| Definition | Symbiobacterium thermophilum IAM 14863 chromosome, complete genome. |
|---|---|
| Accession | NC_006177 |
| Length | 3,566,135 |
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The map label for this gene is 51893033
Identifier: 51893033
GI number: 51893033
Start: 2037964
End: 2038377
Strand: Reverse
Name: 51893033
Synonym: STH1895
Alternate gene names: NA
Gene position: 2038377-2037964 (Counterclockwise)
Preceding gene: 51893034
Following gene: 51893029
Centisome position: 57.16
GC content: 75.12
Gene sequence:
>414_bases ATGGGCAAGACGGTGGTGGGCCTGTTCCGGCACAGCGGCGACGCCGACCTGGCGGCGGCCCACCTGCGGGACGCATTCGC GTTGGACGCGGACAGGCTGAACGTGATCGGCGAGGCTGACCTGGGCGCCATGAGCGGCGCCCGGATCAGCGACACCGACG CGTGGCTGCTGGCCGCCTTTGCCGACGTCGGCATGGAGGTTGGCCTGGACGCCGGTTCGGACCCCGGCCTGGACCTGGCG GGCAGCCGCGCTCCGGTGTTCCGCCGCTGGGGCGACCAGGTCCGCCGGGGCCGCACCCTGGTCGTGGCCCGCGCCGACGA CCCCGATGAGGCGGTCGCGATCGCCGGCGAGATGCGCCGGGCGGGCGCGGACCGGGTGGACCTGATCGGGGAGGAGAACT GGCCGGCGCGCTAG
Upstream 100 bases:
>100_bases GCAGGAGGGCCGCTGAGGCGCACGCCTGGGCCGCCTTTCCGCCCGACGGGGCATGAACGCGCCCGCTCCCCGGCCACACT AGGGCCGAGGAGGCGATGGC
Downstream 100 bases:
>100_bases CGATCCGCAGGCGACTTCGCCTTGTCGATCTTCTCTCGAACCTCATCGGAGGCGACCCGGGTCACCTCGGTGGTGATGGA CTGGGTCGCCTTCCTGAATT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 137; Mature: 136
Protein sequence:
>137_residues MGKTVVGLFRHSGDADLAAAHLRDAFALDADRLNVIGEADLGAMSGARISDTDAWLLAAFADVGMEVGLDAGSDPGLDLA GSRAPVFRRWGDQVRRGRTLVVARADDPDEAVAIAGEMRRAGADRVDLIGEENWPAR
Sequences:
>Translated_137_residues MGKTVVGLFRHSGDADLAAAHLRDAFALDADRLNVIGEADLGAMSGARISDTDAWLLAAFADVGMEVGLDAGSDPGLDLA GSRAPVFRRWGDQVRRGRTLVVARADDPDEAVAIAGEMRRAGADRVDLIGEENWPAR >Mature_136_residues GKTVVGLFRHSGDADLAAAHLRDAFALDADRLNVIGEADLGAMSGARISDTDAWLLAAFADVGMEVGLDAGSDPGLDLAG SRAPVFRRWGDQVRRGRTLVVARADDPDEAVAIAGEMRRAGADRVDLIGEENWPAR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14469; Mature: 14338
Theoretical pI: Translated: 4.44; Mature: 4.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGKTVVGLFRHSGDADLAAAHLRDAFALDADRLNVIGEADLGAMSGARISDTDAWLLAAF CCCEEEEEEECCCCCHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCEECCCHHHHHHHH ADVGMEVGLDAGSDPGLDLAGSRAPVFRRWGDQVRRGRTLVVARADDPDEAVAIAGEMRR HHCCCEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHH AGADRVDLIGEENWPAR CCCCCEEECCCCCCCCC >Mature Secondary Structure GKTVVGLFRHSGDADLAAAHLRDAFALDADRLNVIGEADLGAMSGARISDTDAWLLAAF CCEEEEEEECCCCCHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCEECCCHHHHHHHH ADVGMEVGLDAGSDPGLDLAGSRAPVFRRWGDQVRRGRTLVVARADDPDEAVAIAGEMRR HHCCCEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHH AGADRVDLIGEENWPAR CCCCCEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA