Definition Symbiobacterium thermophilum IAM 14863 chromosome, complete genome.
Accession NC_006177
Length 3,566,135

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The map label for this gene is 51893399

Identifier: 51893399

GI number: 51893399

Start: 2428181

End: 2429368

Strand: Reverse

Name: 51893399

Synonym: STH2261

Alternate gene names: NA

Gene position: 2429368-2428181 (Counterclockwise)

Preceding gene: 51893400

Following gene: 51893398

Centisome position: 68.12

GC content: 67.76

Gene sequence:

>1188_bases
TTGTTTGCAGGTATTTCCCCTTCACCCGCCGAATTGTCGCACTATCGAAAACCAACCTCATTCGCAATCGACGTCACACC
GGAGGCAGCCACGATGACCACAGCCCCGCACCTGCGCCTCAACGCCCTGTGCCCCTACTTCACCATGTTCCCCCTCGACT
TCCCCACCCGGTATCTGGCCCAGGCCCGGCCGGGCGAGTGGGTGCTCGACCCTTTCTGCGGCCGGGGAACCACAAACTAC
GCGGCGCGTCTTCACGGCCTTCCCACCGTCGGCATCGACAGCAGCCCCGTGGCGGTGGCGATTGCCCGGGCCAAGCTGGT
CCAGGTCACCCCCGACGAACTGATCGCCGAGGCGGAACGCATCCTCGCCGGGCCCGAGCCGGCCGACGTGCCGGAGGGCC
ACTTCTGGGACCTCGCCTACCACCCCCGCACCCTGCTCGACATCTGCCGGTTGCGGGAGGCGCTTCTGCGCGACTGCGAA
GCGCCTGTGCGCATCGCCCTGCGGGGGCTTATCCTCGGCATCCTTCACGGTCCCCGAACCAGGCGGGCGCCTTCCTACCT
GTCGAATCAGATGCCCCGTACGTATGCCACCAAGCCCGATCCCGCGGTCCGCTTCTGGGTCCGCAGGGGGATGAGGCCCG
AAGAAGTGGACGTACTGGACGTCCTCGCCCGCCGGGCCCGGTATAGCTTCGCCGCGCTGCCTCCGCCGGTCCCGGGGTGC
ATCCTCCAGGCCGACAGCCGGGAGCCCGGTGCCATCCCCGTCGTAGATGGGGGGTACCGATGGGTGATCACCTCGCCGCC
CTACCTCGGCATGCGCTCCTACCAGCCGGATCAGTGGCTGCGGCTCTGGTTCCTGGGTGGAGAGCCCACCGTACGGTACA
TCCACGAGGGACAGGTGAGCCACTTGCAGGGAGAGTACCAGCGCGACCTTGCAACCGTCTGGCGGAACGTCGCGGCTCGG
TGCCGACCGGGGACCAGGCTGATCATCCGCTTCGGCTGCCTCCCCACCCTGCCTTGCAATCCAAAGCAGGTGCTGGAGGA
GACCCTGGCGAGGTCGGGTGTACCCTGGCGCATCGTGGAGGTTACAGGCGCCGGCATCCCGCCGCGGCACCGGCGCCAGG
CCGTACAGTTTGAGAAAACCCGCCCGGCTCACGAGGAGATCGACCTCGTGGCCGTCTTGGGGGAGTGA

Upstream 100 bases:

>100_bases
GCCCTTTTAACACCACGAATGTCGAGTTGTTCGCGTGAAACTTGAGCTAGGCCTTGCGTGTGTTGACGAGAACGAGTGAG
CCCCATAACCGGGGCTTTCC

Downstream 100 bases:

>100_bases
ATCGATGCTGCACCCAGATGCATTGACGGGCATCAAGGAGCAGATCATCCGGCTCGCGGAGGCCGACCGCGCCCTGTTGG
ACGACCTGCGCCGGGAGGTG

Product: putative DNA modification methylase

Products: NA

Alternate protein names: Methyltransferase DNA; DNA Methylase N-4/N-6 Domain Protein

Number of amino acids: Translated: 395; Mature: 395

Protein sequence:

>395_residues
MFAGISPSPAELSHYRKPTSFAIDVTPEAATMTTAPHLRLNALCPYFTMFPLDFPTRYLAQARPGEWVLDPFCGRGTTNY
AARLHGLPTVGIDSSPVAVAIARAKLVQVTPDELIAEAERILAGPEPADVPEGHFWDLAYHPRTLLDICRLREALLRDCE
APVRIALRGLILGILHGPRTRRAPSYLSNQMPRTYATKPDPAVRFWVRRGMRPEEVDVLDVLARRARYSFAALPPPVPGC
ILQADSREPGAIPVVDGGYRWVITSPPYLGMRSYQPDQWLRLWFLGGEPTVRYIHEGQVSHLQGEYQRDLATVWRNVAAR
CRPGTRLIIRFGCLPTLPCNPKQVLEETLARSGVPWRIVEVTGAGIPPRHRRQAVQFEKTRPAHEEIDLVAVLGE

Sequences:

>Translated_395_residues
MFAGISPSPAELSHYRKPTSFAIDVTPEAATMTTAPHLRLNALCPYFTMFPLDFPTRYLAQARPGEWVLDPFCGRGTTNY
AARLHGLPTVGIDSSPVAVAIARAKLVQVTPDELIAEAERILAGPEPADVPEGHFWDLAYHPRTLLDICRLREALLRDCE
APVRIALRGLILGILHGPRTRRAPSYLSNQMPRTYATKPDPAVRFWVRRGMRPEEVDVLDVLARRARYSFAALPPPVPGC
ILQADSREPGAIPVVDGGYRWVITSPPYLGMRSYQPDQWLRLWFLGGEPTVRYIHEGQVSHLQGEYQRDLATVWRNVAAR
CRPGTRLIIRFGCLPTLPCNPKQVLEETLARSGVPWRIVEVTGAGIPPRHRRQAVQFEKTRPAHEEIDLVAVLGE
>Mature_395_residues
MFAGISPSPAELSHYRKPTSFAIDVTPEAATMTTAPHLRLNALCPYFTMFPLDFPTRYLAQARPGEWVLDPFCGRGTTNY
AARLHGLPTVGIDSSPVAVAIARAKLVQVTPDELIAEAERILAGPEPADVPEGHFWDLAYHPRTLLDICRLREALLRDCE
APVRIALRGLILGILHGPRTRRAPSYLSNQMPRTYATKPDPAVRFWVRRGMRPEEVDVLDVLARRARYSFAALPPPVPGC
ILQADSREPGAIPVVDGGYRWVITSPPYLGMRSYQPDQWLRLWFLGGEPTVRYIHEGQVSHLQGEYQRDLATVWRNVAAR
CRPGTRLIIRFGCLPTLPCNPKQVLEETLARSGVPWRIVEVTGAGIPPRHRRQAVQFEKTRPAHEEIDLVAVLGE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44173; Mature: 44173

Theoretical pI: Translated: 8.87; Mature: 8.87

Prosite motif: PS00093 N4_MTASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFAGISPSPAELSHYRKPTSFAIDVTPEAATMTTAPHLRLNALCPYFTMFPLDFPTRYLA
CCCCCCCCHHHHHHCCCCCCEEEEECCCCCEEECCCCEEEECCCCHHHCCCCCCCHHHHH
QARPGEWVLDPFCGRGTTNYAARLHGLPTVGIDSSPVAVAIARAKLVQVTPDELIAEAER
HCCCCCEEECCCCCCCCCCHHHHHCCCCCCCCCCCCCEEEEEHHEEEEECHHHHHHHHHH
ILAGPEPADVPEGHFWDLAYHPRTLLDICRLREALLRDCEAPVRIALRGLILGILHGPRT
HHCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCC
RRAPSYLSNQMPRTYATKPDPAVRFWVRRGMRPEEVDVLDVLARRARYSFAALPPPVPGC
CCCHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCE
ILQADSREPGAIPVVDGGYRWVITSPPYLGMRSYQPDQWLRLWFLGGEPTVRYIHEGQVS
EEEECCCCCCEEEEECCCEEEEEECCCCCCCCCCCCCCEEEEEEECCCCEEEEEECCCHH
HLQGEYQRDLATVWRNVAARCRPGTRLIIRFGCLPTLPCNPKQVLEETLARSGVPWRIVE
HHCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCCEEEEE
VTGAGIPPRHRRQAVQFEKTRPAHEEIDLVAVLGE
EECCCCCCHHHHHHHHHHHCCCCCCCEEEEEEECC
>Mature Secondary Structure
MFAGISPSPAELSHYRKPTSFAIDVTPEAATMTTAPHLRLNALCPYFTMFPLDFPTRYLA
CCCCCCCCHHHHHHCCCCCCEEEEECCCCCEEECCCCEEEECCCCHHHCCCCCCCHHHHH
QARPGEWVLDPFCGRGTTNYAARLHGLPTVGIDSSPVAVAIARAKLVQVTPDELIAEAER
HCCCCCEEECCCCCCCCCCHHHHHCCCCCCCCCCCCCEEEEEHHEEEEECHHHHHHHHHH
ILAGPEPADVPEGHFWDLAYHPRTLLDICRLREALLRDCEAPVRIALRGLILGILHGPRT
HHCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCC
RRAPSYLSNQMPRTYATKPDPAVRFWVRRGMRPEEVDVLDVLARRARYSFAALPPPVPGC
CCCHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCE
ILQADSREPGAIPVVDGGYRWVITSPPYLGMRSYQPDQWLRLWFLGGEPTVRYIHEGQVS
EEEECCCCCCEEEEECCCEEEEEECCCCCCCCCCCCCCEEEEEEECCCCEEEEEECCCHH
HLQGEYQRDLATVWRNVAARCRPGTRLIIRFGCLPTLPCNPKQVLEETLARSGVPWRIVE
HHCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCCEEEEE
VTGAGIPPRHRRQAVQFEKTRPAHEEIDLVAVLGE
EECCCCCCHHHHHHHHHHHCCCCCCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA