Definition Symbiobacterium thermophilum IAM 14863 chromosome, complete genome.
Accession NC_006177
Length 3,566,135

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Identifier: 51893029

GI number:

Start: 2034951

End: 2035934

Strand: Reverse

Name: Not Available

Synonym: STH1891

Alternate gene names: NA

Gene position: NA

Preceding gene: 51893033

Following gene: 51893026

Centisome position: NA

GC content: NA

Gene sequence:

>984_bases
ATGCGGTTCGTGGTGGACCCCTCGGCCAGGGGGCTGCGCCTGAGCCAGTACCTGTTCGACCGGCTGAAGCTCTCCCGTAC
CGTGGTGCGGAGGGCGAAGACCAGCGGCGGCATCCTGGTGGACGGGCGGCCCGCCCGCACCAGCCTCGTCCTCGCCGGCG
GCGAGGTGGTGGAGGTCCGGGTGGCGCAGGAAGGGCGCGTCGAGCCCGAGCCGATCCCGATTCAGGTGGTGTACGAGGAC
CCCTGGCTGCTGGTGGTGGACAAGCCCGCCGGCATGGTGGTCCACCCGGTGCGGGACTACGTCTCCGGCACCCTGGCCAA
CGCGGTGGCCCATCACCTGCTCCGTTCCGGCTCCGATCCCGTGGCCCGGCCGGTGCAGCGCATCGACCGGGAGACCTCGG
GCCTGGTGCTCTTTGCCAAGGATCCCGCCGTCGCGGGGCTGCTGGCCCGGGAGCTGGAGCGGCAGAAGCTGGAGCGGCGG
TACGTCGCGGTGGTCGAGGGCGCCGTGGCGGCTGACGCGGGCACCGTGGACCGGCCGATCCGGCGGGTCTGGGGCCATCC
CGTCGCCCGGGAGGTGGCGGAAGGACCCCGCACGCCCGAGCAGGAGCGGCTGCTGGCGGAGGCGGCCGCGCAGGGCCGGG
CGCTGCGGGAGGACTGGACGGCCGCGGGCCAGCCGGCCGTCACCCACTGGCGGGTGCTGCGCCGCTGGCCCGCGGCCACG
ATGCTGGAACTCCGGCTGGAGACGGGGCGGACCCACCAGATCCGGGTACACATGGCCTACCTCGGCCACCCGCTGCTGGG
CGATGAGCTCTACGGCGGAAGCCGGACGCTCATCCAGCGCCAGGCGCTGCACGCGGCCACCCTCGCGTTCGTCCACCCCG
TGACGCGCGAGCCGGTGCGGTTCACGGCGCCGCTGCCCGCGGACCTGGAGGACCTGGTGGCGCGGCTGGACCGCACCGCC
CCGAACGGCTCAGGAGCGTGTTAG

Upstream 100 bases:

>100_bases
GTCGGCCTTGTCGCAAGGTAAAGAATTGGACACCGCCCTGCCCGCTCCCTGTCGGGGGCGGGCGGGAGCGGCGGAAAATC
GTCACTGCGGAGGTGCGCGC

Downstream 100 bases:

>100_bases
TCCGCGATGGCCGTGTACCGCCCGCGGAAGTAGCCCAGCGGCTTGCGGGTGCGGCTGCCGGGGTTCAGCCGCTCCACCTG
CCCGATGAGGATGGTGTGGT

Product: 23S rRNA pseudouridine synthase

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>327_residues
MRFVVDPSARGLRLSQYLFDRLKLSRTVVRRAKTSGGILVDGRPARTSLVLAGGEVVEVRVAQEGRVEPEPIPIQVVYED
PWLLVVDKPAGMVVHPVRDYVSGTLANAVAHHLLRSGSDPVARPVQRIDRETSGLVLFAKDPAVAGLLARELERQKLERR
YVAVVEGAVAADAGTVDRPIRRVWGHPVAREVAEGPRTPEQERLLAEAAAQGRALREDWTAAGQPAVTHWRVLRRWPAAT
MLELRLETGRTHQIRVHMAYLGHPLLGDELYGGSRTLIQRQALHAATLAFVHPVTREPVRFTAPLPADLEDLVARLDRTA
PNGSGAC

Sequences:
NA

Specific function: NA

COG id: COG0564

COG function: function code J; Pseudouridylate synthases, 23S RNA-specific

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA