Click here to switch to the map view.

The map label for this gene is psuG

Identifier: 51893085

GI number: 51893085

Start: 2088276

End: 2089202

Strand: Reverse

Name: psuG

Synonym: STH1947

Alternate gene names: 51893085

Gene position: 2089202-2088276 (Counterclockwise)

Preceding gene: 51893086

Following gene: 51893084

Centisome position: 58.58

GC content: 71.74

Gene sequence:

>927_bases
ATGAAGTACCTGTTGTCGTATACGCCGGAGGTTCGGGAGGCCCTGGACCGGAACCGGCCCGTGGTGGCCCTGGAGTCGAC
CATCATCAGCCACGGCATGCCGTACCCCGAGAACCTGCGCACCGCCCGGGAGGTGGAGGAGATCGTCCGCAGCCAGGGCG
CGGTCCCGGCGACGATTGCGGTGATCGGCGGCCGCTGCAAGGTGGGGCTGACGGACGAGGAGCTGGAGCTGCTCGCGACC
TCGCCCGAGGCGGTGAAGGTGTCGCTGCGCGACCTGCCGGTGGTGCTGGCGCGCAAGTCCCTGGGGGCGACCACCGTCGC
CACCACGGCGACCATCGCGGCGGCGGCGGGGATCGAGGTGTTCGTGACCGGCGGCATCGGCGGTGTCCATCGCAAGAGCC
CGGGCGACCCCGCGCAGATGTGGGACGTGTCCGCGGACCTGACCGTGCTGGGCCGCACGGACATCACGGTGGTCTGCGCC
GGGGCCAAGTCGGTGCTGGACATCGGCGCGACCCTGGAGGTTCTGGAGACGCTGGGGGTGACGGTGCTGGGCTACCGGAC
CGACCGGTTCCCCGGCTTCTACACCCGGGACACCGGGTTCGGCGTGGACGCCCGGGTGGACACGCCGGAGGAGGCCGCGG
CCGTCATCCACGCGCGGCAGCAGACCATGCTCCCCGGCGGCGTGCTGGTGGTCAACCCCGTGCCGGAGGAGCACGCCATG
GACCCCGACGAGGTGGAGCGGCACATCGCGGACGCCCTGAAGGCCATGGCGGCCGAGGGGGTGACCGGCAAGGCGGTGAC
CCCGTACCTGCTGGCCCGGCTGAAGGAGGTCACCAGCGGCCGGGCGCTGCAGACCAACATCGCGCTGGTCAAGCACAACG
CCCTGGTGGGCGCGCAGATCGCCGTCGCCCTGAAGGCCGGAAAGTAG

Upstream 100 bases:

>100_bases
GGGTGATGCCCGTGCGGCCCGGCGAGGTGGTCGTCACGCCCGACGTTTCGCCCGATGCCATCCGGTGGGGACTGGAAGCG
CTGAGGAGGTAAGGATTCAG

Downstream 100 bases:

>100_bases
CCGCTGCACATGGCCGACCCCCGTTCCGTCACGGGAACGGGGGTTTTGCGCGGGGCATTCCCCGAGGGCATAAGAGAAAT
AGAACATCGTTCTGTACCGT

Product: hypothetical protein

Products: NA

Alternate protein names: PsiMP glycosidase

Number of amino acids: Translated: 308; Mature: 308

Protein sequence:

>308_residues
MKYLLSYTPEVREALDRNRPVVALESTIISHGMPYPENLRTAREVEEIVRSQGAVPATIAVIGGRCKVGLTDEELELLAT
SPEAVKVSLRDLPVVLARKSLGATTVATTATIAAAAGIEVFVTGGIGGVHRKSPGDPAQMWDVSADLTVLGRTDITVVCA
GAKSVLDIGATLEVLETLGVTVLGYRTDRFPGFYTRDTGFGVDARVDTPEEAAAVIHARQQTMLPGGVLVVNPVPEEHAM
DPDEVERHIADALKAMAAEGVTGKAVTPYLLARLKEVTSGRALQTNIALVKHNALVGAQIAVALKAGK

Sequences:

>Translated_308_residues
MKYLLSYTPEVREALDRNRPVVALESTIISHGMPYPENLRTAREVEEIVRSQGAVPATIAVIGGRCKVGLTDEELELLAT
SPEAVKVSLRDLPVVLARKSLGATTVATTATIAAAAGIEVFVTGGIGGVHRKSPGDPAQMWDVSADLTVLGRTDITVVCA
GAKSVLDIGATLEVLETLGVTVLGYRTDRFPGFYTRDTGFGVDARVDTPEEAAAVIHARQQTMLPGGVLVVNPVPEEHAM
DPDEVERHIADALKAMAAEGVTGKAVTPYLLARLKEVTSGRALQTNIALVKHNALVGAQIAVALKAGK
>Mature_308_residues
MKYLLSYTPEVREALDRNRPVVALESTIISHGMPYPENLRTAREVEEIVRSQGAVPATIAVIGGRCKVGLTDEELELLAT
SPEAVKVSLRDLPVVLARKSLGATTVATTATIAAAAGIEVFVTGGIGGVHRKSPGDPAQMWDVSADLTVLGRTDITVVCA
GAKSVLDIGATLEVLETLGVTVLGYRTDRFPGFYTRDTGFGVDARVDTPEEAAAVIHARQQTMLPGGVLVVNPVPEEHAM
DPDEVERHIADALKAMAAEGVTGKAVTPYLLARLKEVTSGRALQTNIALVKHNALVGAQIAVALKAGK

Specific function: Catalyzes the hydrolysis of pseudouridine 5'-phosphate (PsiMP) to ribose 5-phosphate and uracil

COG id: COG2313

COG function: function code Q; Uncharacterized enzyme involved in pigment biosynthesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the pseudouridine-5'-phosphate glycosidase family

Homologues:

Organism=Escherichia coli, GI1788490, Length=299, Percent_Identity=53.5117056856187, Blast_Score=305, Evalue=4e-84,
Organism=Caenorhabditis elegans, GI25147470, Length=302, Percent_Identity=46.0264900662252, Blast_Score=266, Evalue=1e-71,
Organism=Drosophila melanogaster, GI24580669, Length=300, Percent_Identity=52, Blast_Score=290, Evalue=6e-79,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): PSUG_SYMTH (Q67N11)

Other databases:

- EMBL:   AP006840
- RefSeq:   YP_075776.1
- ProteinModelPortal:   Q67N11
- SMR:   Q67N11
- GeneID:   2980939
- GenomeReviews:   AP006840_GR
- KEGG:   sth:STH1947
- NMPDR:   fig|292459.1.peg.1877
- HOGENOM:   HBG308892
- OMA:   PATIAVM
- ProtClustDB:   CLSK862888
- BioCyc:   STHE292459:STH1947-MONOMER
- HAMAP:   MF_01876
- InterPro:   IPR022830
- InterPro:   IPR007342
- PANTHER:   PTHR10584:SF1

Pfam domain/function: PF04227 Indigoidine_A; SSF110581 Indigdn_synthA

EC number: NA

Molecular weight: Translated: 32443; Mature: 32443

Theoretical pI: Translated: 5.69; Mature: 5.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKYLLSYTPEVREALDRNRPVVALESTIISHGMPYPENLRTAREVEEIVRSQGAVPATIA
CCCCCCCCHHHHHHHHCCCCEEEEEHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCEEEE
VIGGRCKVGLTDEELELLATSPEAVKVSLRDLPVVLARKSLGATTVATTATIAAAAGIEV
EECCEEEECCCHHHHHEEECCCHHEEEEHHHCCEEEHHHCCCCHHHHHHHHHHHHCCEEE
FVTGGIGGVHRKSPGDPAQMWDVSADLTVLGRTDITVVCAGAKSVLDIGATLEVLETLGV
EEECCCCCCCCCCCCCHHHHEECCCCEEEEECCCEEEEECCCHHHHHHHHHHHHHHHCCC
TVLGYRTDRFPGFYTRDTGFGVDARVDTPEEAAAVIHARQQTMLPGGVLVVNPVPEEHAM
EEEEEECCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCHHHCC
DPDEVERHIADALKAMAAEGVTGKAVTPYLLARLKEVTSGRALQTNIALVKHNALVGAQI
CHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCEEEEEEEEEECCCEECCEE
AVALKAGK
EEEEECCC
>Mature Secondary Structure
MKYLLSYTPEVREALDRNRPVVALESTIISHGMPYPENLRTAREVEEIVRSQGAVPATIA
CCCCCCCCHHHHHHHHCCCCEEEEEHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCEEEE
VIGGRCKVGLTDEELELLATSPEAVKVSLRDLPVVLARKSLGATTVATTATIAAAAGIEV
EECCEEEECCCHHHHHEEECCCHHEEEEHHHCCEEEHHHCCCCHHHHHHHHHHHHCCEEE
FVTGGIGGVHRKSPGDPAQMWDVSADLTVLGRTDITVVCAGAKSVLDIGATLEVLETLGV
EEECCCCCCCCCCCCCHHHHEECCCCEEEEECCCEEEEECCCHHHHHHHHHHHHHHHCCC
TVLGYRTDRFPGFYTRDTGFGVDARVDTPEEAAAVIHARQQTMLPGGVLVVNPVPEEHAM
EEEEEECCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCHHHCC
DPDEVERHIADALKAMAAEGVTGKAVTPYLLARLKEVTSGRALQTNIALVKHNALVGAQI
CHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCEEEEEEEEEECCCEECCEE
AVALKAGK
EEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA