Definition Symbiobacterium thermophilum IAM 14863 chromosome, complete genome.
Accession NC_006177
Length 3,566,135

Click here to switch to the map view.

The map label for this gene is ccpA [H]

Identifier: 51893185

GI number: 51893185

Start: 2184919

End: 2185869

Strand: Reverse

Name: ccpA [H]

Synonym: STH2047

Alternate gene names: 51893185

Gene position: 2185869-2184919 (Counterclockwise)

Preceding gene: 51893191

Following gene: 51893171

Centisome position: 61.3

GC content: 66.98

Gene sequence:

>951_bases
ATGGCCGTTGGCTGCAGCTCGAGCTCCACCAAGTCGACGGGTCAGCTTACCGAAGTTCGCCAAGGCAGCTTCGCCACCAT
CGTCGCAGCGCCCGAGAACCCGGACAACCCCACCACCCCCGAGAAGGTCGAGCTGGGCAAGCTGCTCTTCTTCGATCCCC
GGCTCAGCAGCAGCGGCGTGATCTCCTGCGCGACCTGTCACAACCTCGGGCTGGCCGGCACGGACCGTCTCCCGACCTCG
ATCGGTCACGGCTTCCAGAGGACCCCGCGCAACGCCCCCACGGTGCTGAACGCGGCGTTCTTCCAGAACCAGTTCTGGGA
CGGCCGCGCGCAGGGCCTGGAGGAGCAGGCGAAGGGCCCGATCCAGGCCGAGGCCGAGATGAACATGCCCGCCGACATGG
CCGTGGAGCGGATCAAGTCGATCAAGGGCTACCACGAATACTTCGAGAAGGCCTTCCCCGGCGAGGAGGATCCCATCACC
TTCGACAACATCGTGAAGGCGATCGCCGCCTTCGAGCGCACCCTGATCACGCCCAACGACGCGCTGGACCGCTACCTGCG
CGGCGACAAGAATGCGCTCTCGCCGCAGGCCATCCGCGGCATGGAGACCTTTGAGCGCATCGGCTGCACCTCCTGCCACG
CCGGCCCGGCGCTCTCCAGCGGTGCGATGATGAAGTTCGACTGGGGCAGCGACCCCGGCAAGGCGAGCTGGACCAACAAC
CCGCAGGACGAGAAGTTCTTCCGGGTGCAGACCCTGCGCAACGTCTCGCTGACCGGCCCGTACTTCCACGACGGTTCGGT
GGAGACCCTGGAGGAGGCCGTGACCATCATGGCCCGGGTGCAGCTCGGCTACGAGCTCAGCGACCAGGAGCGGGACGACA
TCGTCGCCTTCCTGCGGTCCCTGGTGGGCGAGATGCCCCAGGTCGAGGTGCCGGTGCTGCCGGCCGAATAG

Upstream 100 bases:

>100_bases
AGATTACAAGCGGCGAACGCCGCGGAATCAGGTTGAGGAGGATGCAGTCATGTTTCGACGGACGCGCATGATGGCGCTGG
TCGGAGCTCTCGTCCTTGTG

Downstream 100 bases:

>100_bases
ACACCGTCACAAACCCCCTGGCCAGCTCAGGCCAGGGGGTTTTCCGCGCCCCGGGAGGGGCGCAGCGACGCGTTCAGGAG
CAGCGTGTGTGCGACATCGC

Product: cytochrome C peroxidase

Products: NA

Alternate protein names: CCP; Cytochrome c peroxidase [H]

Number of amino acids: Translated: 316; Mature: 315

Protein sequence:

>316_residues
MAVGCSSSSTKSTGQLTEVRQGSFATIVAAPENPDNPTTPEKVELGKLLFFDPRLSSSGVISCATCHNLGLAGTDRLPTS
IGHGFQRTPRNAPTVLNAAFFQNQFWDGRAQGLEEQAKGPIQAEAEMNMPADMAVERIKSIKGYHEYFEKAFPGEEDPIT
FDNIVKAIAAFERTLITPNDALDRYLRGDKNALSPQAIRGMETFERIGCTSCHAGPALSSGAMMKFDWGSDPGKASWTNN
PQDEKFFRVQTLRNVSLTGPYFHDGSVETLEEAVTIMARVQLGYELSDQERDDIVAFLRSLVGEMPQVEVPVLPAE

Sequences:

>Translated_316_residues
MAVGCSSSSTKSTGQLTEVRQGSFATIVAAPENPDNPTTPEKVELGKLLFFDPRLSSSGVISCATCHNLGLAGTDRLPTS
IGHGFQRTPRNAPTVLNAAFFQNQFWDGRAQGLEEQAKGPIQAEAEMNMPADMAVERIKSIKGYHEYFEKAFPGEEDPIT
FDNIVKAIAAFERTLITPNDALDRYLRGDKNALSPQAIRGMETFERIGCTSCHAGPALSSGAMMKFDWGSDPGKASWTNN
PQDEKFFRVQTLRNVSLTGPYFHDGSVETLEEAVTIMARVQLGYELSDQERDDIVAFLRSLVGEMPQVEVPVLPAE
>Mature_315_residues
AVGCSSSSTKSTGQLTEVRQGSFATIVAAPENPDNPTTPEKVELGKLLFFDPRLSSSGVISCATCHNLGLAGTDRLPTSI
GHGFQRTPRNAPTVLNAAFFQNQFWDGRAQGLEEQAKGPIQAEAEMNMPADMAVERIKSIKGYHEYFEKAFPGEEDPITF
DNIVKAIAAFERTLITPNDALDRYLRGDKNALSPQAIRGMETFERIGCTSCHAGPALSSGAMMKFDWGSDPGKASWTNNP
QDEKFFRVQTLRNVSLTGPYFHDGSVETLEEAVTIMARVQLGYELSDQERDDIVAFLRSLVGEMPQVEVPVLPAE

Specific function: Catalyzes the peroxidative oxidation of azurin and cytochrome c551. Likely to provide protection against toxic peroxides [H]

COG id: COG1858

COG function: function code P; Cytochrome c peroxidase

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789935, Length=308, Percent_Identity=40.2597402597403, Blast_Score=206, Evalue=2e-54,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009056
- InterPro:   IPR003088
- InterPro:   IPR004852 [H]

Pfam domain/function: PF03150 CCP_MauG; PF00034 Cytochrom_C [H]

EC number: =1.11.1.5 [H]

Molecular weight: Translated: 34540; Mature: 34409

Theoretical pI: Translated: 4.66; Mature: 4.66

Prosite motif: PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVGCSSSSTKSTGQLTEVRQGSFATIVAAPENPDNPTTPEKVELGKLLFFDPRLSSSGV
CCCCCCCCCCCCCCHHHHHCCCCEEEEEECCCCCCCCCCCCHHHHCEEEEECCCCCCCCC
ISCATCHNLGLAGTDRLPTSIGHGFQRTPRNAPTVLNAAFFQNQFWDGRAQGLEEQAKGP
EEEEHHHCCCCCCCCCCCHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHCCHHHHCCC
IQAEAEMNMPADMAVERIKSIKGYHEYFEKAFPGEEDPITFDNIVKAIAAFERTLITPND
CEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCH
ALDRYLRGDKNALSPQAIRGMETFERIGCTSCHAGPALSSGAMMKFDWGSDPGKASWTNN
HHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCC
PQDEKFFRVQTLRNVSLTGPYFHDGSVETLEEAVTIMARVQLGYELSDQERDDIVAFLRS
CCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH
LVGEMPQVEVPVLPAE
HHCCCCCCCCCCCCCC
>Mature Secondary Structure 
AVGCSSSSTKSTGQLTEVRQGSFATIVAAPENPDNPTTPEKVELGKLLFFDPRLSSSGV
CCCCCCCCCCCCCHHHHHCCCCEEEEEECCCCCCCCCCCCHHHHCEEEEECCCCCCCCC
ISCATCHNLGLAGTDRLPTSIGHGFQRTPRNAPTVLNAAFFQNQFWDGRAQGLEEQAKGP
EEEEHHHCCCCCCCCCCCHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHCCHHHHCCC
IQAEAEMNMPADMAVERIKSIKGYHEYFEKAFPGEEDPITFDNIVKAIAAFERTLITPND
CEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCH
ALDRYLRGDKNALSPQAIRGMETFERIGCTSCHAGPALSSGAMMKFDWGSDPGKASWTNN
HHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCC
PQDEKFFRVQTLRNVSLTGPYFHDGSVETLEEAVTIMARVQLGYELSDQERDDIVAFLRS
CCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH
LVGEMPQVEVPVLPAE
HHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7781769; 10984043; 8543038; 2546794; 3030432; 1657179; 8591033 [H]