| Definition | Symbiobacterium thermophilum IAM 14863 chromosome, complete genome. |
|---|---|
| Accession | NC_006177 |
| Length | 3,566,135 |
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The map label for this gene is 51893289
Identifier: 51893289
GI number: 51893289
Start: 2295643
End: 2296116
Strand: Reverse
Name: 51893289
Synonym: STH2151
Alternate gene names: NA
Gene position: 2296116-2295643 (Counterclockwise)
Preceding gene: 51893291
Following gene: 51893287
Centisome position: 64.39
GC content: 76.16
Gene sequence:
>474_bases ATGGTGTTCAACGCCGGCGGCGAACTGCTCCTCTGCCGCAGCCGGGACGGGTCAGCGTGGGTGCTGCCCGGCGGCACGCT GGACCCGGGGGAGGACCTGCGTACCGCCGCCGTCCGGGAGGCGGCGGAGGAGGCCGGGGTCGCCGCAGAGGTGGGACCGT TAGCCTACGTGCAGGAGTTCCGTTCCGCGCGCCGGTCGGAGCACGTGGTCGAGATCGTCTTCCGGGCGGCGGCGCCCACC GGCCATCCGTCCGGCGCCGCACTCGCCGGGCGGGCGGCCGAGCCGGCCGGTCCGGCCGACCGGCCCTGGCAGGGCTGGCG CATCCAGGACCCGGACGGGCCGGTGCGGGAGTGCCGCTGGTTCACCCGGGCCGAGGTGGCCGCGCTCTCGGAGCCGGTCT ACCCAGAGGAGCTTCGGGACGCGCTCTGGGAGGACGGCGGCGCCGTCCACCTGGGGCTCATTCACCTGGGCTGA
Upstream 100 bases:
>100_bases GGCGAATGCGGTAAGATGGCGCTGTTGAAATCATCACTGCGAAAGGAAGTGGAATCGGATGGGCGAGCAGGTGACCGGCA TCCGGGTCGTCGCCCGGGTG
Downstream 100 bases:
>100_bases CGGGGCGGCCCTCGCCCGGGGCTCCGGCTTCGGCCTGGAGCCGGGCGACCGTCGGCAGATCGGCGGGGGCCCAGTCGAGC CGGCCCAGTGCGGCGACGGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 157; Mature: 157
Protein sequence:
>157_residues MVFNAGGELLLCRSRDGSAWVLPGGTLDPGEDLRTAAVREAAEEAGVAAEVGPLAYVQEFRSARRSEHVVEIVFRAAAPT GHPSGAALAGRAAEPAGPADRPWQGWRIQDPDGPVRECRWFTRAEVAALSEPVYPEELRDALWEDGGAVHLGLIHLG
Sequences:
>Translated_157_residues MVFNAGGELLLCRSRDGSAWVLPGGTLDPGEDLRTAAVREAAEEAGVAAEVGPLAYVQEFRSARRSEHVVEIVFRAAAPT GHPSGAALAGRAAEPAGPADRPWQGWRIQDPDGPVRECRWFTRAEVAALSEPVYPEELRDALWEDGGAVHLGLIHLG >Mature_157_residues MVFNAGGELLLCRSRDGSAWVLPGGTLDPGEDLRTAAVREAAEEAGVAAEVGPLAYVQEFRSARRSEHVVEIVFRAAAPT GHPSGAALAGRAAEPAGPADRPWQGWRIQDPDGPVRECRWFTRAEVAALSEPVYPEELRDALWEDGGAVHLGLIHLG
Specific function: Unknown
COG id: COG1051
COG function: function code F; ADP-ribose pyrophosphatase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16758; Mature: 16758
Theoretical pI: Translated: 4.62; Mature: 4.62
Prosite motif: PS00893 NUDIX
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVFNAGGELLLCRSRDGSAWVLPGGTLDPGEDLRTAAVREAAEEAGVAAEVGPLAYVQEF CEECCCCCEEEEECCCCCEEEECCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH RSARRSEHVVEIVFRAAAPTGHPSGAALAGRAAEPAGPADRPWQGWRIQDPDGPVRECRW HHHHHHHHHHHHHHHHCCCCCCCCCCEECCCCCCCCCCCCCCCCCCEEECCCCHHHHHHH FTRAEVAALSEPVYPEELRDALWEDGGAVHLGLIHLG HHHHHHHHHCCCCCHHHHHHHHHCCCCEEEEEEEECC >Mature Secondary Structure MVFNAGGELLLCRSRDGSAWVLPGGTLDPGEDLRTAAVREAAEEAGVAAEVGPLAYVQEF CEECCCCCEEEEECCCCCEEEECCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH RSARRSEHVVEIVFRAAAPTGHPSGAALAGRAAEPAGPADRPWQGWRIQDPDGPVRECRW HHHHHHHHHHHHHHHHCCCCCCCCCCEECCCCCCCCCCCCCCCCCCEEECCCCHHHHHHH FTRAEVAALSEPVYPEELRDALWEDGGAVHLGLIHLG HHHHHHHHHCCCCCHHHHHHHHHCCCCEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA