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The map label for this gene is 51893133

Identifier: 51893133

GI number: 51893133

Start: 2135684

End: 2136376

Strand: Reverse

Name: 51893133

Synonym: STH1995

Alternate gene names: NA

Gene position: 2136376-2135684 (Counterclockwise)

Preceding gene: 51893136

Following gene: 51893132

Centisome position: 59.91

GC content: 69.99

Gene sequence:

>693_bases
TTGGTCCTGCCACTGCGTGACAGTCCAGCGGTACGCAGACGCCCGTGGGTCAACTGGGCGCTCATCGCCCTCAACTTCGC
CGTCTTCCTCCTGGAGATGGCCAGCCCGGTGACGGGCGAGTGGCTCATCGGGAACTTCGCCCTCCGGCCGACCGCGCTGC
TCAGCCCGGACGCCTGGGCGGCGAGCGGGGGATGGCCGCTGGTGACCCTCTTCACCTCGGCCTTCCTGCACGGTTCCTGG
GGCCACGTGCTGGGCAACATGCTCTACCTCTGGATCTTCGGGGACAACCTGGAGGACCGGCTGGGCCACGGGCGGTACCT
GCTGTTCTACGTGCTGTGCATCGCCCTGGCCAACCTGGCGCACGCGGTGGCCAACCCGACCTCGCCGATCCCGACGATCG
GCGCCTCGGGCGCCGTGGCCGGGGTGCTGGGAGGATACATCCTCAGCTTCCCGCGGGCCCGGGTGCTGGCCCTCGTGCCC
ATCGGCGCCTTCGTCCCGGCCGTCCGGGTGCCGGCCTGGGTGTTCCTCGGGCTCTGGTTCTTCGTGCAGCTGGCCAGCGG
CCTGGCGCCGATCTGGCTGCATGACCTCACCCAGACGGTCGCCTTCTGGGCGCACATCAACGGCTTCCTGAGCGGCGTGG
CCCTGGCGCAGTTGCTCTCGCCGCGGCAGGAGAAGGCGGAAGAACCGAGGTGA

Upstream 100 bases:

>100_bases
ACCTCCGGTTTACTCGCTGCCCATAGAGTGATTCAGCGTCGGGGGAGATATGCTATTGCAAAGCCGGCGCCGGCGCGGTA
CACTCCGGGGGGAGTTGGCA

Downstream 100 bases:

>100_bases
GCATGGAATGCGCATCGGCGGGCTTGACGTCGGCGAGAAGACCATCGGCGTGGCGCTGTCCGACGAGCTGGGTCTTACGG
CCCAGGCGCTGGAGGTCATC

Product: hypothetical protein

Products: NA

Alternate protein names: Integral Membrane Protein; Peptidase; Rhomboid-Like Protein; S54 Family Peptidase; Peptidase Protein; Rhomboid Family Transmembrane Protein; LOW QUALITY PROTEIN Integral Membrane Protein; Transmembrane Rhomboid Family Protein; Subfamily; Rhomboid Serine Protease; Membrane Associated Serine Protease; Rhomboid Family Membrane Protein; Integral Membrane Rhomboid Family Protein; Regulatory Proteins IclR

Number of amino acids: Translated: 230; Mature: 230

Protein sequence:

>230_residues
MVLPLRDSPAVRRRPWVNWALIALNFAVFLLEMASPVTGEWLIGNFALRPTALLSPDAWAASGGWPLVTLFTSAFLHGSW
GHVLGNMLYLWIFGDNLEDRLGHGRYLLFYVLCIALANLAHAVANPTSPIPTIGASGAVAGVLGGYILSFPRARVLALVP
IGAFVPAVRVPAWVFLGLWFFVQLASGLAPIWLHDLTQTVAFWAHINGFLSGVALAQLLSPRQEKAEEPR

Sequences:

>Translated_230_residues
MVLPLRDSPAVRRRPWVNWALIALNFAVFLLEMASPVTGEWLIGNFALRPTALLSPDAWAASGGWPLVTLFTSAFLHGSW
GHVLGNMLYLWIFGDNLEDRLGHGRYLLFYVLCIALANLAHAVANPTSPIPTIGASGAVAGVLGGYILSFPRARVLALVP
IGAFVPAVRVPAWVFLGLWFFVQLASGLAPIWLHDLTQTVAFWAHINGFLSGVALAQLLSPRQEKAEEPR
>Mature_230_residues
MVLPLRDSPAVRRRPWVNWALIALNFAVFLLEMASPVTGEWLIGNFALRPTALLSPDAWAASGGWPLVTLFTSAFLHGSW
GHVLGNMLYLWIFGDNLEDRLGHGRYLLFYVLCIALANLAHAVANPTSPIPTIGASGAVAGVLGGYILSFPRARVLALVP
IGAFVPAVRVPAWVFLGLWFFVQLASGLAPIWLHDLTQTVAFWAHINGFLSGVALAQLLSPRQEKAEEPR

Specific function: Unknown

COG id: COG0705

COG function: function code R; Uncharacterized membrane protein (homolog of Drosophila rhomboid)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25028; Mature: 25028

Theoretical pI: Translated: 9.14; Mature: 9.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVLPLRDSPAVRRRPWVNWALIALNFAVFLLEMASPVTGEWLIGNFALRPTALLSPDAWA
CCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEECEEECCCCEECCCCCC
ASGGWPLVTLFTSAFLHGSWGHVLGNMLYLWIFGDNLEDRLGHGRYLLFYVLCIALANLA
CCCCCHHHHHHHHHHHCCCHHHHHHHHEEEEEECCCHHHHHCCCHHHHHHHHHHHHHHHH
HAVANPTSPIPTIGASGAVAGVLGGYILSFPRARVLALVPIGAFVPAVRVPAWVFLGLWF
HHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
FVQLASGLAPIWLHDLTQTVAFWAHINGFLSGVALAQLLSPRQEKAEEPR
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCC
>Mature Secondary Structure
MVLPLRDSPAVRRRPWVNWALIALNFAVFLLEMASPVTGEWLIGNFALRPTALLSPDAWA
CCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEECEEECCCCEECCCCCC
ASGGWPLVTLFTSAFLHGSWGHVLGNMLYLWIFGDNLEDRLGHGRYLLFYVLCIALANLA
CCCCCHHHHHHHHHHHCCCHHHHHHHHEEEEEECCCHHHHHCCCHHHHHHHHHHHHHHHH
HAVANPTSPIPTIGASGAVAGVLGGYILSFPRARVLALVPIGAFVPAVRVPAWVFLGLWF
HHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
FVQLASGLAPIWLHDLTQTVAFWAHINGFLSGVALAQLLSPRQEKAEEPR
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA