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The map label for this gene is yvrC [H]

Identifier: 51893073

GI number: 51893073

Start: 2077296

End: 2078333

Strand: Reverse

Name: yvrC [H]

Synonym: STH1935

Alternate gene names: 51893073

Gene position: 2078333-2077296 (Counterclockwise)

Preceding gene: 51893074

Following gene: 51893072

Centisome position: 58.28

GC content: 71.58

Gene sequence:

>1038_bases
ATGAGAAAGCAGAGGCTGGGCGCGCTGCTGATCTCCGCGCTCCTGGCGGCCCTGCTCGCCGCGTGCAGCGGCGGGTCGCC
GGGCGACGGGTCCGGCGCGGCCGGAGGGCAGGCGGGCGGACAGCAGGCGAGCGTAGGGCAGTCGACTGGAGAGCAGACGA
CCGGAGAGCCTGCGACTGGAGAGCAGACGGGTGGGCAGCAGGCAGGCGGCGAGACCGCCTATCCCATCACGCTGGTGGAC
GGCGCCGGGCGGGAGGTCACCATCGACGCCGAGCCGCAGCGCATCCTGTCGCTGGGCCCCTCGGCCACGGAGACGCTCTT
CGCCCTGGGCCGTGGCGACCGACTGGTCGGCCGCACCGACTGGTGCAACTTCCCGGAGGCGGCCCTGGAGGTGCCGTCGG
TGGGCAGCCTCTTCCCGCCCGACTACGAGCGCATCCTGTCCACGGAGCCTGACCTGGTGGTCATGATCGAGGGCTCGGTG
GATGTGCGGGAGCGGCTGGAGCAGGAGTACGGCCTGACGGTCTTCGTCTACGCTCCGGCGAGCTTTGAGCAGCTCTACGC
CCAGATGGTGGCGCTCGGTCAGGCGGTGAACGCCCGGGAGGCGGCGGAGGCGATCGTCGCCGAGATCCAGGGAGAGGTCG
ACGCGATCTACGCGAAGGTCCTTCCCATCAGCTACTCGCCGTCGGTCTTCTATCAGGTGTGGCCGGATCCGCTCTCCACC
GCCGGGCCCGGCTCGTTCATCGACGACATGATCCGCATCGCCGGCGGCAGCAACGTGGCCGGCGACGCGGACGGCCCGTG
GCCCGTGTACTCGCTGGAGCAGCTGCTCGCGGCGGACCCCGCCATCATCGTGGCGGGCTCGGAGGCCATGGCGCAGGACA
TCCTGACCCGGCCCGGCTGGGAGTCGCTCAGAGCGGTGCGGGAGGGCCGGGTGTACGGCGTGCCCAACGAGGACATCGTG
GTCCGGCCGGGCCCGCGGCTGGTGGAGGGGCTGCGCTGGTTCGCCGAAACCCTGCACCCCGGGCTGTTCGGGCAATGA

Upstream 100 bases:

>100_bases
CCTCTGGTTGAGTCCAGAGGGGGTTTTCGTTGCTGCCGTATGTGCTCTGGGACCTACATGACGATGCATGGCGATTACGC
TGACACAGGAGGTACACTGC

Downstream 100 bases:

>100_bases
CGGGACGGGCGACCCGCGGCCGCAGGGCGATGACCTTGACCGCGGTGGCCCTGCTGGCCGCGCTGATCGTGGCGGGCGCC
CTGGGTTCGGTGCGCATCCC

Product: iron ABC transporter substrate-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 345; Mature: 345

Protein sequence:

>345_residues
MRKQRLGALLISALLAALLAACSGGSPGDGSGAAGGQAGGQQASVGQSTGEQTTGEPATGEQTGGQQAGGETAYPITLVD
GAGREVTIDAEPQRILSLGPSATETLFALGRGDRLVGRTDWCNFPEAALEVPSVGSLFPPDYERILSTEPDLVVMIEGSV
DVRERLEQEYGLTVFVYAPASFEQLYAQMVALGQAVNAREAAEAIVAEIQGEVDAIYAKVLPISYSPSVFYQVWPDPLST
AGPGSFIDDMIRIAGGSNVAGDADGPWPVYSLEQLLAADPAIIVAGSEAMAQDILTRPGWESLRAVREGRVYGVPNEDIV
VRPGPRLVEGLRWFAETLHPGLFGQ

Sequences:

>Translated_345_residues
MRKQRLGALLISALLAALLAACSGGSPGDGSGAAGGQAGGQQASVGQSTGEQTTGEPATGEQTGGQQAGGETAYPITLVD
GAGREVTIDAEPQRILSLGPSATETLFALGRGDRLVGRTDWCNFPEAALEVPSVGSLFPPDYERILSTEPDLVVMIEGSV
DVRERLEQEYGLTVFVYAPASFEQLYAQMVALGQAVNAREAAEAIVAEIQGEVDAIYAKVLPISYSPSVFYQVWPDPLST
AGPGSFIDDMIRIAGGSNVAGDADGPWPVYSLEQLLAADPAIIVAGSEAMAQDILTRPGWESLRAVREGRVYGVPNEDIV
VRPGPRLVEGLRWFAETLHPGLFGQ
>Mature_345_residues
MRKQRLGALLISALLAALLAACSGGSPGDGSGAAGGQAGGQQASVGQSTGEQTTGEPATGEQTGGQQAGGETAYPITLVD
GAGREVTIDAEPQRILSLGPSATETLFALGRGDRLVGRTDWCNFPEAALEVPSVGSLFPPDYERILSTEPDLVVMIEGSV
DVRERLEQEYGLTVFVYAPASFEQLYAQMVALGQAVNAREAAEAIVAEIQGEVDAIYAKVLPISYSPSVFYQVWPDPLST
AGPGSFIDDMIRIAGGSNVAGDADGPWPVYSLEQLLAADPAIIVAGSEAMAQDILTRPGWESLRAVREGRVYGVPNEDIV
VRPGPRLVEGLRWFAETLHPGLFGQ

Specific function: Probably part of an ABC transporter complex [H]

COG id: COG0614

COG function: function code P; ABC-type Fe3+-hydroxamate transport system, periplasmic component

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Fe/B12 periplasmic-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1786353, Length=206, Percent_Identity=29.126213592233, Blast_Score=71, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002491 [H]

Pfam domain/function: PF01497 Peripla_BP_2 [H]

EC number: NA

Molecular weight: Translated: 36157; Mature: 36157

Theoretical pI: Translated: 4.03; Mature: 4.03

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50983 FE_B12_PBP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKQRLGALLISALLAALLAACSGGSPGDGSGAAGGQAGGQQASVGQSTGEQTTGEPATG
CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
EQTGGQQAGGETAYPITLVDGAGREVTIDAEPQRILSLGPSATETLFALGRGDRLVGRTD
CCCCCCCCCCCCCCEEEEECCCCCEEEECCCCHHHHHCCCCHHHHHHHHCCCCEEECCCC
WCNFPEAALEVPSVGSLFPPDYERILSTEPDLVVMIEGSVDVRERLEQEYGLTVFVYAPA
CCCCCHHHHCCCCCCCCCCCCHHHHHCCCCCEEEEEECCCHHHHHHHHHCCCEEEEECCC
SFEQLYAQMVALGQAVNAREAAEAIVAEIQGEVDAIYAKVLPISYSPSVFYQVWPDPLST
CHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCEEEEECCCCCCC
AGPGSFIDDMIRIAGGSNVAGDADGPWPVYSLEQLLAADPAIIVAGSEAMAQDILTRPGW
CCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCEEEEECCHHHHHHHHCCCCH
ESLRAVREGRVYGVPNEDIVVRPGPRLVEGLRWFAETLHPGLFGQ
HHHHHHHCCCEEECCCCCEEECCCHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MRKQRLGALLISALLAALLAACSGGSPGDGSGAAGGQAGGQQASVGQSTGEQTTGEPATG
CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
EQTGGQQAGGETAYPITLVDGAGREVTIDAEPQRILSLGPSATETLFALGRGDRLVGRTD
CCCCCCCCCCCCCCEEEEECCCCCEEEECCCCHHHHHCCCCHHHHHHHHCCCCEEECCCC
WCNFPEAALEVPSVGSLFPPDYERILSTEPDLVVMIEGSVDVRERLEQEYGLTVFVYAPA
CCCCCHHHHCCCCCCCCCCCCHHHHHCCCCCEEEEEECCCHHHHHHHHHCCCEEEEECCC
SFEQLYAQMVALGQAVNAREAAEAIVAEIQGEVDAIYAKVLPISYSPSVFYQVWPDPLST
CHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCEEEEECCCCCCC
AGPGSFIDDMIRIAGGSNVAGDADGPWPVYSLEQLLAADPAIIVAGSEAMAQDILTRPGW
CCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCEEEEECCHHHHHHHHCCCCH
ESLRAVREGRVYGVPNEDIVVRPGPRLVEGLRWFAETLHPGLFGQ
HHHHHHHCCCEEECCCCCEEECCCHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9639930; 9384377 [H]