| Definition | Symbiobacterium thermophilum IAM 14863 chromosome, complete genome. |
|---|---|
| Accession | NC_006177 |
| Length | 3,566,135 |
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The map label for this gene is 51893097
Identifier: 51893097
GI number: 51893097
Start: 2098686
End: 2099588
Strand: Reverse
Name: 51893097
Synonym: STH1959
Alternate gene names: NA
Gene position: 2099588-2098686 (Counterclockwise)
Preceding gene: 51893098
Following gene: 51893096
Centisome position: 58.88
GC content: 73.42
Gene sequence:
>903_bases GTGAGCCTGTGGTCGCTGCTGCGGACGGAGGGCCGCCTGGTGTGGAAGGGCCGCTGGGTGGCCCTTCTCACGCTCGCGCT CGCCGCGGCGAGCGTGTGGGGCGGCCCCTTCGGCACCTATCGCTACGCGGTGCGCAGCGCGGAGCGCATCCACGCGCTGC GGGCGGCCTACGAGGCCGAGTTCGCCGAGCTCATCCTGGACGACCTCGTCGCCGAGCTGCAGGGGACGCTTGCCCTGCTC CATCCCGCCATGGGGCCCAACTACCTGCTGGCCATCCTGGCGGTGCTGGGGACGATGGTGCTGCCCATCTGGGGCGCCCA ACTGGTCGGCAACGAGTTCCGGCACCGCACGGCCAAGGCGCGGGCGGCGCACGTCGGCTGGGGGGCGATGGTGGCGGCGA AGGTCGCCTGGCTGCTCCTGCTCAGCGCCGGGCTGGCCGCGCTCTTCGCCGGGATCGGCGCCCTGAGCGGCCAGGTAACT TGGCGCGCAGCGCAGGACGCCCTCCTGCTCGCCGGCGAGGTGACCCCGCCGCCGCTGAAGGCGCCCCTGTTTGCGCAGGC GCTGACGGCGGCCCTGGGCCTCTTCTTCTTCGGCCTGGTCGGCCTGCTGGCCGCCCTGGTCACGCGCAGCGCCCTTGCCG GCGCGCTCGTCGGCCTCGCGCTGCCTTACGTGGAGGCGTTCGTCATCGGTACGCCCGAGTGGGGGTGGCTGCTTCCCCGC ATCGCCTACGGCAACCTGATGGTGGACCACTTCGTCTACCTGCCCGGGGGCATGGTGGGGGAGCCCCTGGCCCTGGTTCC GGCGCCGGCGCCCTGGGTTTCCTGGGCCGTCGTCGCCGGCTGGACCGTCCTGGCATGCCTCGCCGCCCTGCGCCTGGGTC AACGGCAGCAGATCCTGAGCTGA
Upstream 100 bases:
>100_bases AGATCCCCCTCCAGTCGCTGGAGCTTAGGGCCGCCACGCTGGAGGAAAGCTTCCGCCGGCTGGGGTTGTATGACGGGGAG GAGCAGCAGGAGGTGGCGCC
Downstream 100 bases:
>100_bases GTCACCGGTCAAGCCGGTGCCGCATACCCTATCCCGCACAGGAGGGGAGGGGTAGCGGTGCTTGCCATGTTGGGACCCTT GGCCGAAGCCATCGTGCGCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 300; Mature: 299
Protein sequence:
>300_residues MSLWSLLRTEGRLVWKGRWVALLTLALAAASVWGGPFGTYRYAVRSAERIHALRAAYEAEFAELILDDLVAELQGTLALL HPAMGPNYLLAILAVLGTMVLPIWGAQLVGNEFRHRTAKARAAHVGWGAMVAAKVAWLLLLSAGLAALFAGIGALSGQVT WRAAQDALLLAGEVTPPPLKAPLFAQALTAALGLFFFGLVGLLAALVTRSALAGALVGLALPYVEAFVIGTPEWGWLLPR IAYGNLMVDHFVYLPGGMVGEPLALVPAPAPWVSWAVVAGWTVLACLAALRLGQRQQILS
Sequences:
>Translated_300_residues MSLWSLLRTEGRLVWKGRWVALLTLALAAASVWGGPFGTYRYAVRSAERIHALRAAYEAEFAELILDDLVAELQGTLALL HPAMGPNYLLAILAVLGTMVLPIWGAQLVGNEFRHRTAKARAAHVGWGAMVAAKVAWLLLLSAGLAALFAGIGALSGQVT WRAAQDALLLAGEVTPPPLKAPLFAQALTAALGLFFFGLVGLLAALVTRSALAGALVGLALPYVEAFVIGTPEWGWLLPR IAYGNLMVDHFVYLPGGMVGEPLALVPAPAPWVSWAVVAGWTVLACLAALRLGQRQQILS >Mature_299_residues SLWSLLRTEGRLVWKGRWVALLTLALAAASVWGGPFGTYRYAVRSAERIHALRAAYEAEFAELILDDLVAELQGTLALLH PAMGPNYLLAILAVLGTMVLPIWGAQLVGNEFRHRTAKARAAHVGWGAMVAAKVAWLLLLSAGLAALFAGIGALSGQVTW RAAQDALLLAGEVTPPPLKAPLFAQALTAALGLFFFGLVGLLAALVTRSALAGALVGLALPYVEAFVIGTPEWGWLLPRI AYGNLMVDHFVYLPGGMVGEPLALVPAPAPWVSWAVVAGWTVLACLAALRLGQRQQILS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31795; Mature: 31664
Theoretical pI: Translated: 9.66; Mature: 9.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLWSLLRTEGRLVWKGRWVALLTLALAAASVWGGPFGTYRYAVRSAERIHALRAAYEAE CCHHHHHHHCCCEEECCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH FAELILDDLVAELQGTLALLHPAMGPNYLLAILAVLGTMVLPIWGAQLVGNEFRHRTAKA HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RAAHVGWGAMVAAKVAWLLLLSAGLAALFAGIGALSGQVTWRAAQDALLLAGEVTPPPLK HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHCHHEEECCCCCCCCC APLFAQALTAALGLFFFGLVGLLAALVTRSALAGALVGLALPYVEAFVIGTPEWGWLLPR CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCHHHHHHH IAYGNLMVDHFVYLPGGMVGEPLALVPAPAPWVSWAVVAGWTVLACLAALRLGQRQQILS HHHHHHHHHHHHHCCCCCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHCC >Mature Secondary Structure SLWSLLRTEGRLVWKGRWVALLTLALAAASVWGGPFGTYRYAVRSAERIHALRAAYEAE CHHHHHHHCCCEEECCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH FAELILDDLVAELQGTLALLHPAMGPNYLLAILAVLGTMVLPIWGAQLVGNEFRHRTAKA HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RAAHVGWGAMVAAKVAWLLLLSAGLAALFAGIGALSGQVTWRAAQDALLLAGEVTPPPLK HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHCHHEEECCCCCCCCC APLFAQALTAALGLFFFGLVGLLAALVTRSALAGALVGLALPYVEAFVIGTPEWGWLLPR CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCHHHHHHH IAYGNLMVDHFVYLPGGMVGEPLALVPAPAPWVSWAVVAGWTVLACLAALRLGQRQQILS HHHHHHHHHHHHHCCCCCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA