGAGCGCC
Downstream 100 bases:
>100_bases GCGGTCGGCGGACCCCTGACGCTTAGAATTATGGAAGAGCCGGGTCTCCCTCAGCGGAGCCCGGTTCTTTTGTGTCGGCC CGGCCGAGCCTGCCGATGCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 399; Mature: 399
Protein sequence:
>399_residues MRSAVRPRGPDARRRGPHRAGEGSPAVVMTRERTARGGACMRGARLVGLLCLMALLLAVPAPRAQVAGAAGQDRAAVLQE LFVLNRRLEEARAALADVEARLRAVSSQEEAALADLARLQEELAARREQYGRRLRYYREQGNRGPWVLLLTAGSLADFLW RLDALKQIMDYDARLARVLMETQAAVAAQAERLAQARAEADRLRDEQLARVAELEAAIADREAILAGLGDERAEVEEALA AVEADWQQSAMPVLDALGQALQQLGTAGLQPDDLRFSLFPPSAVATITEEQLNAYIGGYDALAGLRVDLVGEEEAFVLSG TFADVPVEISGGFLVLPDGRLRFEPSLMQVREFRVPEGVIAEIVSQGLLDIDVSSLVAPLTLTGVELTDGRMTVRAGLR
Sequences:
>Translated_399_residues MRSAVRPRGPDARRRGPHRAGEGSPAVVMTRERTARGGACMRGARLVGLLCLMALLLAVPAPRAQVAGAAGQDRAAVLQE LFVLNRRLEEARAALADVEARLRAVSSQEEAALADLARLQEELAARREQYGRRLRYYREQGNRGPWVLLLTAGSLADFLW RLDALKQIMDYDARLARVLMETQAAVAAQAERLAQARAEADRLRDEQLARVAELEAAIADREAILAGLGDERAEVEEALA AVEADWQQSAMPVLDALGQALQQLGTAGLQPDDLRFSLFPPSAVATITEEQLNAYIGGYDALAGLRVDLVGEEEAFVLSG TFADVPVEISGGFLVLPDGRLRFEPSLMQVREFRVPEGVIAEIVSQGLLDIDVSSLVAPLTLTGVELTDGRMTVRAGLR >Mature_399_residues MRSAVRPRGPDARRRGPHRAGEGSPAVVMTRERTARGGACMRGARLVGLLCLMALLLAVPAPRAQVAGAAGQDRAAVLQE LFVLNRRLEEARAALADVEARLRAVSSQEEAALADLARLQEELAARREQYGRRLRYYREQGNRGPWVLLLTAGSLADFLW RLDALKQIMDYDARLARVLMETQAAVAAQAERLAQARAEADRLRDEQLARVAELEAAIADREAILAGLGDERAEVEEALA AVEADWQQSAMPVLDALGQALQQLGTAGLQPDDLRFSLFPPSAVATITEEQLNAYIGGYDALAGLRVDLVGEEEAFVLSG TFADVPVEISGGFLVLPDGRLRFEPSLMQVREFRVPEGVIAEIVSQGLLDIDVSSLVAPLTLTGVELTDGRMTVRAGLR
Specific function: Unknown
COG id: COG3883
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43203; Mature: 43203
Theoretical pI: Translated: 4.71; Mature: 4.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRSAVRPRGPDARRRGPHRAGEGSPAVVMTRERTARGGACMRGARLVGLLCLMALLLAVP CCCCCCCCCCCHHHCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCC APRAQVAGAAGQDRAAVLQELFVLNRRLEEARAALADVEARLRAVSSQEEAALADLARLQ CCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH EELAARREQYGRRLRYYREQGNRGPWVLLLTAGSLADFLWRLDALKQIMDYDARLARVLM HHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHH ETQAAVAAQAERLAQARAEADRLRDEQLARVAELEAAIADREAILAGLGDERAEVEEALA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH AVEADWQQSAMPVLDALGQALQQLGTAGLQPDDLRFSLFPPSAVATITEEQLNAYIGGYD HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHCCHH ALAGLRVDLVGEEEAFVLSGTFADVPVEISGGFLVLPDGRLRFEPSLMQVREFRVPEGVI HHHCCEEEEECCCCEEEEECCCCCCCEEECCCEEEECCCCEEECHHHHHHHHHCCCHHHH AEIVSQGLLDIDVSSLVAPLTLTGVELTDGRMTVRAGLR HHHHHCCCHHCCHHHHHHHHEEECEEEECCCEEEECCCC >Mature Secondary Structure MRSAVRPRGPDARRRGPHRAGEGSPAVVMTRERTARGGACMRGARLVGLLCLMALLLAVP CCCCCCCCCCCHHHCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCC APRAQVAGAAGQDRAAVLQELFVLNRRLEEARAALADVEARLRAVSSQEEAALADLARLQ CCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH EELAARREQYGRRLRYYREQGNRGPWVLLLTAGSLADFLWRLDALKQIMDYDARLARVLM HHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHH ETQAAVAAQAERLAQARAEADRLRDEQLARVAELEAAIADREAILAGLGDERAEVEEALA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH AVEADWQQSAMPVLDALGQALQQLGTAGLQPDDLRFSLFPPSAVATITEEQLNAYIGGYD HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHCCHH ALAGLRVDLVGEEEAFVLSGTFADVPVEISGGFLVLPDGRLRFEPSLMQVREFRVPEGVI HHHCCEEEEECCCCEEEEECCCCCCCEEECCCEEEECCCCEEECHHHHHHHHHCCCHHHH AEIVSQGLLDIDVSSLVAPLTLTGVELTDGRMTVRAGLR HHHHHCCCHHCCHHHHHHHHEEECEEEECCCEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA