| Definition | Symbiobacterium thermophilum IAM 14863 chromosome, complete genome. |
|---|---|
| Accession | NC_006177 |
| Length | 3,566,135 |
Click here to switch to the map view.
The map label for this gene is 51893068
Identifier: 51893068
GI number: 51893068
Start: 2072709
End: 2073440
Strand: Reverse
Name: 51893068
Synonym: STH1930
Alternate gene names: NA
Gene position: 2073440-2072709 (Counterclockwise)
Preceding gene: 51893069
Following gene: 51893067
Centisome position: 58.14
GC content: 73.36
Gene sequence:
>732_bases ATGAGGTGGCGGGACCTGACCCTGGTGGACCTGCCGTGCGGCGGCCGGCTGGTCATCGCCTGCGATGCCGCCGGCGGCAT CGGGCCGAAGGAGCGCGACGTGATTCGGGTGGCCGGGTACGTCATCGGGCGGTTCACTGCCCGGGTGGCCCTCATGGATC TGCTCGCCGCCGGCGCGCAGCCGCTCCACCTGGTGAACAACACCTGCGTGGAGCCTGATCCCACCGGGCGGGAGATCCTG CAGGGCATCTGCGACGAGGCGGCCCTGGCGGGCCTTTCCGCCGACCAGATCAACGGCTCCTTCGAGAAGAACATTCCGAC GGTCCAGACGGGCCTGGGGGTGACCGCCATCGGTTACCTGGCCCCGGGCCGGTCGCTGCGCACGGCGCGGCCGGGCGACC TGGTCGTCGCCATCGGGCGGCCGAAGGTCGGGGCCGAGGTGCGGCTGGATGACCCCGAACTGCCCGATCTTCCCCTGGTC CGGCGGCTCGCCGGCGACCCGCTGGTGCACGACCTGTTGCCCGTGGGCTCCCGTGGGATCCGCGCCGAGGCGGAGGATCT CGCCGCCAGCGCGGGGCTGGAGGTGGAGTGGGCCCCGGCGGAAGCGGGTTTCCCCCTCGGGAAGTCGGCGGGTCCGGTCA CCTGTCTGCTGGTCGCGGCGGCGCCGTCGGCCCTGCAGGGGCTGGCCCTCACGCTCACCCAGCCGTGGGCGGTCGTCGCG CAGCTTCGATAG
Upstream 100 bases:
>100_bases TGTTCGCGGCCCTGGCCCTCCCGCTCACCGTCGCTGCGGGAGCCAACGCAGCCGTCGCGCTGCTGGTGGTGCTGGGCCTG AGGCGGGCGGGGGTCGAGGG
Downstream 100 bases:
>100_bases GACGATGGTTGGCGGATCTGCTTACCAGCCCTCAGCGGCATCTTCATTTAAGTAGAACAGTGGACTTACGGAGGTACATC CCATGAAGAAGCGTTCGCTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 243; Mature: 243
Protein sequence:
>243_residues MRWRDLTLVDLPCGGRLVIACDAAGGIGPKERDVIRVAGYVIGRFTARVALMDLLAAGAQPLHLVNNTCVEPDPTGREIL QGICDEAALAGLSADQINGSFEKNIPTVQTGLGVTAIGYLAPGRSLRTARPGDLVVAIGRPKVGAEVRLDDPELPDLPLV RRLAGDPLVHDLLPVGSRGIRAEAEDLAASAGLEVEWAPAEAGFPLGKSAGPVTCLLVAAAPSALQGLALTLTQPWAVVA QLR
Sequences:
>Translated_243_residues MRWRDLTLVDLPCGGRLVIACDAAGGIGPKERDVIRVAGYVIGRFTARVALMDLLAAGAQPLHLVNNTCVEPDPTGREIL QGICDEAALAGLSADQINGSFEKNIPTVQTGLGVTAIGYLAPGRSLRTARPGDLVVAIGRPKVGAEVRLDDPELPDLPLV RRLAGDPLVHDLLPVGSRGIRAEAEDLAASAGLEVEWAPAEAGFPLGKSAGPVTCLLVAAAPSALQGLALTLTQPWAVVA QLR >Mature_243_residues MRWRDLTLVDLPCGGRLVIACDAAGGIGPKERDVIRVAGYVIGRFTARVALMDLLAAGAQPLHLVNNTCVEPDPTGREIL QGICDEAALAGLSADQINGSFEKNIPTVQTGLGVTAIGYLAPGRSLRTARPGDLVVAIGRPKVGAEVRLDDPELPDLPLV RRLAGDPLVHDLLPVGSRGIRAEAEDLAASAGLEVEWAPAEAGFPLGKSAGPVTCLLVAAAPSALQGLALTLTQPWAVVA QLR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25218; Mature: 25218
Theoretical pI: Translated: 4.90; Mature: 4.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRWRDLTLVDLPCGGRLVIACDAAGGIGPKERDVIRVAGYVIGRFTARVALMDLLAAGAQ CCCCCEEEEECCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC PLHLVNNTCVEPDPTGREILQGICDEAALAGLSADQINGSFEKNIPTVQTGLGVTAIGYL CEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHCCCCHHCCCCEEHHCCCEEEEEEE APGRSLRTARPGDLVVAIGRPKVGAEVRLDDPELPDLPLVRRLAGDPLVHDLLPVGSRGI CCCCCCCCCCCCCEEEEECCCCCCCEEEECCCCCCCHHHHHHHCCCCHHHHHHCCCCCCC RAEAEDLAASAGLEVEWAPAEAGFPLGKSAGPVTCLLVAAAPSALQGLALTLTQPWAVVA CCCHHHHHHHCCCEEEECCCCCCCCCCCCCCCEEEEEEECCCHHHCCEEEEECCCCEEEE QLR ECC >Mature Secondary Structure MRWRDLTLVDLPCGGRLVIACDAAGGIGPKERDVIRVAGYVIGRFTARVALMDLLAAGAQ CCCCCEEEEECCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC PLHLVNNTCVEPDPTGREILQGICDEAALAGLSADQINGSFEKNIPTVQTGLGVTAIGYL CEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHCCCCHHCCCCEEHHCCCEEEEEEE APGRSLRTARPGDLVVAIGRPKVGAEVRLDDPELPDLPLVRRLAGDPLVHDLLPVGSRGI CCCCCCCCCCCCCEEEEECCCCCCCEEEECCCCCCCHHHHHHHCCCCHHHHHHCCCCCCC RAEAEDLAASAGLEVEWAPAEAGFPLGKSAGPVTCLLVAAAPSALQGLALTLTQPWAVVA CCCHHHHHHHCCCEEEECCCCCCCCCCCCCCCEEEEEEECCCHHHCCEEEEECCCCEEEE QLR ECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA