| Definition | Symbiobacterium thermophilum IAM 14863 chromosome, complete genome. |
|---|---|
| Accession | NC_006177 |
| Length | 3,566,135 |
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The map label for this gene is adcA [H]
Identifier: 51893019
GI number: 51893019
Start: 2021940
End: 2022926
Strand: Reverse
Name: adcA [H]
Synonym: STH1881
Alternate gene names: 51893019
Gene position: 2022926-2021940 (Counterclockwise)
Preceding gene: 51893020
Following gene: 51893018
Centisome position: 56.73
GC content: 70.82
Gene sequence:
>987_bases GTGGCAGCGGTCACGGCGCTGCTGTTGCTGGCGGGCTGTGCGACGGCCGACGGCGCCCGCAGGGGGGCCTCCGGCTTCGC GGAGGACGGAAGGCTGCGGGTGGTCGCCAGCATCTATCCGATATACGAGTTTGCGCGGGCGGTGGGCGGAGACCGGATCG AACTGGTCAACCTGGTCCCGCCGGGCACCGAGCCCCACGACTGGGAACCGTCGGTGGGTGACATCCGCACCCTGAACGGC GCACAGGTCTTCCTGTACGCGGGCGCGGGCTTCGAGCACTGGATCGACAAGGCGCTCGCCTCGCTGGACAACCGCGACCT GATCGCCGTGGAGACCAGCGCCGGGTTCGCCCTTCTGGGGGGGAACCCGAGCCACGGTGACGAAAGCGCGCACGACGACC ACGATGAAGGCCTGCACGGGGATCACCAGGAGGGGGCGGACGAGGGCCACCATCACGGTGGCCTGGATCCCCACATCTGG CTGGATCCGACCGGCGCCGCCCACATCGTGGAGCGGATCCGCGACGGGCTGGCCGCCGCCGACCCGGGCAACGCGGACGT GTACCGCACAAGCGCTGCGGCGTACCTGAAGGAGCTGGAGGCGCTGGACCGGGAGTATGCCGCAGGTCTCGCCCAGTGCG AGCGGCGGACCTTCTTCACCACCCACGCCGCCTTCGGCTACCTGGCCCGCCGCTACGGCCTGGAACAGCGGGCCATCATG GGGCTGGCCCCGGACGCCGAACCGACCCCGCGGGCCCTGAAGGCGGTCGTGGACGCGGCCCGGGAGCAGGATGTCCGGTA CATCTTCTTCGAGACGCTGGTGAGCGACAGGGTCGCCCGCGTGGTGGCGGACGAGATCGGCGCCGAGACGCTGGTGCTCA ACCCCTTCGAGGGGCTGACGCCGGAGCAGGTCGCCGCCGGGGAGGACTACCTGTCGGTCATGCGGGAGAACCTCGCCAAC CTGCGCATTGCACTGGGGTGCCGGTGA
Upstream 100 bases:
>100_bases AAGCCAGGGCCAAGTGCAGAATGCCGCAGTGGGGGCGCAGAAGATCCGGTATTCATCGCTGGAGGAGGGCTGCACGAGGA TGCGCCGACTGAGAGGGTTC
Downstream 100 bases:
>100_bases TGGTTGCGACGAGTCCGGTCATCGAGGTGCGGAACGTCAGCTTCGGTTACGGTAAGGATCTGGTGCTGGACCGTGTCAGC CTGACGGTGGGGCGCGGGGA
Product: ABC transporter substrate-binding protein
Products: Zn (II) [Cytoplasm]; ADP; phosphate [C]
Alternate protein names: NA
Number of amino acids: Translated: 328; Mature: 327
Protein sequence:
>328_residues MAAVTALLLLAGCATADGARRGASGFAEDGRLRVVASIYPIYEFARAVGGDRIELVNLVPPGTEPHDWEPSVGDIRTLNG AQVFLYAGAGFEHWIDKALASLDNRDLIAVETSAGFALLGGNPSHGDESAHDDHDEGLHGDHQEGADEGHHHGGLDPHIW LDPTGAAHIVERIRDGLAAADPGNADVYRTSAAAYLKELEALDREYAAGLAQCERRTFFTTHAAFGYLARRYGLEQRAIM GLAPDAEPTPRALKAVVDAAREQDVRYIFFETLVSDRVARVVADEIGAETLVLNPFEGLTPEQVAAGEDYLSVMRENLAN LRIALGCR
Sequences:
>Translated_328_residues MAAVTALLLLAGCATADGARRGASGFAEDGRLRVVASIYPIYEFARAVGGDRIELVNLVPPGTEPHDWEPSVGDIRTLNG AQVFLYAGAGFEHWIDKALASLDNRDLIAVETSAGFALLGGNPSHGDESAHDDHDEGLHGDHQEGADEGHHHGGLDPHIW LDPTGAAHIVERIRDGLAAADPGNADVYRTSAAAYLKELEALDREYAAGLAQCERRTFFTTHAAFGYLARRYGLEQRAIM GLAPDAEPTPRALKAVVDAAREQDVRYIFFETLVSDRVARVVADEIGAETLVLNPFEGLTPEQVAAGEDYLSVMRENLAN LRIALGCR >Mature_327_residues AAVTALLLLAGCATADGARRGASGFAEDGRLRVVASIYPIYEFARAVGGDRIELVNLVPPGTEPHDWEPSVGDIRTLNGA QVFLYAGAGFEHWIDKALASLDNRDLIAVETSAGFALLGGNPSHGDESAHDDHDEGLHGDHQEGADEGHHHGGLDPHIWL DPTGAAHIVERIRDGLAAADPGNADVYRTSAAAYLKELEALDREYAAGLAQCERRTFFTTHAAFGYLARRYGLEQRAIMG LAPDAEPTPRALKAVVDAAREQDVRYIFFETLVSDRVARVVADEIGAETLVLNPFEGLTPEQVAAGEDYLSVMRENLANL RIALGCR
Specific function: Part of the ATP-driven transport system AdcABC for zinc [H]
COG id: COG0803
COG function: function code P; ABC-type metal ion transport system, periplasmic component/surface adhesin
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein 9 family [H]
Homologues:
Organism=Escherichia coli, GI87081990, Length=267, Percent_Identity=25.4681647940075, Blast_Score=79, Evalue=5e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006127 - InterPro: IPR006129 - InterPro: IPR012674 - InterPro: IPR011038 - InterPro: IPR006128 - InterPro: IPR015304 [H]
Pfam domain/function: PF01297 SBP_bac_9; PF09223 YodA [H]
EC number: NA
Molecular weight: Translated: 35259; Mature: 35127
Theoretical pI: Translated: 4.58; Mature: 4.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAAVTALLLLAGCATADGARRGASGFAEDGRLRVVASIYPIYEFARAVGGDRIELVNLVP CHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHCCCCEEEEEECC PGTEPHDWEPSVGDIRTLNGAQVFLYAGAGFEHWIDKALASLDNRDLIAVETSAGFALLG CCCCCCCCCCCCCCEEECCCCEEEEEECCCHHHHHHHHHHHCCCCCEEEEECCCCEEEEC GNPSHGDESAHDDHDEGLHGDHQEGADEGHHHGGLDPHIWLDPTGAAHIVERIRDGLAAA CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHCCCCC DPGNADVYRTSAAAYLKELEALDREYAAGLAQCERRTFFTTHAAFGYLARRYGLEQRAIM CCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHC GLAPDAEPTPRALKAVVDAAREQDVRYIFFETLVSDRVARVVADEIGAETLVLNPFEGLT CCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCC PEQVAAGEDYLSVMRENLANLRIALGCR HHHHHCCHHHHHHHHHHHHHEEEEECCC >Mature Secondary Structure AAVTALLLLAGCATADGARRGASGFAEDGRLRVVASIYPIYEFARAVGGDRIELVNLVP HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHCCCCEEEEEECC PGTEPHDWEPSVGDIRTLNGAQVFLYAGAGFEHWIDKALASLDNRDLIAVETSAGFALLG CCCCCCCCCCCCCCEEECCCCEEEEEECCCHHHHHHHHHHHCCCCCEEEEECCCCEEEEC GNPSHGDESAHDDHDEGLHGDHQEGADEGHHHGGLDPHIWLDPTGAAHIVERIRDGLAAA CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHCCCCC DPGNADVYRTSAAAYLKELEALDREYAAGLAQCERRTFFTTHAAFGYLARRYGLEQRAIM CCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHC GLAPDAEPTPRALKAVVDAAREQDVRYIFFETLVSDRVARVVADEIGAETLVLNPFEGLT CCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCC PEQVAAGEDYLSVMRENLANLRIALGCR HHHHHCCHHHHHHHHHHHHHEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Zn (II) [Periplasm]; H2O; ATP [C]
Specific reaction: Zn (II) [Periplasm] + H2O + ATP = Zn (II) [Cytoplasm] + ADP + phosphate [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11296296 [H]