| Definition | Symbiobacterium thermophilum IAM 14863 chromosome, complete genome. |
|---|---|
| Accession | NC_006177 |
| Length | 3,566,135 |
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The map label for this gene is 51893400
Identifier: 51893400
GI number: 51893400
Start: 2429424
End: 2431034
Strand: Reverse
Name: 51893400
Synonym: STH2262
Alternate gene names: NA
Gene position: 2431034-2429424 (Counterclockwise)
Preceding gene: 51893401
Following gene: 51893399
Centisome position: 68.17
GC content: 61.82
Gene sequence:
>1611_bases ATGCAGTCTCATGGTACGACGCCCGAAGTCACTGCGCAAGCCATCAAATCCACCACCCGGCATGGTTTTCTTGTCGCTCT TGGTTGGGTAGCGCAAAGGCTGAACCTGGTTGACGTGTTGAACCGGCACCTGCGGATCAATCAGAAGACCTACACCCATA CGCCGGTCGACAAGGTAGTCGAGGCGTTGGTTGCCATTCTCGGCAACTGCCGCTACATGAAGGACCTGAACTTCGATCCC GAGCCGCTGGTCGCCGACCCTGCCGTAGCTCAAGCCTGGGGGCAGGAACGCTTTGCTCACTTCTCCACCGTCTGTGCGAC CTTTAGCAAACTAACGGAGGAAAACGTTCAACAACTTTCCGATGCACTGGCGGAGATCCAGGCTCCCCTGCTTCAGCAGG AGGTTGCGGCGGTGGCGGGCCCAGACCGGTCCGGAATGGTCATCGTGGACATCGACCTCACCGGCCAGAAGGTTCGGGGC GAGACCAGGCAGTACACCGGTACCGACTTCGGCTACATCCAGGGGAAGTTGGCCCGAGGCTATCAGATCGCAGCCGCCTT CCTCAGCGGGAAGCAGCAGCGCTTTGCCATCGACGGCCTTCTCAAGTCCGGCAAGGCCAACAGCCGTTCCGGCGCCTGCC TGCTCGAACTGATTCCCAGGATCGAAGCCCGGATTGGTCGTCCCCTGCGGCGAGTCGAATGGGTCGAGGCATGCCTGGCT CAGCAGAAGGCTCGGGTCAGGCAGCTGTATCAGCAACTGCAGACGGTATCAGGCAAGGGCAGCGCCCGCCGGAAGCAGAA GCTGCAGCGTGAGTTCCAGGAGGAGGTTCAGCACCTCCGTGAAGTGAACCAGCGACTCCGGCAGTACCGGCAGGAGAATC GGACGAACCCGGCTCCCCTCCGGATCGTGCTGCGAGCCGACAGCGCCTTTGGCACGCCGGAGGTGATCCAGCGGCTGCTG GAGCTGGGATACGAGTTCACCATCAAGTCCTACTCCGGAAGCAATCCCGCCTACAAGCGCCTCTTCGACGCCGTGCCGGC GGAGGGCTGGGTTGAAGTCGAGAAGAACCGGTTTGCCTCCGAAGCCGTTACCGTACCTGGCCCCACTTTGCTCGCACCGT ATCCGGTGCGACTGGTCGCCATGCGCCGCTGGGACGCCGATGGCCGGGAGGTCCGCAGCGTCATCCTGACTACGCTCCAG CCTGAGGAGCTCACCACGACAGAGGTCGTCAAGCTCTACCATGGACGGCAGACCATCGAAGCCGGGTTCCAGGAGTGGAA GGGAACGTTCCACTTTGGTACTCCTCGGATGCGGAAGTATGAGGCCAACGCCGCCTTCACGCAGCTGGTCTTGTTCGCCT TCAACCTGGTGCGCTGGGCTTGGCGGTTTCTGAGCACGAACTCGCCCAAACTGGCCGAGGCGGGGAGTCGACTCTTGGTA CGAGTAGCGGCCCGGTGCCGAGCAACCATTCGGTGCCTCGGCGACACGCTGCGGTTGGTGTTCAGCCGGGGTACTCCCCT GGCTGGAGCTGAGATTACCCTGAACCGGGCCACTCCCTACCCATACGCCCTTTTAACACCACGAATGTCGAGTTGTTCGC GTGAAACTTGA
Upstream 100 bases:
>100_bases GCACTCCGTACAATGGAAACCCATTGAAAAAGCATCAGTCTGAACCAATGATACATGGTGGGATTTGCCCCTCTTAAACC ACCATGTGGAGGTTCGACTG
Downstream 100 bases:
>100_bases GCTAGGCCTTGCGTGTGTTGACGAGAACGAGTGAGCCCCATAACCGGGGCTTTCCTTGTTTGCAGGTATTTCCCCTTCAC CCGCCGAATTGTCGCACTAT
Product: putative DNA methylase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 536; Mature: 536
Protein sequence:
>536_residues MQSHGTTPEVTAQAIKSTTRHGFLVALGWVAQRLNLVDVLNRHLRINQKTYTHTPVDKVVEALVAILGNCRYMKDLNFDP EPLVADPAVAQAWGQERFAHFSTVCATFSKLTEENVQQLSDALAEIQAPLLQQEVAAVAGPDRSGMVIVDIDLTGQKVRG ETRQYTGTDFGYIQGKLARGYQIAAAFLSGKQQRFAIDGLLKSGKANSRSGACLLELIPRIEARIGRPLRRVEWVEACLA QQKARVRQLYQQLQTVSGKGSARRKQKLQREFQEEVQHLREVNQRLRQYRQENRTNPAPLRIVLRADSAFGTPEVIQRLL ELGYEFTIKSYSGSNPAYKRLFDAVPAEGWVEVEKNRFASEAVTVPGPTLLAPYPVRLVAMRRWDADGREVRSVILTTLQ PEELTTTEVVKLYHGRQTIEAGFQEWKGTFHFGTPRMRKYEANAAFTQLVLFAFNLVRWAWRFLSTNSPKLAEAGSRLLV RVAARCRATIRCLGDTLRLVFSRGTPLAGAEITLNRATPYPYALLTPRMSSCSRET
Sequences:
>Translated_536_residues MQSHGTTPEVTAQAIKSTTRHGFLVALGWVAQRLNLVDVLNRHLRINQKTYTHTPVDKVVEALVAILGNCRYMKDLNFDP EPLVADPAVAQAWGQERFAHFSTVCATFSKLTEENVQQLSDALAEIQAPLLQQEVAAVAGPDRSGMVIVDIDLTGQKVRG ETRQYTGTDFGYIQGKLARGYQIAAAFLSGKQQRFAIDGLLKSGKANSRSGACLLELIPRIEARIGRPLRRVEWVEACLA QQKARVRQLYQQLQTVSGKGSARRKQKLQREFQEEVQHLREVNQRLRQYRQENRTNPAPLRIVLRADSAFGTPEVIQRLL ELGYEFTIKSYSGSNPAYKRLFDAVPAEGWVEVEKNRFASEAVTVPGPTLLAPYPVRLVAMRRWDADGREVRSVILTTLQ PEELTTTEVVKLYHGRQTIEAGFQEWKGTFHFGTPRMRKYEANAAFTQLVLFAFNLVRWAWRFLSTNSPKLAEAGSRLLV RVAARCRATIRCLGDTLRLVFSRGTPLAGAEITLNRATPYPYALLTPRMSSCSRET >Mature_536_residues MQSHGTTPEVTAQAIKSTTRHGFLVALGWVAQRLNLVDVLNRHLRINQKTYTHTPVDKVVEALVAILGNCRYMKDLNFDP EPLVADPAVAQAWGQERFAHFSTVCATFSKLTEENVQQLSDALAEIQAPLLQQEVAAVAGPDRSGMVIVDIDLTGQKVRG ETRQYTGTDFGYIQGKLARGYQIAAAFLSGKQQRFAIDGLLKSGKANSRSGACLLELIPRIEARIGRPLRRVEWVEACLA QQKARVRQLYQQLQTVSGKGSARRKQKLQREFQEEVQHLREVNQRLRQYRQENRTNPAPLRIVLRADSAFGTPEVIQRLL ELGYEFTIKSYSGSNPAYKRLFDAVPAEGWVEVEKNRFASEAVTVPGPTLLAPYPVRLVAMRRWDADGREVRSVILTTLQ PEELTTTEVVKLYHGRQTIEAGFQEWKGTFHFGTPRMRKYEANAAFTQLVLFAFNLVRWAWRFLSTNSPKLAEAGSRLLV RVAARCRATIRCLGDTLRLVFSRGTPLAGAEITLNRATPYPYALLTPRMSSCSRET
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 60268; Mature: 60268
Theoretical pI: Translated: 10.28; Mature: 10.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQSHGTTPEVTAQAIKSTTRHGFLVALGWVAQRLNLVDVLNRHLRINQKTYTHTPVDKVV CCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCHHHHH EALVAILGNCRYMKDLNFDPEPLVADPAVAQAWGQERFAHFSTVCATFSKLTEENVQQLS HHHHHHHHCCCEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DALAEIQAPLLQQEVAAVAGPDRSGMVIVDIDLTGQKVRGETRQYTGTDFGYIQGKLARG HHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCHHCCCCCCCCCCCCHHHHHHHHCC YQIAAAFLSGKQQRFAIDGLLKSGKANSRSGACLLELIPRIEARIGRPLRRVEWVEACLA HHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHH QQKARVRQLYQQLQTVSGKGSARRKQKLQREFQEEVQHLREVNQRLRQYRQENRTNPAPL HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCE RIVLRADSAFGTPEVIQRLLELGYEFTIKSYSGSNPAYKRLFDAVPAEGWVEVEKNRFAS EEEEECCCCCCCHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHCCCCCCEEEHHHHHHH EAVTVPGPTLLAPYPVRLVAMRRWDADGREVRSVILTTLQPEELTTTEVVKLYHGRQTIE CCEECCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHCHHHHH AGFQEWKGTFHFGTPRMRKYEANAAFTQLVLFAFNLVRWAWRFLSTNSPKLAEAGSRLLV HHHHHCCCEEECCCCCHHHEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH RVAARCRATIRCLGDTLRLVFSRGTPLAGAEITLNRATPYPYALLTPRMSSCSRET HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCEEEECCCHHCCCCCC >Mature Secondary Structure MQSHGTTPEVTAQAIKSTTRHGFLVALGWVAQRLNLVDVLNRHLRINQKTYTHTPVDKVV CCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCHHHHH EALVAILGNCRYMKDLNFDPEPLVADPAVAQAWGQERFAHFSTVCATFSKLTEENVQQLS HHHHHHHHCCCEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DALAEIQAPLLQQEVAAVAGPDRSGMVIVDIDLTGQKVRGETRQYTGTDFGYIQGKLARG HHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCHHCCCCCCCCCCCCHHHHHHHHCC YQIAAAFLSGKQQRFAIDGLLKSGKANSRSGACLLELIPRIEARIGRPLRRVEWVEACLA HHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHH QQKARVRQLYQQLQTVSGKGSARRKQKLQREFQEEVQHLREVNQRLRQYRQENRTNPAPL HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCE RIVLRADSAFGTPEVIQRLLELGYEFTIKSYSGSNPAYKRLFDAVPAEGWVEVEKNRFAS EEEEECCCCCCCHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHCCCCCCEEEHHHHHHH EAVTVPGPTLLAPYPVRLVAMRRWDADGREVRSVILTTLQPEELTTTEVVKLYHGRQTIE CCEECCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHCHHHHH AGFQEWKGTFHFGTPRMRKYEANAAFTQLVLFAFNLVRWAWRFLSTNSPKLAEAGSRLLV HHHHHCCCEEECCCCCHHHEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH RVAARCRATIRCLGDTLRLVFSRGTPLAGAEITLNRATPYPYALLTPRMSSCSRET HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCEEEECCCHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA