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The map label for this gene is dppB [H]

Identifier: 51893452

GI number: 51893452

Start: 2499137

End: 2500087

Strand: Reverse

Name: dppB [H]

Synonym: STH2314

Alternate gene names: 51893452

Gene position: 2500087-2499137 (Counterclockwise)

Preceding gene: 51893453

Following gene: 51893451

Centisome position: 70.11

GC content: 68.14

Gene sequence:

>951_bases
GTGCTGGTGGTCATCTTCGTGCTCATGCGCGCCATCCCCGGCGACCCCGCCCGGCTGATGCTGGGCGAGCGGGCCTCGCC
GGAGGCGGTCGCCGCCCTGCGTGAGCAGATGGGGCTCAACGATCCGCTCTACGTGCAGTTCTTCACCTTCCTGGGCGACG
TGCTGCGGGGCGACCTGGGCGTGTCGCTGCAGAGCCGCCAGCCGGTGACGGCGGAGCTCATGGCCCGCTACCCCGCCACG
GTGGAGCTGGCCATTTTCGCCATGCTGCTGGCCTCGGTCCTGGGCATCCTGGCCGGCGTGGTCTCCGCCGTGTGGCGCAA
TTCGCTGCTGGATTACGGCGTGATGGCCGCGGCCCTGGTGGGGGTCTCCATGCCGATCTTCTGGCTGGGCCTGGTCCTCA
TGATGTTGTTCTCCGTGCGGCTGCACTGGCTGCCCGCCGGGGGACGGCTCGACGCCCGGATGATCTGGGACGGCGCCACC
CAGTTCGTGGTCCTGGAGAGCCTCGTGCGGGGGCACTGGACGGTCTTCGTCACCGGTCTGCGCCACCTGATCCTGCCGGG
GATCGCCCTGGCCACCATCCCGCTGTCCATCATCGCCCGGATCACCCGCTCCTCCATGCTGGAGGTGCTGAACCTGGACT
ACATCCGCACCGCCAGGGCAAAGGGGTTGCCCAACTGGCGGGTGAACTTCCGGCACGCGCTGAAGAATGCCCTGCTGCCG
GTGGTCACCATCATCGGCCTGCAGGTGGGGCTGCTCCTGGGCGGCGCCGTGCTGACGGAGACCATCTTCTCCTGGCCCGG
CATCGGCCGCTACATCGTGATGGCCATCAGCGCCCGGGACTACCCGGTGGTGCAGGGAGGCATCCTGCTGATCACCCTGG
CGATGATTCTGGTCAACCTGCTGGTCGACGTCATCTACACGCTGATCGACCCGCGCATCCGCTACCAGTAG

Upstream 100 bases:

>100_bases
GGGCGGCGTCTGCCGCCCCCCTCCGGGCACACAGGGAGGGATCGCTATCGTCCGCTATCTGGCCAAGCGGATCGGCCTGG
CCATCCCCACCGCCCTGGGG

Downstream 100 bases:

>100_bases
GGAGGGGGCGACGAGATGGCCGTCATCGATCCGCGCACGCCAGCCGTAGGCGGCCCGCCGAGCCCGGCGCAGGGCGCGCC
GCCTGTGGCTCCAGGCGTCA

Product: oligopeptide ABC transporter permease protein

Products: ADP; phosphate; dipeptides [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 316; Mature: 316

Protein sequence:

>316_residues
MLVVIFVLMRAIPGDPARLMLGERASPEAVAALREQMGLNDPLYVQFFTFLGDVLRGDLGVSLQSRQPVTAELMARYPAT
VELAIFAMLLASVLGILAGVVSAVWRNSLLDYGVMAAALVGVSMPIFWLGLVLMMLFSVRLHWLPAGGRLDARMIWDGAT
QFVVLESLVRGHWTVFVTGLRHLILPGIALATIPLSIIARITRSSMLEVLNLDYIRTARAKGLPNWRVNFRHALKNALLP
VVTIIGLQVGLLLGGAVLTETIFSWPGIGRYIVMAISARDYPVVQGGILLITLAMILVNLLVDVIYTLIDPRIRYQ

Sequences:

>Translated_316_residues
MLVVIFVLMRAIPGDPARLMLGERASPEAVAALREQMGLNDPLYVQFFTFLGDVLRGDLGVSLQSRQPVTAELMARYPAT
VELAIFAMLLASVLGILAGVVSAVWRNSLLDYGVMAAALVGVSMPIFWLGLVLMMLFSVRLHWLPAGGRLDARMIWDGAT
QFVVLESLVRGHWTVFVTGLRHLILPGIALATIPLSIIARITRSSMLEVLNLDYIRTARAKGLPNWRVNFRHALKNALLP
VVTIIGLQVGLLLGGAVLTETIFSWPGIGRYIVMAISARDYPVVQGGILLITLAMILVNLLVDVIYTLIDPRIRYQ
>Mature_316_residues
MLVVIFVLMRAIPGDPARLMLGERASPEAVAALREQMGLNDPLYVQFFTFLGDVLRGDLGVSLQSRQPVTAELMARYPAT
VELAIFAMLLASVLGILAGVVSAVWRNSLLDYGVMAAALVGVSMPIFWLGLVLMMLFSVRLHWLPAGGRLDARMIWDGAT
QFVVLESLVRGHWTVFVTGLRHLILPGIALATIPLSIIARITRSSMLEVLNLDYIRTARAKGLPNWRVNFRHALKNALLP
VVTIIGLQVGLLLGGAVLTETIFSWPGIGRYIVMAISARDYPVVQGGILLITLAMILVNLLVDVIYTLIDPRIRYQ

Specific function: Part of the binding-protein-dependent transport system for dipeptides; probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0601

COG function: function code EP; ABC-type dipeptide/oligopeptide/nickel transport systems, permease components

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1789965, Length=315, Percent_Identity=51.1111111111111, Blast_Score=313, Evalue=1e-86,
Organism=Escherichia coli, GI1787761, Length=316, Percent_Identity=50, Blast_Score=269, Evalue=2e-73,
Organism=Escherichia coli, GI1787053, Length=314, Percent_Identity=41.7197452229299, Blast_Score=261, Evalue=6e-71,
Organism=Escherichia coli, GI1789888, Length=315, Percent_Identity=39.0476190476191, Blast_Score=215, Evalue=3e-57,
Organism=Escherichia coli, GI1787497, Length=317, Percent_Identity=39.1167192429022, Blast_Score=212, Evalue=2e-56,
Organism=Escherichia coli, GI1787550, Length=267, Percent_Identity=35.5805243445693, Blast_Score=171, Evalue=8e-44,
Organism=Escherichia coli, GI1788504, Length=299, Percent_Identity=27.7591973244147, Blast_Score=122, Evalue=4e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 34677; Mature: 34677

Theoretical pI: Translated: 10.21; Mature: 10.21

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLVVIFVLMRAIPGDPARLMLGERASPEAVAALREQMGLNDPLYVQFFTFLGDVLRGDLG
CHHHHHHHHHHCCCCCHHHHCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCC
VSLQSRQPVTAELMARYPATVELAIFAMLLASVLGILAGVVSAVWRNSLLDYGVMAAALV
CCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GVSMPIFWLGLVLMMLFSVRLHWLPAGGRLDARMIWDGATQFVVLESLVRGHWTVFVTGL
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHH
RHLILPGIALATIPLSIIARITRSSMLEVLNLDYIRTARAKGLPNWRVNFRHALKNALLP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
VVTIIGLQVGLLLGGAVLTETIFSWPGIGRYIVMAISARDYPVVQGGILLITLAMILVNL
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHEEEECCCCCCCHHCCHHHHHHHHHHHHH
LVDVIYTLIDPRIRYQ
HHHHHHHHHCCCCCCC
>Mature Secondary Structure
MLVVIFVLMRAIPGDPARLMLGERASPEAVAALREQMGLNDPLYVQFFTFLGDVLRGDLG
CHHHHHHHHHHCCCCCHHHHCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCC
VSLQSRQPVTAELMARYPATVELAIFAMLLASVLGILAGVVSAVWRNSLLDYGVMAAALV
CCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GVSMPIFWLGLVLMMLFSVRLHWLPAGGRLDARMIWDGATQFVVLESLVRGHWTVFVTGL
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHH
RHLILPGIALATIPLSIIARITRSSMLEVLNLDYIRTARAKGLPNWRVNFRHALKNALLP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
VVTIIGLQVGLLLGGAVLTETIFSWPGIGRYIVMAISARDYPVVQGGILLITLAMILVNL
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHEEEECCCCCCCHHCCHHHHHHHHHHHHH
LVDVIYTLIDPRIRYQ
HHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; dipeptides [Periplasm]; H2O [C]

Specific reaction: ATP + dipeptides [Periplasm] + H2O = ADP + phosphate + dipeptides [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9680333 [H]