Definition Symbiobacterium thermophilum IAM 14863 chromosome, complete genome.
Accession NC_006177
Length 3,566,135

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The map label for this gene is spoIIIAB [H]

Identifier: 51892999

GI number: 51892999

Start: 2001721

End: 2002242

Strand: Reverse

Name: spoIIIAB [H]

Synonym: STH1861

Alternate gene names: 51892999

Gene position: 2002242-2001721 (Counterclockwise)

Preceding gene: 51893000

Following gene: 51892998

Centisome position: 56.15

GC content: 75.29

Gene sequence:

>522_bases
ATGACGCTGAAGCTGCTCGGCGCGGCCCTCACCGTGCTGGCGCCGTCGTGGATCGGCTTCCAGATCGCCGCCCGGTATGC
CCGCCGGCCGGCGGAGCTCCGGGGCTTTCAGAACGGCCTGGCGGTGCTGGTCACCGAGGTGGAGTACGGCGCCACCCCGA
TGCCGGACGCCCTGCGCAGCGCGGCCAGGGCGTCGGGGCCGGTGGCCGGGGCGGTCCTGGCGGACGCCGCGGATCGGCTG
GAGGGCGGCGGGGGCATTACCCCCGGGGAGGCGCTGGCTGCGGCCCTGGAGGAGCGGCGGGGGGCGACCTGCCTGACGCC
GGCGGACCAGGAGATCCTGGCCGCCCTGGTCCCCGTGCTGGGGGCGTCGGACCGCCGGGACCAGGTGCGCCACCTGCGGC
TGGCCCTGGAAAGGCTGGCCGCGGCGGAGGCCGAGGCGACGGACGAGCGGCGGCGGTACGAGAAGATGTACCGGTACGTC
GGGGTTCTTTCGGGCCTGGCCCTGGTGCTGATTCTGATCTAG

Upstream 100 bases:

>100_bases
TGCTCAGGGCGGGCGCTTTCGAGCGGGCGGTGGTCCTCGGCCGCAGCCGCGGGCCCGGCACCGTGGAGGCGGTCCTGGAC
CTGGCGCGGGAGGTGGTGGC

Downstream 100 bases:

>100_bases
GTGGAGGGTGAGCCGGGTGGACGTGCAGCTCTTGTTCCGCATCGCCGGGGTCGGCATCATCGTGGCGGTCATGGCCACCG
TGCTGAAACAGGCCGGCAAG

Product: stage III sporulation protein SpoAB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 173; Mature: 172

Protein sequence:

>173_residues
MTLKLLGAALTVLAPSWIGFQIAARYARRPAELRGFQNGLAVLVTEVEYGATPMPDALRSAARASGPVAGAVLADAADRL
EGGGGITPGEALAAALEERRGATCLTPADQEILAALVPVLGASDRRDQVRHLRLALERLAAAEAEATDERRRYEKMYRYV
GVLSGLALVLILI

Sequences:

>Translated_173_residues
MTLKLLGAALTVLAPSWIGFQIAARYARRPAELRGFQNGLAVLVTEVEYGATPMPDALRSAARASGPVAGAVLADAADRL
EGGGGITPGEALAAALEERRGATCLTPADQEILAALVPVLGASDRRDQVRHLRLALERLAAAEAEATDERRRYEKMYRYV
GVLSGLALVLILI
>Mature_172_residues
TLKLLGAALTVLAPSWIGFQIAARYARRPAELRGFQNGLAVLVTEVEYGATPMPDALRSAARASGPVAGAVLADAADRLE
GGGGITPGEALAAALEERRGATCLTPADQEILAALVPVLGASDRRDQVRHLRLALERLAAAEAEATDERRRYEKMYRYVG
VLSGLALVLILI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014198 [H]

Pfam domain/function: PF09548 Spore_III_AB [H]

EC number: NA

Molecular weight: Translated: 18288; Mature: 18157

Theoretical pI: Translated: 7.36; Mature: 7.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLKLLGAALTVLAPSWIGFQIAARYARRPAELRGFQNGLAVLVTEVEYGATPMPDALRS
CCHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHCCHHEEEEHHHCCCCCCCHHHHH
AARASGPVAGAVLADAADRLEGGGGITPGEALAAALEERRGATCLTPADQEILAALVPVL
HHHCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH
GASDRRDQVRHLRLALERLAAAEAEATDERRRYEKMYRYVGVLSGLALVLILI
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure 
TLKLLGAALTVLAPSWIGFQIAARYARRPAELRGFQNGLAVLVTEVEYGATPMPDALRS
CHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHCCHHEEEEHHHCCCCCCCHHHHH
AARASGPVAGAVLADAADRLEGGGGITPGEALAAALEERRGATCLTPADQEILAALVPVL
HHHCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH
GASDRRDQVRHLRLALERLAAAEAEATDERRRYEKMYRYVGVLSGLALVLILI
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377; 1766372 [H]