| Definition | Symbiobacterium thermophilum IAM 14863 chromosome, complete genome. |
|---|---|
| Accession | NC_006177 |
| Length | 3,566,135 |
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The map label for this gene is 51893069
Identifier: 51893069
GI number: 51893069
Start: 2073437
End: 2074093
Strand: Reverse
Name: 51893069
Synonym: STH1931
Alternate gene names: NA
Gene position: 2074093-2073437 (Counterclockwise)
Preceding gene: 51893070
Following gene: 51893068
Centisome position: 58.16
GC content: 70.93
Gene sequence:
>657_bases GTGCCCCTGGAACACCTGACGACGACCAGCGGAATCGGAGCACCAAAGCATCGGTGCACAGTAGCCTGCCGGACTGGCAC CGGCGAAAGCAGGGCGCAACGAGGCGCCGCCGAGTACGGGCACAACGGCGTGCCCACCAAGCGATTGCTACTGGGAAGAG GAGGTCTGCTCGTGCTGCTGGCGAGGACAAACACCCTGGTGAGGCTCGGAATCCTGCTGGCCCTCAGCGTGCTGGGCGCC TACATCAAGTTGGGGCCGAGCTCCATCGCCTTCGACGCGATGGCCGGCTTCGTGGCTGCGCTCCTCATGGGCCCCGCGGC CGGCGCCCTGATCTGCGGTCTGGGGCATGTGGCCGTGGCGGCCGTCACCGGCTTTCCGCTCACCCTGCCGTTTCATCTGG CCAGCGCCGCGGCCATGGCCGGCGTGGGCTGCCTGGGCGGGCTTGCAGCCCGGCGCTTCGGTCTGGTGGCCGGCGCGGCG GTGCTGGTGGTGGCCAACGGCATCCTGGCACCGGCCCTGCTGGCTCTGCTGCCAAACCCGCTGGGGCTCGGTCTGTTCGC GGCCCTGGCCCTCCCGCTCACCGTCGCTGCGGGAGCCAACGCAGCCGTCGCGCTGCTGGTGGTGCTGGGCCTGAGGCGGG CGGGGGTCGAGGGATGA
Upstream 100 bases:
>100_bases GCGTTCGATCTGTCATTTCTTTCCCTCGGGCTGAGCCCGGGGGTTTTCTTTATCGGTCTCTCGGTCACAGCGCGGTGCCT GAGAGGCCGGGCACAACGGC
Downstream 100 bases:
>100_bases GGTGGCGGGACCTGACCCTGGTGGACCTGCCGTGCGGCGGCCGGCTGGTCATCGCCTGCGATGCCGCCGGCGGCATCGGG CCGAAGGAGCGCGACGTGAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 218; Mature: 217
Protein sequence:
>218_residues MPLEHLTTTSGIGAPKHRCTVACRTGTGESRAQRGAAEYGHNGVPTKRLLLGRGGLLVLLARTNTLVRLGILLALSVLGA YIKLGPSSIAFDAMAGFVAALLMGPAAGALICGLGHVAVAAVTGFPLTLPFHLASAAAMAGVGCLGGLAARRFGLVAGAA VLVVANGILAPALLALLPNPLGLGLFAALALPLTVAAGANAAVALLVVLGLRRAGVEG
Sequences:
>Translated_218_residues MPLEHLTTTSGIGAPKHRCTVACRTGTGESRAQRGAAEYGHNGVPTKRLLLGRGGLLVLLARTNTLVRLGILLALSVLGA YIKLGPSSIAFDAMAGFVAALLMGPAAGALICGLGHVAVAAVTGFPLTLPFHLASAAAMAGVGCLGGLAARRFGLVAGAA VLVVANGILAPALLALLPNPLGLGLFAALALPLTVAAGANAAVALLVVLGLRRAGVEG >Mature_217_residues PLEHLTTTSGIGAPKHRCTVACRTGTGESRAQRGAAEYGHNGVPTKRLLLGRGGLLVLLARTNTLVRLGILLALSVLGAY IKLGPSSIAFDAMAGFVAALLMGPAAGALICGLGHVAVAAVTGFPLTLPFHLASAAAMAGVGCLGGLAARRFGLVAGAAV LVVANGILAPALLALLPNPLGLGLFAALALPLTVAAGANAAVALLVVLGLRRAGVEG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21441; Mature: 21310
Theoretical pI: Translated: 11.34; Mature: 11.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLEHLTTTSGIGAPKHRCTVACRTGTGESRAQRGAAEYGHNGVPTKRLLLGRGGLLVLL CCCCCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHCCCCCCHHHHHCCCCCEEEEE ARTNTLVRLGILLALSVLGAYIKLGPSSIAFDAMAGFVAALLMGPAAGALICGLGHVAVA ECCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH AVTGFPLTLPFHLASAAAMAGVGCLGGLAARRFGLVAGAAVLVVANGILAPALLALLPNP HHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC LGLGLFAALALPLTVAAGANAAVALLVVLGLRRAGVEG CHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure PLEHLTTTSGIGAPKHRCTVACRTGTGESRAQRGAAEYGHNGVPTKRLLLGRGGLLVLL CCCCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHCCCCCCHHHHHCCCCCEEEEE ARTNTLVRLGILLALSVLGAYIKLGPSSIAFDAMAGFVAALLMGPAAGALICGLGHVAVA ECCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH AVTGFPLTLPFHLASAAAMAGVGCLGGLAARRFGLVAGAAVLVVANGILAPALLALLPNP HHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC LGLGLFAALALPLTVAAGANAAVALLVVLGLRRAGVEG CHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA