| Definition | Symbiobacterium thermophilum IAM 14863 chromosome, complete genome. |
|---|---|
| Accession | NC_006177 |
| Length | 3,566,135 |
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The map label for this gene is 51893407
Identifier: 51893407
GI number: 51893407
Start: 2438868
End: 2439098
Strand: Reverse
Name: 51893407
Synonym: STH2269
Alternate gene names: NA
Gene position: 2439098-2438868 (Counterclockwise)
Preceding gene: 51893408
Following gene: 51893405
Centisome position: 68.4
GC content: 61.47
Gene sequence:
>231_bases ATGGGTTTGGGACGCAGCGGGACACAGAGAGCGCCGAAACGAAGGGGGAGGGAGCGGCATTACTTTTCCCTTGATCGCCA TGGGCACTTCTCTGCCCGCCGGAGCATCAAACAGAAGTGCAACGGCAGATGGTGGAGCAGATCCTCGCGCTGCACCCGGA TCTTGCCCTGGCGCACTCCCTCCTGCAGCGTTTTCGCCAGATGCTCCGTGAGCACCAAGTGGGCGAGTTGA
Upstream 100 bases:
>100_bases CCTGCCGAATCCCTCCGATAACCTGATACCCAAGCCCACTCCGATTACACGATAATGTTATTCTGCGGCCCTTGGCATAC TCTGCCGAGGGCCGTTTGAC
Downstream 100 bases:
>100_bases ACCGTTGGCTGGATGATGCAATGGCCAGTGGTTTACCCCCGTTCACGCGACTTGCCAGGACCCTGACGGCCGACAAGGCT GCGGTTCTAGCCGCCATCGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 76; Mature: 75
Protein sequence:
>76_residues MGLGRSGTQRAPKRRGRERHYFSLDRHGHFSARRSIKQKCNGRWWSRSSRCTRILPWRTPSCSVFARCSVSTKWAS
Sequences:
>Translated_76_residues MGLGRSGTQRAPKRRGRERHYFSLDRHGHFSARRSIKQKCNGRWWSRSSRCTRILPWRTPSCSVFARCSVSTKWAS >Mature_75_residues GLGRSGTQRAPKRRGRERHYFSLDRHGHFSARRSIKQKCNGRWWSRSSRCTRILPWRTPSCSVFARCSVSTKWAS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8924; Mature: 8793
Theoretical pI: Translated: 12.45; Mature: 12.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 6.6 %Cys+Met (Translated Protein) 5.3 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGLGRSGTQRAPKRRGRERHYFSLDRHGHFSARRSIKQKCNGRWWSRSSRCTRILPWRTP CCCCCCCCCCCHHHCCCCCCEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCEEECCCCCC SCSVFARCSVSTKWAS CCCEEEEECCCCCCCC >Mature Secondary Structure GLGRSGTQRAPKRRGRERHYFSLDRHGHFSARRSIKQKCNGRWWSRSSRCTRILPWRTP CCCCCCCCCCHHHCCCCCCEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCEEECCCCCC SCSVFARCSVSTKWAS CCCEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA