| Definition | Symbiobacterium thermophilum IAM 14863 chromosome, complete genome. |
|---|---|
| Accession | NC_006177 |
| Length | 3,566,135 |
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The map label for this gene is 51893399
Identifier: 51893399
GI number: 51893399
Start: 2428181
End: 2429368
Strand: Reverse
Name: 51893399
Synonym: STH2261
Alternate gene names: NA
Gene position: 2429368-2428181 (Counterclockwise)
Preceding gene: 51893400
Following gene: 51893398
Centisome position: 68.12
GC content: 67.76
Gene sequence:
>1188_bases TTGTTTGCAGGTATTTCCCCTTCACCCGCCGAATTGTCGCACTATCGAAAACCAACCTCATTCGCAATCGACGTCACACC GGAGGCAGCCACGATGACCACAGCCCCGCACCTGCGCCTCAACGCCCTGTGCCCCTACTTCACCATGTTCCCCCTCGACT TCCCCACCCGGTATCTGGCCCAGGCCCGGCCGGGCGAGTGGGTGCTCGACCCTTTCTGCGGCCGGGGAACCACAAACTAC GCGGCGCGTCTTCACGGCCTTCCCACCGTCGGCATCGACAGCAGCCCCGTGGCGGTGGCGATTGCCCGGGCCAAGCTGGT CCAGGTCACCCCCGACGAACTGATCGCCGAGGCGGAACGCATCCTCGCCGGGCCCGAGCCGGCCGACGTGCCGGAGGGCC ACTTCTGGGACCTCGCCTACCACCCCCGCACCCTGCTCGACATCTGCCGGTTGCGGGAGGCGCTTCTGCGCGACTGCGAA GCGCCTGTGCGCATCGCCCTGCGGGGGCTTATCCTCGGCATCCTTCACGGTCCCCGAACCAGGCGGGCGCCTTCCTACCT GTCGAATCAGATGCCCCGTACGTATGCCACCAAGCCCGATCCCGCGGTCCGCTTCTGGGTCCGCAGGGGGATGAGGCCCG AAGAAGTGGACGTACTGGACGTCCTCGCCCGCCGGGCCCGGTATAGCTTCGCCGCGCTGCCTCCGCCGGTCCCGGGGTGC ATCCTCCAGGCCGACAGCCGGGAGCCCGGTGCCATCCCCGTCGTAGATGGGGGGTACCGATGGGTGATCACCTCGCCGCC CTACCTCGGCATGCGCTCCTACCAGCCGGATCAGTGGCTGCGGCTCTGGTTCCTGGGTGGAGAGCCCACCGTACGGTACA TCCACGAGGGACAGGTGAGCCACTTGCAGGGAGAGTACCAGCGCGACCTTGCAACCGTCTGGCGGAACGTCGCGGCTCGG TGCCGACCGGGGACCAGGCTGATCATCCGCTTCGGCTGCCTCCCCACCCTGCCTTGCAATCCAAAGCAGGTGCTGGAGGA GACCCTGGCGAGGTCGGGTGTACCCTGGCGCATCGTGGAGGTTACAGGCGCCGGCATCCCGCCGCGGCACCGGCGCCAGG CCGTACAGTTTGAGAAAACCCGCCCGGCTCACGAGGAGATCGACCTCGTGGCCGTCTTGGGGGAGTGA
Upstream 100 bases:
>100_bases GCCCTTTTAACACCACGAATGTCGAGTTGTTCGCGTGAAACTTGAGCTAGGCCTTGCGTGTGTTGACGAGAACGAGTGAG CCCCATAACCGGGGCTTTCC
Downstream 100 bases:
>100_bases ATCGATGCTGCACCCAGATGCATTGACGGGCATCAAGGAGCAGATCATCCGGCTCGCGGAGGCCGACCGCGCCCTGTTGG ACGACCTGCGCCGGGAGGTG
Product: putative DNA modification methylase
Products: NA
Alternate protein names: Methyltransferase DNA; DNA Methylase N-4/N-6 Domain Protein
Number of amino acids: Translated: 395; Mature: 395
Protein sequence:
>395_residues MFAGISPSPAELSHYRKPTSFAIDVTPEAATMTTAPHLRLNALCPYFTMFPLDFPTRYLAQARPGEWVLDPFCGRGTTNY AARLHGLPTVGIDSSPVAVAIARAKLVQVTPDELIAEAERILAGPEPADVPEGHFWDLAYHPRTLLDICRLREALLRDCE APVRIALRGLILGILHGPRTRRAPSYLSNQMPRTYATKPDPAVRFWVRRGMRPEEVDVLDVLARRARYSFAALPPPVPGC ILQADSREPGAIPVVDGGYRWVITSPPYLGMRSYQPDQWLRLWFLGGEPTVRYIHEGQVSHLQGEYQRDLATVWRNVAAR CRPGTRLIIRFGCLPTLPCNPKQVLEETLARSGVPWRIVEVTGAGIPPRHRRQAVQFEKTRPAHEEIDLVAVLGE
Sequences:
>Translated_395_residues MFAGISPSPAELSHYRKPTSFAIDVTPEAATMTTAPHLRLNALCPYFTMFPLDFPTRYLAQARPGEWVLDPFCGRGTTNY AARLHGLPTVGIDSSPVAVAIARAKLVQVTPDELIAEAERILAGPEPADVPEGHFWDLAYHPRTLLDICRLREALLRDCE APVRIALRGLILGILHGPRTRRAPSYLSNQMPRTYATKPDPAVRFWVRRGMRPEEVDVLDVLARRARYSFAALPPPVPGC ILQADSREPGAIPVVDGGYRWVITSPPYLGMRSYQPDQWLRLWFLGGEPTVRYIHEGQVSHLQGEYQRDLATVWRNVAAR CRPGTRLIIRFGCLPTLPCNPKQVLEETLARSGVPWRIVEVTGAGIPPRHRRQAVQFEKTRPAHEEIDLVAVLGE >Mature_395_residues MFAGISPSPAELSHYRKPTSFAIDVTPEAATMTTAPHLRLNALCPYFTMFPLDFPTRYLAQARPGEWVLDPFCGRGTTNY AARLHGLPTVGIDSSPVAVAIARAKLVQVTPDELIAEAERILAGPEPADVPEGHFWDLAYHPRTLLDICRLREALLRDCE APVRIALRGLILGILHGPRTRRAPSYLSNQMPRTYATKPDPAVRFWVRRGMRPEEVDVLDVLARRARYSFAALPPPVPGC ILQADSREPGAIPVVDGGYRWVITSPPYLGMRSYQPDQWLRLWFLGGEPTVRYIHEGQVSHLQGEYQRDLATVWRNVAAR CRPGTRLIIRFGCLPTLPCNPKQVLEETLARSGVPWRIVEVTGAGIPPRHRRQAVQFEKTRPAHEEIDLVAVLGE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44173; Mature: 44173
Theoretical pI: Translated: 8.87; Mature: 8.87
Prosite motif: PS00093 N4_MTASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFAGISPSPAELSHYRKPTSFAIDVTPEAATMTTAPHLRLNALCPYFTMFPLDFPTRYLA CCCCCCCCHHHHHHCCCCCCEEEEECCCCCEEECCCCEEEECCCCHHHCCCCCCCHHHHH QARPGEWVLDPFCGRGTTNYAARLHGLPTVGIDSSPVAVAIARAKLVQVTPDELIAEAER HCCCCCEEECCCCCCCCCCHHHHHCCCCCCCCCCCCCEEEEEHHEEEEECHHHHHHHHHH ILAGPEPADVPEGHFWDLAYHPRTLLDICRLREALLRDCEAPVRIALRGLILGILHGPRT HHCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCC RRAPSYLSNQMPRTYATKPDPAVRFWVRRGMRPEEVDVLDVLARRARYSFAALPPPVPGC CCCHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCE ILQADSREPGAIPVVDGGYRWVITSPPYLGMRSYQPDQWLRLWFLGGEPTVRYIHEGQVS EEEECCCCCCEEEEECCCEEEEEECCCCCCCCCCCCCCEEEEEEECCCCEEEEEECCCHH HLQGEYQRDLATVWRNVAARCRPGTRLIIRFGCLPTLPCNPKQVLEETLARSGVPWRIVE HHCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCCEEEEE VTGAGIPPRHRRQAVQFEKTRPAHEEIDLVAVLGE EECCCCCCHHHHHHHHHHHCCCCCCCEEEEEEECC >Mature Secondary Structure MFAGISPSPAELSHYRKPTSFAIDVTPEAATMTTAPHLRLNALCPYFTMFPLDFPTRYLA CCCCCCCCHHHHHHCCCCCCEEEEECCCCCEEECCCCEEEECCCCHHHCCCCCCCHHHHH QARPGEWVLDPFCGRGTTNYAARLHGLPTVGIDSSPVAVAIARAKLVQVTPDELIAEAER HCCCCCEEECCCCCCCCCCHHHHHCCCCCCCCCCCCCEEEEEHHEEEEECHHHHHHHHHH ILAGPEPADVPEGHFWDLAYHPRTLLDICRLREALLRDCEAPVRIALRGLILGILHGPRT HHCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCC RRAPSYLSNQMPRTYATKPDPAVRFWVRRGMRPEEVDVLDVLARRARYSFAALPPPVPGC CCCHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCE ILQADSREPGAIPVVDGGYRWVITSPPYLGMRSYQPDQWLRLWFLGGEPTVRYIHEGQVS EEEECCCCCCEEEEECCCEEEEEECCCCCCCCCCCCCCEEEEEEECCCCEEEEEECCCHH HLQGEYQRDLATVWRNVAARCRPGTRLIIRFGCLPTLPCNPKQVLEETLARSGVPWRIVE HHCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCCEEEEE VTGAGIPPRHRRQAVQFEKTRPAHEEIDLVAVLGE EECCCCCCHHHHHHHHHHHCCCCCCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA