| Definition | Symbiobacterium thermophilum IAM 14863 chromosome, complete genome. |
|---|---|
| Accession | NC_006177 |
| Length | 3,566,135 |
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The map label for this gene is 51893260
Identifier: 51893260
GI number: 51893260
Start: 2265330
End: 2267780
Strand: Reverse
Name: 51893260
Synonym: STH2122
Alternate gene names: NA
Gene position: 2267780-2265330 (Counterclockwise)
Preceding gene: 51893263
Following gene: 51893259
Centisome position: 63.59
GC content: 76.91
Gene sequence:
>2451_bases GTGGACGACCGGGCCGGGATCTTCTCCGCCGCCGAGCTGGAGCGGCTGGAGAACGACCTGACGGGCCGCCGCTTCGGCTT CCGGGTGATCATCCTGGAGGAGGCGTTCGCCGGGGCGGAACCGGTCGATGCCGAGGCCCGGTTCCAGGCGATGGCTGATG AACTGCTGGCCGACGTGCCCCGGGATGCCGTACTGATCACCATCGCGATGGAGGAGGGGCTGGTCGACTTCCGGGTCTGG AGGGACGGCGCCGTGCAGTCCGCCTTCCGGGAGGCGACGGGGCGCGCATTTGAGCGTTCGGTGGAACAGATCATGGACGC CTTTGTGCCGCCGGCGGCGGAGGGCGACATCGCCGGTGCCATCGTGGCGGCCGCGGACCGGATCGAATCGCTGGCCGCGG CGCCCGCGGCCCAGCCCTTGCCCGCCACCGGCGGTTCCGGCGCGGGGCGGCCTTCGCCCGGCCCCCGCGGCTCCGGCGTG GCGCAGCCCGGTGCGGGCGGCGCCGCTGCCCGCACGTCCGCACCGGGCCGCATCGGAGCCGTGCTTGCCGGGCTGGCCGC GCTGATCGCGGCCGTGGTGGAGCTGGCGCTCTTCCTGCAGTACCGTCGGACACACCGCAAGTGCCTGGAGCTCCGGAACA GCTTCGTGTCGGACCTGGTGAAGATGCACGAGCAGGACCTGCCGCTGGCCCGCAACTACGACGGGGAGGAGACCCGCGGC CACGTGACGGCGGCCGCCGCCGCATCCGACCGGGCCTTCGACGCTTACCGGGCCGGCAGTGAGAAGCTGGCCGAAGCCGC CAGGCTGGCACGCCGCTGGCGCTTCGGCGCCGGCACCCGGGCCCTGGACGAGGTGTACAGGGCCTTCCAGCAGGCCGCGG CCGCCAACCGGGAGGCCCAGGAGGCCTACGCGCCCGTCTCGGCGGCGATCCTCGGCTGGGACGGCGCGGTCGGCGAGACC GGGGCCAGGCGGGAGGCGGCCGAGCGGACCCTGGCCGATCTGCAGGACCAGACCGGCTGGGAGTTTCCGGCCCTGCGGGA ACGGATGGACGCGGCCGCCCGGCTGCAGCAGGCGGCCGAGGCCGCCCGGGGCAAGGACCCGGTTCGGGCGCTGCGGATCA TGCGGGAGGCGGGGGAGACCTTCGCGGCGATCGGTGCGGACCTGACCCGGCTCAGCGGGCTGCGGGAGGCCTGCGCGGCC CAGCGGCGGGACGCCGATCAGGCCCGGGCGGAGATCGAGCAGGCCCGGGTGGGGCTCGGATTGCGGTTTGTGGAGGAGGA CCCGGTCCAGGCGCTGGAGCGGGCGTTGCAGGAGCAGGCCCGGGCTGGGGAGCGGATGGCCCGGGGAGAGGTGGACGGCG CCGAGCAAGCGCTGGCCGGCGGTCAGGCGGCGCTGGACGAGGCCCGGGCGATCCTCGCCCGGTACCGGGAGGCCGTGGAA CAGTATCCCGGGAAGCGGCAGGCCCTGGTGGAGGGGGCCGGTTGGCTGGCCGCGCAGCAGGGGCCGGCCCGGAACGTGCT GGATCAGCTGGCCGCCCGCTACGCCCCGGAGGACTGGGCAGATGTCCGCGACCTGCCCGCGGCCTTGGCGGACCTGGAGC GGCGGGCGCAGGCGGACCTGGCGGAGGCGGAGCGTTTTGTGCGGCCGGAGGTGCAGCGGCACCTGCAGGCTTACCGGCTG CTGAACGAACGGCTGGCGGAGCTGGCGGCCCTGCGGGAGCGGGCGGCGCTGCTGACGACCCTTCCCGACCGGCTGGCCGC CGCGGGGGAGGCGGCGCGGGAGAAGCTCACCCGGGCCGAGCGGGAGTGGGCGGCGGCGAGGGAGCTGGTCTCCCGCGAGG GGCTCGCCCTGCCCCGGGACGCCGCCGAGCGGGCCGATCGGATCGAGGTGGCGCTGGACCGTGCGCGCCGCCTGCTGGAA GAGCGGCCTCTGGCCGTGAGCCGGGCGGGCCGGGAGGCCGCCGCCGCGCTGGAGCTGGCGGGCGGCCTGCGCCAGGCCGT CGCGGAACTGGCCCGGAGGGCGGGAGAGGCGCGGGCGCGCCTCCGGCAGGCCCGGGCCGAGGCAACCGCCGCGCTGGTCC ACAGCCGGTTCAACCCGGGCGCGGCCGCGGCCCTGCAGCGGGCTCTGGACGCCGGTGAGCAGGCGATGGCTGCCGGCCGG TACGACCAGGCCGTGGCGGAAGCGGAGTCCGCGCTGCGCAGCGCCCGGGCCTTGGTGGCGGCCTACCAGCGCCACAAGGC CGAGGAGCGGCGCCGGCAGATGGCGATGGCGGCGGCCGCGGCGCAGGCCATGCGGCGCGCCAGCGAACCCCGCGGGCACT TCAGGCCCGGTCCCGGCGGTCGCGGCTCGGGCGGCGGAGGAGGCTTCGGCGGCGGTCCCCGGGGCTCCGGCGGCGGCGGC CGCTTCGGCGGCGGTGGCCGCGGTTCCGGCGGCGGCGGAAGGTGGAAGTAG
Upstream 100 bases:
>100_bases GCGATCTGTGCGTTCCGTTCCCGCCCTGATCCTGTCCCTGCTGGCAGCACTGCTGTGGGTCGCGGCGCCGGCGGTGGCGG CCACGAGTTCCGGCGGCGTG
Downstream 100 bases:
>100_bases CGATCGCGCATCCTACGGGGGAAGCTAAACCGGCTTCCCCTCGTACGCGGTTTGGTGGTAAGGTAATGAAGGTAGATGGA TCGACCGTCCAGGTAAGGAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 816; Mature: 816
Protein sequence:
>816_residues MDDRAGIFSAAELERLENDLTGRRFGFRVIILEEAFAGAEPVDAEARFQAMADELLADVPRDAVLITIAMEEGLVDFRVW RDGAVQSAFREATGRAFERSVEQIMDAFVPPAAEGDIAGAIVAAADRIESLAAAPAAQPLPATGGSGAGRPSPGPRGSGV AQPGAGGAAARTSAPGRIGAVLAGLAALIAAVVELALFLQYRRTHRKCLELRNSFVSDLVKMHEQDLPLARNYDGEETRG HVTAAAAASDRAFDAYRAGSEKLAEAARLARRWRFGAGTRALDEVYRAFQQAAAANREAQEAYAPVSAAILGWDGAVGET GARREAAERTLADLQDQTGWEFPALRERMDAAARLQQAAEAARGKDPVRALRIMREAGETFAAIGADLTRLSGLREACAA QRRDADQARAEIEQARVGLGLRFVEEDPVQALERALQEQARAGERMARGEVDGAEQALAGGQAALDEARAILARYREAVE QYPGKRQALVEGAGWLAAQQGPARNVLDQLAARYAPEDWADVRDLPAALADLERRAQADLAEAERFVRPEVQRHLQAYRL LNERLAELAALRERAALLTTLPDRLAAAGEAAREKLTRAEREWAAARELVSREGLALPRDAAERADRIEVALDRARRLLE ERPLAVSRAGREAAAALELAGGLRQAVAELARRAGEARARLRQARAEATAALVHSRFNPGAAAALQRALDAGEQAMAAGR YDQAVAEAESALRSARALVAAYQRHKAEERRRQMAMAAAAAQAMRRASEPRGHFRPGPGGRGSGGGGGFGGGPRGSGGGG RFGGGGRGSGGGGRWK
Sequences:
>Translated_816_residues MDDRAGIFSAAELERLENDLTGRRFGFRVIILEEAFAGAEPVDAEARFQAMADELLADVPRDAVLITIAMEEGLVDFRVW RDGAVQSAFREATGRAFERSVEQIMDAFVPPAAEGDIAGAIVAAADRIESLAAAPAAQPLPATGGSGAGRPSPGPRGSGV AQPGAGGAAARTSAPGRIGAVLAGLAALIAAVVELALFLQYRRTHRKCLELRNSFVSDLVKMHEQDLPLARNYDGEETRG HVTAAAAASDRAFDAYRAGSEKLAEAARLARRWRFGAGTRALDEVYRAFQQAAAANREAQEAYAPVSAAILGWDGAVGET GARREAAERTLADLQDQTGWEFPALRERMDAAARLQQAAEAARGKDPVRALRIMREAGETFAAIGADLTRLSGLREACAA QRRDADQARAEIEQARVGLGLRFVEEDPVQALERALQEQARAGERMARGEVDGAEQALAGGQAALDEARAILARYREAVE QYPGKRQALVEGAGWLAAQQGPARNVLDQLAARYAPEDWADVRDLPAALADLERRAQADLAEAERFVRPEVQRHLQAYRL LNERLAELAALRERAALLTTLPDRLAAAGEAAREKLTRAEREWAAARELVSREGLALPRDAAERADRIEVALDRARRLLE ERPLAVSRAGREAAAALELAGGLRQAVAELARRAGEARARLRQARAEATAALVHSRFNPGAAAALQRALDAGEQAMAAGR YDQAVAEAESALRSARALVAAYQRHKAEERRRQMAMAAAAAQAMRRASEPRGHFRPGPGGRGSGGGGGFGGGPRGSGGGG RFGGGGRGSGGGGRWK >Mature_816_residues MDDRAGIFSAAELERLENDLTGRRFGFRVIILEEAFAGAEPVDAEARFQAMADELLADVPRDAVLITIAMEEGLVDFRVW RDGAVQSAFREATGRAFERSVEQIMDAFVPPAAEGDIAGAIVAAADRIESLAAAPAAQPLPATGGSGAGRPSPGPRGSGV AQPGAGGAAARTSAPGRIGAVLAGLAALIAAVVELALFLQYRRTHRKCLELRNSFVSDLVKMHEQDLPLARNYDGEETRG HVTAAAAASDRAFDAYRAGSEKLAEAARLARRWRFGAGTRALDEVYRAFQQAAAANREAQEAYAPVSAAILGWDGAVGET GARREAAERTLADLQDQTGWEFPALRERMDAAARLQQAAEAARGKDPVRALRIMREAGETFAAIGADLTRLSGLREACAA QRRDADQARAEIEQARVGLGLRFVEEDPVQALERALQEQARAGERMARGEVDGAEQALAGGQAALDEARAILARYREAVE QYPGKRQALVEGAGWLAAQQGPARNVLDQLAARYAPEDWADVRDLPAALADLERRAQADLAEAERFVRPEVQRHLQAYRL LNERLAELAALRERAALLTTLPDRLAAAGEAAREKLTRAEREWAAARELVSREGLALPRDAAERADRIEVALDRARRLLE ERPLAVSRAGREAAAALELAGGLRQAVAELARRAGEARARLRQARAEATAALVHSRFNPGAAAALQRALDAGEQAMAAGR YDQAVAEAESALRSARALVAAYQRHKAEERRRQMAMAAAAAQAMRRASEPRGHFRPGPGGRGSGGGGGFGGGPRGSGGGG RFGGGGRGSGGGGRWK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 86798; Mature: 86798
Theoretical pI: Translated: 7.70; Mature: 7.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDDRAGIFSAAELERLENDLTGRRFGFRVIILEEAFAGAEPVDAEARFQAMADELLADVP CCCCCCHHHHHHHHHHHHHHCCCHHCEEEEEEEHHHCCCCCCCHHHHHHHHHHHHHHHCC RDAVLITIAMEEGLVDFRVWRDGAVQSAFREATGRAFERSVEQIMDAFVPPAAEGDIAGA CCEEEEEEEHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHH IVAAADRIESLAAAPAAQPLPATGGSGAGRPSPGPRGSGVAQPGAGGAAARTSAPGRIGA HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH VLAGLAALIAAVVELALFLQYRRTHRKCLELRNSFVSDLVKMHEQDLPLARNYDGEETRG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC HVTAAAAASDRAFDAYRAGSEKLAEAARLARRWRFGAGTRALDEVYRAFQQAAAANREAQ CCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCHHHH EAYAPVSAAILGWDGAVGETGARREAAERTLADLQDQTGWEFPALRERMDAAARLQQAAE HHHCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH AARGKDPVRALRIMREAGETFAAIGADLTRLSGLREACAAQRRDADQARAEIEQARVGLG HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCC LRFVEEDPVQALERALQEQARAGERMARGEVDGAEQALAGGQAALDEARAILARYREAVE CEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHH QYPGKRQALVEGAGWLAAQQGPARNVLDQLAARYAPEDWADVRDLPAALADLERRAQADL HCCCHHHHHHHCCCHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH AEAERFVRPEVQRHLQAYRLLNERLAELAALRERAALLTTLPDRLAAAGEAAREKLTRAE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH REWAAARELVSREGLALPRDAAERADRIEVALDRARRLLEERPLAVSRAGREAAAALELA HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCHHHHHHHHHH GGLRQAVAELARRAGEARARLRQARAEATAALVHSRFNPGAAAALQRALDAGEQAMAAGR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCH YDQAVAEAESALRSARALVAAYQRHKAEERRRQMAMAAAAAQAMRRASEPRGHFRPGPGG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC RGSGGGGGFGGGPRGSGGGGRFGGGGRGSGGGGRWK CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MDDRAGIFSAAELERLENDLTGRRFGFRVIILEEAFAGAEPVDAEARFQAMADELLADVP CCCCCCHHHHHHHHHHHHHHCCCHHCEEEEEEEHHHCCCCCCCHHHHHHHHHHHHHHHCC RDAVLITIAMEEGLVDFRVWRDGAVQSAFREATGRAFERSVEQIMDAFVPPAAEGDIAGA CCEEEEEEEHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHH IVAAADRIESLAAAPAAQPLPATGGSGAGRPSPGPRGSGVAQPGAGGAAARTSAPGRIGA HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH VLAGLAALIAAVVELALFLQYRRTHRKCLELRNSFVSDLVKMHEQDLPLARNYDGEETRG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC HVTAAAAASDRAFDAYRAGSEKLAEAARLARRWRFGAGTRALDEVYRAFQQAAAANREAQ CCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCHHHH EAYAPVSAAILGWDGAVGETGARREAAERTLADLQDQTGWEFPALRERMDAAARLQQAAE HHHCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH AARGKDPVRALRIMREAGETFAAIGADLTRLSGLREACAAQRRDADQARAEIEQARVGLG HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCC LRFVEEDPVQALERALQEQARAGERMARGEVDGAEQALAGGQAALDEARAILARYREAVE CEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHH QYPGKRQALVEGAGWLAAQQGPARNVLDQLAARYAPEDWADVRDLPAALADLERRAQADL HCCCHHHHHHHCCCHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH AEAERFVRPEVQRHLQAYRLLNERLAELAALRERAALLTTLPDRLAAAGEAAREKLTRAE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH REWAAARELVSREGLALPRDAAERADRIEVALDRARRLLEERPLAVSRAGREAAAALELA HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCHHHHHHHHHH GGLRQAVAELARRAGEARARLRQARAEATAALVHSRFNPGAAAALQRALDAGEQAMAAGR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCH YDQAVAEAESALRSARALVAAYQRHKAEERRRQMAMAAAAAQAMRRASEPRGHFRPGPGG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC RGSGGGGGFGGGPRGSGGGGRFGGGGRGSGGGGRWK CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA