| Definition | Symbiobacterium thermophilum IAM 14863 chromosome, complete genome. |
|---|---|
| Accession | NC_006177 |
| Length | 3,566,135 |
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The map label for this gene is spoIIIAA [H]
Identifier: 51893000
GI number: 51893000
Start: 2002239
End: 2003117
Strand: Reverse
Name: spoIIIAA [H]
Synonym: STH1862
Alternate gene names: 51893000
Gene position: 2003117-2002239 (Counterclockwise)
Preceding gene: 51893001
Following gene: 51892999
Centisome position: 56.17
GC content: 75.31
Gene sequence:
>879_bases TTGCCCGCGCCGCCGGAGGAGATCCGCATCCGCCAGGGGCGGCCGCTGCACCTGGTCTACCCCGGCGGCGACGCCTTCGT GACCCCTGACGGCCGGCTGACGGCCGATCCCGCCCGGGCGGTCCGTCCGGACGGCGACGACCTGCAGCGCACCTTCCAGC TCATGGCCAAGGGGTCGGTCTACGCCTGGGAGGAGGAGGTGCGGGGCGGTTTCCTGACCCTGGAAGGGGGCCACCGGGTC GGCCTCTGCGGGCGGGCGGTGACTGAGGCGTGCCGCATCCGCACGCTGAAGCAGGTGGCCAGTCTGAACGTCCGCATCGC CCGGGAGGTGCCCGGGGCCGCCGACGGCCTGCTGCCCCACCTGGTGCGGGGCGGACGCTTTCTCTCGACGCTGTTGGTCT CACCGCCCCAGGCCGGCAAGACGACCCTGCTCCGGGACCTGGTGCGCCAGCTCTCCACCGGCGTGCCGCGCCTGGGGCTT CGGGGGCTCAAGGTGGGGCTGGTGGACGAGCGGTCGGAGGTCGCCGGATGCGTGTGCGGCGTTCCCCAGCGGGACGTGGG GCCCCGCACCGACGTGCTGGACGGCTGCCCCAAGGCCGAGGGGTTGATGCTCATGATCCGGGCCCTCTCGCCGCAGGTGG TCGCCGCCGACGAGATCGGCCGGCCGGAGGATGCGGTGGCGGTGATGGAGGCCCTGCACGCCGGGGTTGCCGTCCTGGCC ACGGCGCACGGGGCGGGCCTGTCGGACGTGCGCCGCCGGCCGGCCCTGGCGGAACTGCTCAGGGCGGGCGCTTTCGAGCG GGCGGTGGTCCTCGGCCGCAGCCGCGGGCCCGGCACCGTGGAGGCGGTCCTGGACCTGGCGCGGGAGGTGGTGGCATGA
Upstream 100 bases:
>100_bases GAGGGGGGGACGAGCGGTGGTGCCGGAGGAGTTCGAGAGGGAGATCCTGGCCCATGTCGCCCCGCGCCTCGCGGACCTGC TGCGCAGGGCCGTCCCGCTC
Downstream 100 bases:
>100_bases CGCTGAAGCTGCTCGGCGCGGCCCTCACCGTGCTGGCGCCGTCGTGGATCGGCTTCCAGATCGCCGCCCGGTATGCCCGC CGGCCGGCGGAGCTCCGGGG
Product: stage III sporulation protein AA
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 292; Mature: 291
Protein sequence:
>292_residues MPAPPEEIRIRQGRPLHLVYPGGDAFVTPDGRLTADPARAVRPDGDDLQRTFQLMAKGSVYAWEEEVRGGFLTLEGGHRV GLCGRAVTEACRIRTLKQVASLNVRIAREVPGAADGLLPHLVRGGRFLSTLLVSPPQAGKTTLLRDLVRQLSTGVPRLGL RGLKVGLVDERSEVAGCVCGVPQRDVGPRTDVLDGCPKAEGLMLMIRALSPQVVAADEIGRPEDAVAVMEALHAGVAVLA TAHGAGLSDVRRRPALAELLRAGAFERAVVLGRSRGPGTVEAVLDLAREVVA
Sequences:
>Translated_292_residues MPAPPEEIRIRQGRPLHLVYPGGDAFVTPDGRLTADPARAVRPDGDDLQRTFQLMAKGSVYAWEEEVRGGFLTLEGGHRV GLCGRAVTEACRIRTLKQVASLNVRIAREVPGAADGLLPHLVRGGRFLSTLLVSPPQAGKTTLLRDLVRQLSTGVPRLGL RGLKVGLVDERSEVAGCVCGVPQRDVGPRTDVLDGCPKAEGLMLMIRALSPQVVAADEIGRPEDAVAVMEALHAGVAVLA TAHGAGLSDVRRRPALAELLRAGAFERAVVLGRSRGPGTVEAVLDLAREVVA >Mature_291_residues PAPPEEIRIRQGRPLHLVYPGGDAFVTPDGRLTADPARAVRPDGDDLQRTFQLMAKGSVYAWEEEVRGGFLTLEGGHRVG LCGRAVTEACRIRTLKQVASLNVRIAREVPGAADGLLPHLVRGGRFLSTLLVSPPQAGKTTLLRDLVRQLSTGVPRLGLR GLKVGLVDERSEVAGCVCGVPQRDVGPRTDVLDGCPKAEGLMLMIRALSPQVVAADEIGRPEDAVAVMEALHAGVAVLAT AHGAGLSDVRRRPALAELLRAGAFERAVVLGRSRGPGTVEAVLDLAREVVA
Specific function: Unknown
COG id: COG3854
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003593 - InterPro: IPR014217 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30928; Mature: 30797
Theoretical pI: Translated: 8.78; Mature: 8.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPAPPEEIRIRQGRPLHLVYPGGDAFVTPDGRLTADPARAVRPDGDDLQRTFQLMAKGSV CCCCCCHHEECCCCEEEEEECCCCEEECCCCCEECCCHHCCCCCCHHHHHHHHHHHCCCC YAWEEEVRGGFLTLEGGHRVGLCGRAVTEACRIRTLKQVASLNVRIAREVPGAADGLLPH EEEHHHHCCCEEEECCCCEEEHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCHHHHHH LVRGGRFLSTLLVSPPQAGKTTLLRDLVRQLSTGVPRLGLRGLKVGLVDERSEVAGCVCG HHHCCHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCHHHHHHHHCC VPQRDVGPRTDVLDGCPKAEGLMLMIRALSPQVVAADEIGRPEDAVAVMEALHAGVAVLA CCCCCCCCCCHHHCCCCCCCCHHHHHHHCCCCEEEHHHCCCCHHHHHHHHHHHHHHHHHH TAHGAGLSDVRRRPALAELLRAGAFERAVVLGRSRGPGTVEAVLDLAREVVA HCCCCCHHHHHCCHHHHHHHHCCCHHHHHEEECCCCCHHHHHHHHHHHHHCC >Mature Secondary Structure PAPPEEIRIRQGRPLHLVYPGGDAFVTPDGRLTADPARAVRPDGDDLQRTFQLMAKGSV CCCCCHHEECCCCEEEEEECCCCEEECCCCCEECCCHHCCCCCCHHHHHHHHHHHCCCC YAWEEEVRGGFLTLEGGHRVGLCGRAVTEACRIRTLKQVASLNVRIAREVPGAADGLLPH EEEHHHHCCCEEEECCCCEEEHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCHHHHHH LVRGGRFLSTLLVSPPQAGKTTLLRDLVRQLSTGVPRLGLRGLKVGLVDERSEVAGCVCG HHHCCHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCHHHHHHHHCC VPQRDVGPRTDVLDGCPKAEGLMLMIRALSPQVVAADEIGRPEDAVAVMEALHAGVAVLA CCCCCCCCCCHHHCCCCCCCCHHHHHHHCCCCEEEHHHCCCCHHHHHHHHHHHHHHHHHH TAHGAGLSDVRRRPALAELLRAGAFERAVVLGRSRGPGTVEAVLDLAREVVA HCCCCCHHHHHCCHHHHHHHHCCCHHHHHEEECCCCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1766372; 8969508; 9384377 [H]