| Definition | Symbiobacterium thermophilum IAM 14863 chromosome, complete genome. |
|---|---|
| Accession | NC_006177 |
| Length | 3,566,135 |
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The map label for this gene is 51893338
Identifier: 51893338
GI number: 51893338
Start: 2361580
End: 2362257
Strand: Reverse
Name: 51893338
Synonym: STH2200
Alternate gene names: NA
Gene position: 2362257-2361580 (Counterclockwise)
Preceding gene: 51893339
Following gene: 51893337
Centisome position: 66.24
GC content: 68.44
Gene sequence:
>678_bases ATGCCAGGCGGTGGCGGCGGCGGTTTCCTGCAGTACATGGACAGCATGGCGATGGCCTTCGGTTTCCTGCTGTTCCTCTG GATTCTGCACCATGCCTGCGGCCGCTGCGTGAAGCTGCACCACGGTGCCTTTCTGAGCGGCTCGATGGTCTCCCTGATCG TGGTCTTTCTGGTGGGCCGCAAGGCGGAGCTGGCCCTGGACCCGTTCGTCGGCGCGATGGCCCTGCTGGCCGGCCTGCTC TACGCTACCGGTTTCCTGGCGCTGATCGACGGGCGGCGGCGGCTCACGCCCTACTTCGTCGCCTACGGCATGGTGGGCAT CCTGGGCTACGCCCTCGCCGCCCACTACGGGAACGTCACCGGCGCGGTGTGGCAGATGCCGCTGCTGTGGATGACGGCCA TCCCCAGCGGCGCCGTCCTGCTGGGAGGTCCGGTCTGGCTCATGTCCCGCAAGGGGGACGGCTCCCACGCCCTGTGGGTG CCGCTGGGCACGATCCTGCTCTACGCGGCCTTCTACTACATGGTCGGGACTACCAACGGGACGATCGCCCTCGGCGACAA CGCCAGCTCGCTGATCAACACCCTACTGGCCGCCGGGTACCTGTGCCACCTGCTGGGGTTTGTCCTGGTGCGCCGGTGGC TGGCAGCGGACCGTCCCGATGCGGCGGAGCCGGCCTAG
Upstream 100 bases:
>100_bases CGCGGCTCGGCCGTCCGCCGGGCGAGTGGCTGGCGGACGGGGTGCGCTGGCGCATCGCTGCCCGGCCGCCTGAAACGGCG GCGAAAGGGGGGCGCAGCTG
Downstream 100 bases:
>100_bases CGTGGATGGGCACACAAGGGAGTGGCCCAGTCGGCCGTTCTGACCGACTGGGCCATTCTTCTGCAGTTACTTGGATTTTC GCGTCCGGCGCGCCCGCGAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 225; Mature: 224
Protein sequence:
>225_residues MPGGGGGGFLQYMDSMAMAFGFLLFLWILHHACGRCVKLHHGAFLSGSMVSLIVVFLVGRKAELALDPFVGAMALLAGLL YATGFLALIDGRRRLTPYFVAYGMVGILGYALAAHYGNVTGAVWQMPLLWMTAIPSGAVLLGGPVWLMSRKGDGSHALWV PLGTILLYAAFYYMVGTTNGTIALGDNASSLINTLLAAGYLCHLLGFVLVRRWLAADRPDAAEPA
Sequences:
>Translated_225_residues MPGGGGGGFLQYMDSMAMAFGFLLFLWILHHACGRCVKLHHGAFLSGSMVSLIVVFLVGRKAELALDPFVGAMALLAGLL YATGFLALIDGRRRLTPYFVAYGMVGILGYALAAHYGNVTGAVWQMPLLWMTAIPSGAVLLGGPVWLMSRKGDGSHALWV PLGTILLYAAFYYMVGTTNGTIALGDNASSLINTLLAAGYLCHLLGFVLVRRWLAADRPDAAEPA >Mature_224_residues PGGGGGGFLQYMDSMAMAFGFLLFLWILHHACGRCVKLHHGAFLSGSMVSLIVVFLVGRKAELALDPFVGAMALLAGLLY ATGFLALIDGRRRLTPYFVAYGMVGILGYALAAHYGNVTGAVWQMPLLWMTAIPSGAVLLGGPVWLMSRKGDGSHALWVP LGTILLYAAFYYMVGTTNGTIALGDNASSLINTLLAAGYLCHLLGFVLVRRWLAADRPDAAEPA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23926; Mature: 23795
Theoretical pI: Translated: 8.77; Mature: 8.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 4.9 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPGGGGGGFLQYMDSMAMAFGFLLFLWILHHACGRCVKLHHGAFLSGSMVSLIVVFLVGR CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCC KAELALDPFVGAMALLAGLLYATGFLALIDGRRRLTPYFVAYGMVGILGYALAAHYGNVT CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCH GAVWQMPLLWMTAIPSGAVLLGGPVWLMSRKGDGSHALWVPLGTILLYAAFYYMVGTTNG HHHHHHHHHHHHHCCCCCEEECCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCC TIALGDNASSLINTLLAAGYLCHLLGFVLVRRWLAADRPDAAEPA EEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure PGGGGGGFLQYMDSMAMAFGFLLFLWILHHACGRCVKLHHGAFLSGSMVSLIVVFLVGR CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCC KAELALDPFVGAMALLAGLLYATGFLALIDGRRRLTPYFVAYGMVGILGYALAAHYGNVT CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCH GAVWQMPLLWMTAIPSGAVLLGGPVWLMSRKGDGSHALWVPLGTILLYAAFYYMVGTTNG HHHHHHHHHHHHHCCCCCEEECCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCC TIALGDNASSLINTLLAAGYLCHLLGFVLVRRWLAADRPDAAEPA EEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA