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The map label for this gene is yvrB [H]

Identifier: 51893072

GI number: 51893072

Start: 2076250

End: 2077299

Strand: Reverse

Name: yvrB [H]

Synonym: STH1934

Alternate gene names: 51893072

Gene position: 2077299-2076250 (Counterclockwise)

Preceding gene: 51893073

Following gene: 51893071

Centisome position: 58.25

GC content: 72.57

Gene sequence:

>1050_bases
ATGACGGGACGGGCGACCCGCGGCCGCAGGGCGATGACCTTGACCGCGGTGGCCCTGCTGGCCGCGCTGATCGTGGCGGG
CGCCCTGGGTTCGGTGCGCATCCCGCCGGCGGACGTGGTGAAGATCCTGCTGAATCGGCTGGGGGCGGACTTCCCGGCCA
CCTGGCCCCGCACCTGGGAGGCGGTCCTGTGGGACGTCCGCTTCCCCCGGGTGGCCATGGGGGCCCTGGTGGGCATGGGG
CTCAGCGTGGCAGGGGCGGCGTACCAGGGGCTCTTCCGCAATCCCCTCGCGGACCCGTCGGTCATCGGCGCCTCGGCCGG
CGCCTCGCTGGGCGCCGCGCTGGCCATCGCCTTTTTCGACCGCGTTCCCTCCCTGACCGGCCTGTGGCGGCTGGGGCCGG
TCCCGCTCTTTGCCTTCGCCGGCGGGGTGGCAGCGGTCCTGGTAGCCTTCCGCCTGGCGACCGCCGGCCGGCAGACCTCC
ACGGTGAGCCTCCTGCTGGCCGGCATGGTGGTCAGCACCGTTGCCACCTCCCTGGTCTCGCTGATCATGTATTTCACCGA
CTCCCAGGCCCGGGACGCCATCGTCTTCTGGCTGATGGGCGGCCTCTCCGGGGCCAACTGGCCGAAGGCGGCCTGGCTCC
TGCCGTACCTGGCGCTGGGGCTGGGGCTCCTGCTCTGGGACGGCCGGGAGCTGAACGCCTTCCTGCTGGGCGAGGAGGCA
GCGCTGTCGATGGGCGTGGACGTGGAGCGGCTGAAGCGGCGGATCCTGGCCGCCGGGTCGCTGCTCACCGCCGCGGCGGT
CGCCTTCTGCGGGATCATCAGCTTCGTGGGGTTAATCGTGCCGCACCTGGTGCGGCTGCTGGTGGGCCCCGACCATCGTT
GGCTCCTCCCGATCGCGGCCGTCACGGGGTCCGTGGTGGTGGTCGCGGCGGACACCGTGGCCCGCTCGCTGCCCTGGGTC
AGCGAACTGCCCGTGGGGCTGGTGATGTCCCTCATCGGCGGGCCGGTCTTCCTGGTCATCCTGCGGCGGCAGCTCTTGCC
TGGTTCGTGA

Upstream 100 bases:

>100_bases
ACGGCGTGCCCAACGAGGACATCGTGGTCCGGCCGGGCCCGCGGCTGGTGGAGGGGCTGCGCTGGTTCGCCGAAACCCTG
CACCCCGGGCTGTTCGGGCA

Downstream 100 bases:

>100_bases
AAGGAGGTGGACGCCGATGCTGCGCATCGAATCGCTCGCCGTGGGCTATGGCGGCGAGCCGGTCCTCAACGGGCTGGACC
TGGCCGTCGCCCGGGGCGAG

Product: iron ABC transporter permease protein

Products: ADP; phosphate; cob(I)alamin [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 349; Mature: 348

Protein sequence:

>349_residues
MTGRATRGRRAMTLTAVALLAALIVAGALGSVRIPPADVVKILLNRLGADFPATWPRTWEAVLWDVRFPRVAMGALVGMG
LSVAGAAYQGLFRNPLADPSVIGASAGASLGAALAIAFFDRVPSLTGLWRLGPVPLFAFAGGVAAVLVAFRLATAGRQTS
TVSLLLAGMVVSTVATSLVSLIMYFTDSQARDAIVFWLMGGLSGANWPKAAWLLPYLALGLGLLLWDGRELNAFLLGEEA
ALSMGVDVERLKRRILAAGSLLTAAAVAFCGIISFVGLIVPHLVRLLVGPDHRWLLPIAAVTGSVVVVAADTVARSLPWV
SELPVGLVMSLIGGPVFLVILRRQLLPGS

Sequences:

>Translated_349_residues
MTGRATRGRRAMTLTAVALLAALIVAGALGSVRIPPADVVKILLNRLGADFPATWPRTWEAVLWDVRFPRVAMGALVGMG
LSVAGAAYQGLFRNPLADPSVIGASAGASLGAALAIAFFDRVPSLTGLWRLGPVPLFAFAGGVAAVLVAFRLATAGRQTS
TVSLLLAGMVVSTVATSLVSLIMYFTDSQARDAIVFWLMGGLSGANWPKAAWLLPYLALGLGLLLWDGRELNAFLLGEEA
ALSMGVDVERLKRRILAAGSLLTAAAVAFCGIISFVGLIVPHLVRLLVGPDHRWLLPIAAVTGSVVVVAADTVARSLPWV
SELPVGLVMSLIGGPVFLVILRRQLLPGS
>Mature_348_residues
TGRATRGRRAMTLTAVALLAALIVAGALGSVRIPPADVVKILLNRLGADFPATWPRTWEAVLWDVRFPRVAMGALVGMGL
SVAGAAYQGLFRNPLADPSVIGASAGASLGAALAIAFFDRVPSLTGLWRLGPVPLFAFAGGVAAVLVAFRLATAGRQTST
VSLLLAGMVVSTVATSLVSLIMYFTDSQARDAIVFWLMGGLSGANWPKAAWLLPYLALGLGLLLWDGRELNAFLLGEEAA
LSMGVDVERLKRRILAAGSLLTAAAVAFCGIISFVGLIVPHLVRLLVGPDHRWLLPIAAVTGSVVVVAADTVARSLPWVS
ELPVGLVMSLIGGPVFLVILRRQLLPGS

Specific function: Probably part of an ABC transporter complex. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0609

COG function: function code P; ABC-type Fe3+-siderophore transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily [H]

Homologues:

Organism=Escherichia coli, GI1788004, Length=298, Percent_Identity=36.5771812080537, Blast_Score=142, Evalue=4e-35,
Organism=Escherichia coli, GI1790740, Length=283, Percent_Identity=36.0424028268551, Blast_Score=141, Evalue=8e-35,
Organism=Escherichia coli, GI1790741, Length=314, Percent_Identity=33.4394904458599, Blast_Score=125, Evalue=3e-30,
Organism=Escherichia coli, GI1786805, Length=296, Percent_Identity=36.4864864864865, Blast_Score=125, Evalue=4e-30,
Organism=Escherichia coli, GI1786804, Length=338, Percent_Identity=30.7692307692308, Blast_Score=93, Evalue=2e-20,
Organism=Escherichia coli, GI1786347, Length=281, Percent_Identity=29.8932384341637, Blast_Score=77, Evalue=2e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000522 [H]

Pfam domain/function: PF01032 FecCD [H]

EC number: NA

Molecular weight: Translated: 36428; Mature: 36297

Theoretical pI: Translated: 11.57; Mature: 11.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTGRATRGRRAMTLTAVALLAALIVAGALGSVRIPPADVVKILLNRLGADFPATWPRTWE
CCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHH
AVLWDVRFPRVAMGALVGMGLSVAGAAYQGLFRNPLADPSVIGASAGASLGAALAIAFFD
HHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHH
RVPSLTGLWRLGPVPLFAFAGGVAAVLVAFRLATAGRQTSTVSLLLAGMVVSTVATSLVS
HCCCHHCHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
LIMYFTDSQARDAIVFWLMGGLSGANWPKAAWLLPYLALGLGLLLWDGRELNAFLLGEEA
HHHHHCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEECCHH
ALSMGVDVERLKRRILAAGSLLTAAAVAFCGIISFVGLIVPHLVRLLVGPDHRWLLPIAA
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
VTGSVVVVAADTVARSLPWVSELPVGLVMSLIGGPVFLVILRRQLLPGS
HCCCEEEEEEHHHHHHCCCHHHCHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
TGRATRGRRAMTLTAVALLAALIVAGALGSVRIPPADVVKILLNRLGADFPATWPRTWE
CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHH
AVLWDVRFPRVAMGALVGMGLSVAGAAYQGLFRNPLADPSVIGASAGASLGAALAIAFFD
HHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHH
RVPSLTGLWRLGPVPLFAFAGGVAAVLVAFRLATAGRQTSTVSLLLAGMVVSTVATSLVS
HCCCHHCHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
LIMYFTDSQARDAIVFWLMGGLSGANWPKAAWLLPYLALGLGLLLWDGRELNAFLLGEEA
HHHHHCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEECCHH
ALSMGVDVERLKRRILAAGSLLTAAAVAFCGIISFVGLIVPHLVRLLVGPDHRWLLPIAA
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
VTGSVVVVAADTVARSLPWVSELPVGLVMSLIGGPVFLVILRRQLLPGS
HCCCEEEEEEHHHHHHCCCHHHCHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; cob(I)alamin [Periplasm]; H2O [C]

Specific reaction: ATP + cob(I)alamin [Periplasm] + H2O = ADP + phosphate + cob(I)alamin [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9639930; 9384377 [H]