| Definition | Symbiobacterium thermophilum IAM 14863 chromosome, complete genome. |
|---|---|
| Accession | NC_006177 |
| Length | 3,566,135 |
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The map label for this gene is 51893339
Identifier: 51893339
GI number: 51893339
Start: 2362257
End: 2362742
Strand: Reverse
Name: 51893339
Synonym: STH2201
Alternate gene names: NA
Gene position: 2362742-2362257 (Counterclockwise)
Preceding gene: 51893347
Following gene: 51893338
Centisome position: 66.25
GC content: 69.75
Gene sequence:
>486_bases GTGTGTACGGCGATCGGCCTGATGGCCTTCAGCCTGGTCATCACCTTCATCCGCATGCGGTACTCGGTGATGATCCGGGG CAGCGCGGCGCCGACCAACGTGCGCTTCTCCATCACGATGGTGACCTTCCTTTACATGGTCATCACCCAGCTCCCGGGCA TCCGCGACAAGGTGGACTGGAAGCGGCCCCTGGGCCGGACCGGACCGCACAGTACGCCCGGCGGGTTGGCCCTGATGGTG GCCGGCCTGTTCACGGCGATCTCCCCGTGGGGGGTAGGGTGGACGCACGTCTTCGACGGGGTCAACTACGCGCTGCTCAT GGCGAAGCCGCTGGCCATCACGGGAGGCCTGTTGATGCTGGCCGGCGCCGGGCTCCTGCTCTCGGCGCGGCTCGGCCGTC CGCCGGGCGAGTGGCTGGCGGACGGGGTGCGCTGGCGCATCGCTGCCCGGCCGCCTGAAACGGCGGCGAAAGGGGGGCGC AGCTGA
Upstream 100 bases:
>100_bases GCGCCGGTGGTCAGCCCGTGCACAGCGGTGCCGCCCAGGCCCAGTCGGCTTCGTCTTCGTCATCCTGATTTATGCCATGT TCCGCGGCGAGCGCTGGGCC
Downstream 100 bases:
>100_bases TGCCAGGCGGTGGCGGCGGCGGTTTCCTGCAGTACATGGACAGCATGGCGATGGCCTTCGGTTTCCTGCTGTTCCTCTGG ATTCTGCACCATGCCTGCGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 161; Mature: 161
Protein sequence:
>161_residues MCTAIGLMAFSLVITFIRMRYSVMIRGSAAPTNVRFSITMVTFLYMVITQLPGIRDKVDWKRPLGRTGPHSTPGGLALMV AGLFTAISPWGVGWTHVFDGVNYALLMAKPLAITGGLLMLAGAGLLLSARLGRPPGEWLADGVRWRIAARPPETAAKGGR S
Sequences:
>Translated_161_residues MCTAIGLMAFSLVITFIRMRYSVMIRGSAAPTNVRFSITMVTFLYMVITQLPGIRDKVDWKRPLGRTGPHSTPGGLALMV AGLFTAISPWGVGWTHVFDGVNYALLMAKPLAITGGLLMLAGAGLLLSARLGRPPGEWLADGVRWRIAARPPETAAKGGR S >Mature_161_residues MCTAIGLMAFSLVITFIRMRYSVMIRGSAAPTNVRFSITMVTFLYMVITQLPGIRDKVDWKRPLGRTGPHSTPGGLALMV AGLFTAISPWGVGWTHVFDGVNYALLMAKPLAITGGLLMLAGAGLLLSARLGRPPGEWLADGVRWRIAARPPETAAKGGR S
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17269; Mature: 17269
Theoretical pI: Translated: 11.85; Mature: 11.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 5.6 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 5.6 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCTAIGLMAFSLVITFIRMRYSVMIRGSAAPTNVRFSITMVTFLYMVITQLPGIRDKVDW CCHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCEEEHHHHHHHHHHHHHHCCCCCCCCCC KRPLGRTGPHSTPGGLALMVAGLFTAISPWGVGWTHVFDGVNYALLMAKPLAITGGLLML CCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHCCCCEEHHHHCCHHHHHHHHHH AGAGLLLSARLGRPPGEWLADGVRWRIAARPPETAAKGGRS HCCHHHHHHHCCCCCHHHHHCCCEEEEECCCCHHCCCCCCC >Mature Secondary Structure MCTAIGLMAFSLVITFIRMRYSVMIRGSAAPTNVRFSITMVTFLYMVITQLPGIRDKVDW CCHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCEEEHHHHHHHHHHHHHHCCCCCCCCCC KRPLGRTGPHSTPGGLALMVAGLFTAISPWGVGWTHVFDGVNYALLMAKPLAITGGLLML CCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHCCCCEEHHHHCCHHHHHHHHHH AGAGLLLSARLGRPPGEWLADGVRWRIAARPPETAAKGGRS HCCHHHHHHHCCCCCHHHHHCCCEEEEECCCCHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA