Definition Symbiobacterium thermophilum IAM 14863 chromosome, complete genome.
Accession NC_006177
Length 3,566,135

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The map label for this gene is 51893171

Identifier: 51893171

GI number: 51893171

Start: 2173551

End: 2174279

Strand: Reverse

Name: 51893171

Synonym: STH2033

Alternate gene names: NA

Gene position: 2174279-2173551 (Counterclockwise)

Preceding gene: 51893185

Following gene: 51893170

Centisome position: 60.97

GC content: 70.23

Gene sequence:

>729_bases
TTGGAACGGGATCCGCAGAAGATCAGTGCGGTTCTTGCCGATCCAACCCGGTACAGCATCTATCAGTATGTGCTGGTGGC
GCCCGACCCGGTGTCTGCGGCTGAGGTGGCCCGGCGGTTCGACCTTCATCCCAACGTCGCGCGCATGCACCTGAACCGGC
TGACGGAGGTGGGGTTGCTCCGGCAGCGGACCGAGAAGACCGGCAGGGGTGGGCGGCCCAGTTACGTATACGAGCCATCC
GGCAGCGCGGTGTCGCTGACGACGGTGCCGCCCCGCGACTTCCAGCTGCTGGCCGACCTGCTGGTGCAGTCGCTGGCCCT
GCTCGGTGAGGGCGGAAAGGAGGCCGTGGAGCAGATCGGCCACTCCTTCGGGCGGCGGCTGGGACAGGAGGCCCTCTCCA
AGCTGGCGCCGTCGCTGAACGCGGCCAACGGCGCCACGGGGCCGCAGGCGCTGCTGGAGGCGTGCGCGATGGCGCTCAGC
CGGCTCGGCGTCTCGGCCCGGGTGATCAAGGGGCCCGGCGACCGGCCCAGCCTCGTGCTGAAGTCGTGCGGCTTCCACGA
GGTGGCCTCCGCCCATCCCGAGCAGGTGTGCCACCTCTGCAAGGCCATGGTGGAGGGCGTGGCCCAGACCTGCGCCGAGG
TCCCGCCCGCCGTGACCCAGGCCGGCACCGTACCCCGGGGGGATCTGGAGTGCGTCTATGAGGTAGACGGGCTGATCCGC
CTGGAGTAG

Upstream 100 bases:

>100_bases
TTTCCGAGATTTTCAACCAAACTGTGTCGTAAGTATAGACGTGCCTCATCGCCCGGGCGTGACGGACGCCCCGGGCAGCC
CGGATGGGGGAGGGGAGAAC

Downstream 100 bases:

>100_bases
CGCTCACGGCCGAGCGCCCGCAGGCCGGCGTGGGAGCCGACCTGCGGGCGACGGCGCGCACAGGGGGGAGGAGCGGGTGA
GGAGACGGTTGGACGGGCGG

Product: hypothetical protein

Products: NA

Alternate protein names: ArsR Family Transcriptional Regulator

Number of amino acids: Translated: 242; Mature: 242

Protein sequence:

>242_residues
MERDPQKISAVLADPTRYSIYQYVLVAPDPVSAAEVARRFDLHPNVARMHLNRLTEVGLLRQRTEKTGRGGRPSYVYEPS
GSAVSLTTVPPRDFQLLADLLVQSLALLGEGGKEAVEQIGHSFGRRLGQEALSKLAPSLNAANGATGPQALLEACAMALS
RLGVSARVIKGPGDRPSLVLKSCGFHEVASAHPEQVCHLCKAMVEGVAQTCAEVPPAVTQAGTVPRGDLECVYEVDGLIR
LE

Sequences:

>Translated_242_residues
MERDPQKISAVLADPTRYSIYQYVLVAPDPVSAAEVARRFDLHPNVARMHLNRLTEVGLLRQRTEKTGRGGRPSYVYEPS
GSAVSLTTVPPRDFQLLADLLVQSLALLGEGGKEAVEQIGHSFGRRLGQEALSKLAPSLNAANGATGPQALLEACAMALS
RLGVSARVIKGPGDRPSLVLKSCGFHEVASAHPEQVCHLCKAMVEGVAQTCAEVPPAVTQAGTVPRGDLECVYEVDGLIR
LE
>Mature_242_residues
MERDPQKISAVLADPTRYSIYQYVLVAPDPVSAAEVARRFDLHPNVARMHLNRLTEVGLLRQRTEKTGRGGRPSYVYEPS
GSAVSLTTVPPRDFQLLADLLVQSLALLGEGGKEAVEQIGHSFGRRLGQEALSKLAPSLNAANGATGPQALLEACAMALS
RLGVSARVIKGPGDRPSLVLKSCGFHEVASAHPEQVCHLCKAMVEGVAQTCAEVPPAVTQAGTVPRGDLECVYEVDGLIR
LE

Specific function: Unknown

COG id: COG2345

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25828; Mature: 25828

Theoretical pI: Translated: 7.09; Mature: 7.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MERDPQKISAVLADPTRYSIYQYVLVAPDPVSAAEVARRFDLHPNVARMHLNRLTEVGLL
CCCCHHHHHHHHCCCCHHHHEEEEEECCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHH
RQRTEKTGRGGRPSYVYEPSGSAVSLTTVPPRDFQLLADLLVQSLALLGEGGKEAVEQIG
HHHHHHCCCCCCCCEEECCCCCEEEEEECCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
HSFGRRLGQEALSKLAPSLNAANGATGPQALLEACAMALSRLGVSARVIKGPGDRPSLVL
HHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHH
KSCGFHEVASAHPEQVCHLCKAMVEGVAQTCAEVPPAVTQAGTVPRGDLECVYEVDGLIR
HHCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCEEEECCCEEE
LE
CC
>Mature Secondary Structure
MERDPQKISAVLADPTRYSIYQYVLVAPDPVSAAEVARRFDLHPNVARMHLNRLTEVGLL
CCCCHHHHHHHHCCCCHHHHEEEEEECCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHH
RQRTEKTGRGGRPSYVYEPSGSAVSLTTVPPRDFQLLADLLVQSLALLGEGGKEAVEQIG
HHHHHHCCCCCCCCEEECCCCCEEEEEECCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
HSFGRRLGQEALSKLAPSLNAANGATGPQALLEACAMALSRLGVSARVIKGPGDRPSLVL
HHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHH
KSCGFHEVASAHPEQVCHLCKAMVEGVAQTCAEVPPAVTQAGTVPRGDLECVYEVDGLIR
HHCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCEEEECCCEEE
LE
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA