| Definition | Symbiobacterium thermophilum IAM 14863 chromosome, complete genome. |
|---|---|
| Accession | NC_006177 |
| Length | 3,566,135 |
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The map label for this gene is spoIIIAB [H]
Identifier: 51892999
GI number: 51892999
Start: 2001721
End: 2002242
Strand: Reverse
Name: spoIIIAB [H]
Synonym: STH1861
Alternate gene names: 51892999
Gene position: 2002242-2001721 (Counterclockwise)
Preceding gene: 51893000
Following gene: 51892998
Centisome position: 56.15
GC content: 75.29
Gene sequence:
>522_bases ATGACGCTGAAGCTGCTCGGCGCGGCCCTCACCGTGCTGGCGCCGTCGTGGATCGGCTTCCAGATCGCCGCCCGGTATGC CCGCCGGCCGGCGGAGCTCCGGGGCTTTCAGAACGGCCTGGCGGTGCTGGTCACCGAGGTGGAGTACGGCGCCACCCCGA TGCCGGACGCCCTGCGCAGCGCGGCCAGGGCGTCGGGGCCGGTGGCCGGGGCGGTCCTGGCGGACGCCGCGGATCGGCTG GAGGGCGGCGGGGGCATTACCCCCGGGGAGGCGCTGGCTGCGGCCCTGGAGGAGCGGCGGGGGGCGACCTGCCTGACGCC GGCGGACCAGGAGATCCTGGCCGCCCTGGTCCCCGTGCTGGGGGCGTCGGACCGCCGGGACCAGGTGCGCCACCTGCGGC TGGCCCTGGAAAGGCTGGCCGCGGCGGAGGCCGAGGCGACGGACGAGCGGCGGCGGTACGAGAAGATGTACCGGTACGTC GGGGTTCTTTCGGGCCTGGCCCTGGTGCTGATTCTGATCTAG
Upstream 100 bases:
>100_bases TGCTCAGGGCGGGCGCTTTCGAGCGGGCGGTGGTCCTCGGCCGCAGCCGCGGGCCCGGCACCGTGGAGGCGGTCCTGGAC CTGGCGCGGGAGGTGGTGGC
Downstream 100 bases:
>100_bases GTGGAGGGTGAGCCGGGTGGACGTGCAGCTCTTGTTCCGCATCGCCGGGGTCGGCATCATCGTGGCGGTCATGGCCACCG TGCTGAAACAGGCCGGCAAG
Product: stage III sporulation protein SpoAB
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 173; Mature: 172
Protein sequence:
>173_residues MTLKLLGAALTVLAPSWIGFQIAARYARRPAELRGFQNGLAVLVTEVEYGATPMPDALRSAARASGPVAGAVLADAADRL EGGGGITPGEALAAALEERRGATCLTPADQEILAALVPVLGASDRRDQVRHLRLALERLAAAEAEATDERRRYEKMYRYV GVLSGLALVLILI
Sequences:
>Translated_173_residues MTLKLLGAALTVLAPSWIGFQIAARYARRPAELRGFQNGLAVLVTEVEYGATPMPDALRSAARASGPVAGAVLADAADRL EGGGGITPGEALAAALEERRGATCLTPADQEILAALVPVLGASDRRDQVRHLRLALERLAAAEAEATDERRRYEKMYRYV GVLSGLALVLILI >Mature_172_residues TLKLLGAALTVLAPSWIGFQIAARYARRPAELRGFQNGLAVLVTEVEYGATPMPDALRSAARASGPVAGAVLADAADRLE GGGGITPGEALAAALEERRGATCLTPADQEILAALVPVLGASDRRDQVRHLRLALERLAAAEAEATDERRRYEKMYRYVG VLSGLALVLILI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014198 [H]
Pfam domain/function: PF09548 Spore_III_AB [H]
EC number: NA
Molecular weight: Translated: 18288; Mature: 18157
Theoretical pI: Translated: 7.36; Mature: 7.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLKLLGAALTVLAPSWIGFQIAARYARRPAELRGFQNGLAVLVTEVEYGATPMPDALRS CCHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHCCHHEEEEHHHCCCCCCCHHHHH AARASGPVAGAVLADAADRLEGGGGITPGEALAAALEERRGATCLTPADQEILAALVPVL HHHCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH GASDRRDQVRHLRLALERLAAAEAEATDERRRYEKMYRYVGVLSGLALVLILI CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC >Mature Secondary Structure TLKLLGAALTVLAPSWIGFQIAARYARRPAELRGFQNGLAVLVTEVEYGATPMPDALRS CHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHCCHHEEEEHHHCCCCCCCHHHHH AARASGPVAGAVLADAADRLEGGGGITPGEALAAALEERRGATCLTPADQEILAALVPVL HHHCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH GASDRRDQVRHLRLALERLAAAEAEATDERRRYEKMYRYVGVLSGLALVLILI CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8969508; 9384377; 1766372 [H]