Definition Symbiobacterium thermophilum IAM 14863 chromosome, complete genome.
Accession NC_006177
Length 3,566,135

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The map label for this gene is 51893033

Identifier: 51893033

GI number: 51893033

Start: 2037964

End: 2038377

Strand: Reverse

Name: 51893033

Synonym: STH1895

Alternate gene names: NA

Gene position: 2038377-2037964 (Counterclockwise)

Preceding gene: 51893034

Following gene: 51893029

Centisome position: 57.16

GC content: 75.12

Gene sequence:

>414_bases
ATGGGCAAGACGGTGGTGGGCCTGTTCCGGCACAGCGGCGACGCCGACCTGGCGGCGGCCCACCTGCGGGACGCATTCGC
GTTGGACGCGGACAGGCTGAACGTGATCGGCGAGGCTGACCTGGGCGCCATGAGCGGCGCCCGGATCAGCGACACCGACG
CGTGGCTGCTGGCCGCCTTTGCCGACGTCGGCATGGAGGTTGGCCTGGACGCCGGTTCGGACCCCGGCCTGGACCTGGCG
GGCAGCCGCGCTCCGGTGTTCCGCCGCTGGGGCGACCAGGTCCGCCGGGGCCGCACCCTGGTCGTGGCCCGCGCCGACGA
CCCCGATGAGGCGGTCGCGATCGCCGGCGAGATGCGCCGGGCGGGCGCGGACCGGGTGGACCTGATCGGGGAGGAGAACT
GGCCGGCGCGCTAG

Upstream 100 bases:

>100_bases
GCAGGAGGGCCGCTGAGGCGCACGCCTGGGCCGCCTTTCCGCCCGACGGGGCATGAACGCGCCCGCTCCCCGGCCACACT
AGGGCCGAGGAGGCGATGGC

Downstream 100 bases:

>100_bases
CGATCCGCAGGCGACTTCGCCTTGTCGATCTTCTCTCGAACCTCATCGGAGGCGACCCGGGTCACCTCGGTGGTGATGGA
CTGGGTCGCCTTCCTGAATT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 137; Mature: 136

Protein sequence:

>137_residues
MGKTVVGLFRHSGDADLAAAHLRDAFALDADRLNVIGEADLGAMSGARISDTDAWLLAAFADVGMEVGLDAGSDPGLDLA
GSRAPVFRRWGDQVRRGRTLVVARADDPDEAVAIAGEMRRAGADRVDLIGEENWPAR

Sequences:

>Translated_137_residues
MGKTVVGLFRHSGDADLAAAHLRDAFALDADRLNVIGEADLGAMSGARISDTDAWLLAAFADVGMEVGLDAGSDPGLDLA
GSRAPVFRRWGDQVRRGRTLVVARADDPDEAVAIAGEMRRAGADRVDLIGEENWPAR
>Mature_136_residues
GKTVVGLFRHSGDADLAAAHLRDAFALDADRLNVIGEADLGAMSGARISDTDAWLLAAFADVGMEVGLDAGSDPGLDLAG
SRAPVFRRWGDQVRRGRTLVVARADDPDEAVAIAGEMRRAGADRVDLIGEENWPAR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14469; Mature: 14338

Theoretical pI: Translated: 4.44; Mature: 4.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGKTVVGLFRHSGDADLAAAHLRDAFALDADRLNVIGEADLGAMSGARISDTDAWLLAAF
CCCEEEEEEECCCCCHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCEECCCHHHHHHHH
ADVGMEVGLDAGSDPGLDLAGSRAPVFRRWGDQVRRGRTLVVARADDPDEAVAIAGEMRR
HHCCCEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHH
AGADRVDLIGEENWPAR
CCCCCEEECCCCCCCCC
>Mature Secondary Structure 
GKTVVGLFRHSGDADLAAAHLRDAFALDADRLNVIGEADLGAMSGARISDTDAWLLAAF
CCEEEEEEECCCCCHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCEECCCHHHHHHHH
ADVGMEVGLDAGSDPGLDLAGSRAPVFRRWGDQVRRGRTLVVARADDPDEAVAIAGEMRR
HHCCCEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHH
AGADRVDLIGEENWPAR
CCCCCEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA