| Definition | Symbiobacterium thermophilum IAM 14863 chromosome, complete genome. |
|---|---|
| Accession | NC_006177 |
| Length | 3,566,135 |
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Identifier: 51893029
GI number:
Start: 2034951
End: 2035934
Strand: Reverse
Name: Not Available
Synonym: STH1891
Alternate gene names: NA
Gene position: NA
Preceding gene: 51893033
Following gene: 51893026
Centisome position: NA
GC content: NA
Gene sequence:
>984_bases ATGCGGTTCGTGGTGGACCCCTCGGCCAGGGGGCTGCGCCTGAGCCAGTACCTGTTCGACCGGCTGAAGCTCTCCCGTAC CGTGGTGCGGAGGGCGAAGACCAGCGGCGGCATCCTGGTGGACGGGCGGCCCGCCCGCACCAGCCTCGTCCTCGCCGGCG GCGAGGTGGTGGAGGTCCGGGTGGCGCAGGAAGGGCGCGTCGAGCCCGAGCCGATCCCGATTCAGGTGGTGTACGAGGAC CCCTGGCTGCTGGTGGTGGACAAGCCCGCCGGCATGGTGGTCCACCCGGTGCGGGACTACGTCTCCGGCACCCTGGCCAA CGCGGTGGCCCATCACCTGCTCCGTTCCGGCTCCGATCCCGTGGCCCGGCCGGTGCAGCGCATCGACCGGGAGACCTCGG GCCTGGTGCTCTTTGCCAAGGATCCCGCCGTCGCGGGGCTGCTGGCCCGGGAGCTGGAGCGGCAGAAGCTGGAGCGGCGG TACGTCGCGGTGGTCGAGGGCGCCGTGGCGGCTGACGCGGGCACCGTGGACCGGCCGATCCGGCGGGTCTGGGGCCATCC CGTCGCCCGGGAGGTGGCGGAAGGACCCCGCACGCCCGAGCAGGAGCGGCTGCTGGCGGAGGCGGCCGCGCAGGGCCGGG CGCTGCGGGAGGACTGGACGGCCGCGGGCCAGCCGGCCGTCACCCACTGGCGGGTGCTGCGCCGCTGGCCCGCGGCCACG ATGCTGGAACTCCGGCTGGAGACGGGGCGGACCCACCAGATCCGGGTACACATGGCCTACCTCGGCCACCCGCTGCTGGG CGATGAGCTCTACGGCGGAAGCCGGACGCTCATCCAGCGCCAGGCGCTGCACGCGGCCACCCTCGCGTTCGTCCACCCCG TGACGCGCGAGCCGGTGCGGTTCACGGCGCCGCTGCCCGCGGACCTGGAGGACCTGGTGGCGCGGCTGGACCGCACCGCC CCGAACGGCTCAGGAGCGTGTTAG
Upstream 100 bases:
>100_bases GTCGGCCTTGTCGCAAGGTAAAGAATTGGACACCGCCCTGCCCGCTCCCTGTCGGGGGCGGGCGGGAGCGGCGGAAAATC GTCACTGCGGAGGTGCGCGC
Downstream 100 bases:
>100_bases TCCGCGATGGCCGTGTACCGCCCGCGGAAGTAGCCCAGCGGCTTGCGGGTGCGGCTGCCGGGGTTCAGCCGCTCCACCTG CCCGATGAGGATGGTGTGGT
Product: 23S rRNA pseudouridine synthase
Products: NA
Alternate protein names: NA
Number of amino acids: NA
Protein sequence:
>327_residues MRFVVDPSARGLRLSQYLFDRLKLSRTVVRRAKTSGGILVDGRPARTSLVLAGGEVVEVRVAQEGRVEPEPIPIQVVYED PWLLVVDKPAGMVVHPVRDYVSGTLANAVAHHLLRSGSDPVARPVQRIDRETSGLVLFAKDPAVAGLLARELERQKLERR YVAVVEGAVAADAGTVDRPIRRVWGHPVAREVAEGPRTPEQERLLAEAAAQGRALREDWTAAGQPAVTHWRVLRRWPAAT MLELRLETGRTHQIRVHMAYLGHPLLGDELYGGSRTLIQRQALHAATLAFVHPVTREPVRFTAPLPADLEDLVARLDRTA PNGSGAC
Sequences:
NA
Specific function: NA
COG id: COG0564
COG function: function code J; Pseudouridylate synthases, 23S RNA-specific
Gene ontology:
Cell location: NA
Metaboloic importance: NA
Operon status: NA
Operon components: NA
Similarity: NA
Homologues:
NA
Paralogues:
NA
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: NA
Theoretical pI: NA
Prosite motif: NA
Important sites: NA
Signals:
NA
Transmembrane regions:
NA
Cys/Met content:
NA
Secondary structure: NA
PDB accession: NA
Resolution: NA
Structure class: NA
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: NA
TargetDB status: NA
Availability: NA
References: NA