Definition Symbiobacterium thermophilum IAM 14863 chromosome, complete genome.
Accession NC_006177
Length 3,566,135

Click here to switch to the map view.

The map label for this gene is 51893097

Identifier: 51893097

GI number: 51893097

Start: 2098686

End: 2099588

Strand: Reverse

Name: 51893097

Synonym: STH1959

Alternate gene names: NA

Gene position: 2099588-2098686 (Counterclockwise)

Preceding gene: 51893098

Following gene: 51893096

Centisome position: 58.88

GC content: 73.42

Gene sequence:

>903_bases
GTGAGCCTGTGGTCGCTGCTGCGGACGGAGGGCCGCCTGGTGTGGAAGGGCCGCTGGGTGGCCCTTCTCACGCTCGCGCT
CGCCGCGGCGAGCGTGTGGGGCGGCCCCTTCGGCACCTATCGCTACGCGGTGCGCAGCGCGGAGCGCATCCACGCGCTGC
GGGCGGCCTACGAGGCCGAGTTCGCCGAGCTCATCCTGGACGACCTCGTCGCCGAGCTGCAGGGGACGCTTGCCCTGCTC
CATCCCGCCATGGGGCCCAACTACCTGCTGGCCATCCTGGCGGTGCTGGGGACGATGGTGCTGCCCATCTGGGGCGCCCA
ACTGGTCGGCAACGAGTTCCGGCACCGCACGGCCAAGGCGCGGGCGGCGCACGTCGGCTGGGGGGCGATGGTGGCGGCGA
AGGTCGCCTGGCTGCTCCTGCTCAGCGCCGGGCTGGCCGCGCTCTTCGCCGGGATCGGCGCCCTGAGCGGCCAGGTAACT
TGGCGCGCAGCGCAGGACGCCCTCCTGCTCGCCGGCGAGGTGACCCCGCCGCCGCTGAAGGCGCCCCTGTTTGCGCAGGC
GCTGACGGCGGCCCTGGGCCTCTTCTTCTTCGGCCTGGTCGGCCTGCTGGCCGCCCTGGTCACGCGCAGCGCCCTTGCCG
GCGCGCTCGTCGGCCTCGCGCTGCCTTACGTGGAGGCGTTCGTCATCGGTACGCCCGAGTGGGGGTGGCTGCTTCCCCGC
ATCGCCTACGGCAACCTGATGGTGGACCACTTCGTCTACCTGCCCGGGGGCATGGTGGGGGAGCCCCTGGCCCTGGTTCC
GGCGCCGGCGCCCTGGGTTTCCTGGGCCGTCGTCGCCGGCTGGACCGTCCTGGCATGCCTCGCCGCCCTGCGCCTGGGTC
AACGGCAGCAGATCCTGAGCTGA

Upstream 100 bases:

>100_bases
AGATCCCCCTCCAGTCGCTGGAGCTTAGGGCCGCCACGCTGGAGGAAAGCTTCCGCCGGCTGGGGTTGTATGACGGGGAG
GAGCAGCAGGAGGTGGCGCC

Downstream 100 bases:

>100_bases
GTCACCGGTCAAGCCGGTGCCGCATACCCTATCCCGCACAGGAGGGGAGGGGTAGCGGTGCTTGCCATGTTGGGACCCTT
GGCCGAAGCCATCGTGCGCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 300; Mature: 299

Protein sequence:

>300_residues
MSLWSLLRTEGRLVWKGRWVALLTLALAAASVWGGPFGTYRYAVRSAERIHALRAAYEAEFAELILDDLVAELQGTLALL
HPAMGPNYLLAILAVLGTMVLPIWGAQLVGNEFRHRTAKARAAHVGWGAMVAAKVAWLLLLSAGLAALFAGIGALSGQVT
WRAAQDALLLAGEVTPPPLKAPLFAQALTAALGLFFFGLVGLLAALVTRSALAGALVGLALPYVEAFVIGTPEWGWLLPR
IAYGNLMVDHFVYLPGGMVGEPLALVPAPAPWVSWAVVAGWTVLACLAALRLGQRQQILS

Sequences:

>Translated_300_residues
MSLWSLLRTEGRLVWKGRWVALLTLALAAASVWGGPFGTYRYAVRSAERIHALRAAYEAEFAELILDDLVAELQGTLALL
HPAMGPNYLLAILAVLGTMVLPIWGAQLVGNEFRHRTAKARAAHVGWGAMVAAKVAWLLLLSAGLAALFAGIGALSGQVT
WRAAQDALLLAGEVTPPPLKAPLFAQALTAALGLFFFGLVGLLAALVTRSALAGALVGLALPYVEAFVIGTPEWGWLLPR
IAYGNLMVDHFVYLPGGMVGEPLALVPAPAPWVSWAVVAGWTVLACLAALRLGQRQQILS
>Mature_299_residues
SLWSLLRTEGRLVWKGRWVALLTLALAAASVWGGPFGTYRYAVRSAERIHALRAAYEAEFAELILDDLVAELQGTLALLH
PAMGPNYLLAILAVLGTMVLPIWGAQLVGNEFRHRTAKARAAHVGWGAMVAAKVAWLLLLSAGLAALFAGIGALSGQVTW
RAAQDALLLAGEVTPPPLKAPLFAQALTAALGLFFFGLVGLLAALVTRSALAGALVGLALPYVEAFVIGTPEWGWLLPRI
AYGNLMVDHFVYLPGGMVGEPLALVPAPAPWVSWAVVAGWTVLACLAALRLGQRQQILS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31795; Mature: 31664

Theoretical pI: Translated: 9.66; Mature: 9.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLWSLLRTEGRLVWKGRWVALLTLALAAASVWGGPFGTYRYAVRSAERIHALRAAYEAE
CCHHHHHHHCCCEEECCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH
FAELILDDLVAELQGTLALLHPAMGPNYLLAILAVLGTMVLPIWGAQLVGNEFRHRTAKA
HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RAAHVGWGAMVAAKVAWLLLLSAGLAALFAGIGALSGQVTWRAAQDALLLAGEVTPPPLK
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHCHHEEECCCCCCCCC
APLFAQALTAALGLFFFGLVGLLAALVTRSALAGALVGLALPYVEAFVIGTPEWGWLLPR
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCHHHHHHH
IAYGNLMVDHFVYLPGGMVGEPLALVPAPAPWVSWAVVAGWTVLACLAALRLGQRQQILS
HHHHHHHHHHHHHCCCCCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHCC
>Mature Secondary Structure 
SLWSLLRTEGRLVWKGRWVALLTLALAAASVWGGPFGTYRYAVRSAERIHALRAAYEAE
CHHHHHHHCCCEEECCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH
FAELILDDLVAELQGTLALLHPAMGPNYLLAILAVLGTMVLPIWGAQLVGNEFRHRTAKA
HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RAAHVGWGAMVAAKVAWLLLLSAGLAALFAGIGALSGQVTWRAAQDALLLAGEVTPPPLK
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHCHHEEECCCCCCCCC
APLFAQALTAALGLFFFGLVGLLAALVTRSALAGALVGLALPYVEAFVIGTPEWGWLLPR
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCHHHHHHH
IAYGNLMVDHFVYLPGGMVGEPLALVPAPAPWVSWAVVAGWTVLACLAALRLGQRQQILS
HHHHHHHHHHHHHCCCCCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA