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The map label for this gene is nusB

Identifier: 51892987

GI number: 51892987

Start: 1994276

End: 1994737

Strand: Reverse

Name: nusB

Synonym: STH1849

Alternate gene names: 51892987

Gene position: 1994737-1994276 (Counterclockwise)

Preceding gene: 51892988

Following gene: 51892986

Centisome position: 55.94

GC content: 67.97

Gene sequence:

>462_bases
GTGAGCAGGAGAAAGGCGAGGGAACTGGCCCTTCAGGCGCTGTTTCAGATGGATATTGCCGGGACCGACCCCGACACTGC
GGTCGCCCAGGCGCTCACCCGGGAGACGGAGCCGGACTGGGCGCCTGACCGGCTGGAGGAGGAGTCGGCCGAGTTCGCGC
GCCGGCTGGTCCGGGGCGCCTGGCAGCACCGGGAGGAGAGCGACCGGCTGATTGCCCAGTACGCGCGCGGCTGGCGGGTG
GAGCGCATGGCCGCCGTGGACCGGGCGATTCTCCGGATGGCGGTCTATGAGATCGTACACAGCGAGGACGTGCCCGACAG
CGTGGCCGTCGCCGAGGCGGTGGAGCTCGCCAAGACCTTCTCCACCGCGGATTCGTCGCGCTTCGTCAACGGAATTCTCG
GTTCGGTCATTCGCGGAATGAAGGGTGCTGCCGGTGCAGACGAGGCTGTTTCTCGGGATTGA

Upstream 100 bases:

>100_bases
GATAGGCAAGCGCATGGACGAGGGGCCGGAATCGCTGGTGCAGATCTTCGAGCGTCTGCTGCCGCCGCGTCGGCGATGAC
CATGCAGGAGGAGACGGAAG

Downstream 100 bases:

>100_bases
TACCAGCTACTACACCTGTTCCGTGGCGCTGGTGGACGAGGACGGGCGGCTGCTGGAGGATCAGCGCCGCCTGATCTCCG
TGGCGGAAGGCGAACGGGGT

Product: transcription termination factor

Products: NA

Alternate protein names: Protein nusB

Number of amino acids: Translated: 153; Mature: 152

Protein sequence:

>153_residues
MSRRKARELALQALFQMDIAGTDPDTAVAQALTRETEPDWAPDRLEEESAEFARRLVRGAWQHREESDRLIAQYARGWRV
ERMAAVDRAILRMAVYEIVHSEDVPDSVAVAEAVELAKTFSTADSSRFVNGILGSVIRGMKGAAGADEAVSRD

Sequences:

>Translated_153_residues
MSRRKARELALQALFQMDIAGTDPDTAVAQALTRETEPDWAPDRLEEESAEFARRLVRGAWQHREESDRLIAQYARGWRV
ERMAAVDRAILRMAVYEIVHSEDVPDSVAVAEAVELAKTFSTADSSRFVNGILGSVIRGMKGAAGADEAVSRD
>Mature_152_residues
SRRKARELALQALFQMDIAGTDPDTAVAQALTRETEPDWAPDRLEEESAEFARRLVRGAWQHREESDRLIAQYARGWRVE
RMAAVDRAILRMAVYEIVHSEDVPDSVAVAEAVELAKTFSTADSSRFVNGILGSVIRGMKGAAGADEAVSRD

Specific function: Involved in the transcription termination process

COG id: COG0781

COG function: function code K; Transcription termination factor

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nusB family

Homologues:

Organism=Escherichia coli, GI1786618, Length=137, Percent_Identity=35.036496350365, Blast_Score=66, Evalue=8e-13,

Paralogues:

None

Copy number: 900 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): NUSB_SYMTH (Q67NA9)

Other databases:

- EMBL:   AP006840
- RefSeq:   YP_075678.1
- HSSP:   P95020
- ProteinModelPortal:   Q67NA9
- SMR:   Q67NA9
- GeneID:   2979410
- GenomeReviews:   AP006840_GR
- KEGG:   sth:STH1849
- NMPDR:   fig|292459.1.peg.1784
- HOGENOM:   HBG734409
- OMA:   FAYDYDK
- BioCyc:   STHE292459:STH1849-MONOMER
- HAMAP:   MF_00073
- InterPro:   IPR011605
- InterPro:   IPR006027
- Gene3D:   G3DSA:1.10.940.10
- TIGRFAMs:   TIGR01951

Pfam domain/function: PF01029 NusB; SSF48013 NusB_RsmB_TIM44

EC number: NA

Molecular weight: Translated: 16960; Mature: 16829

Theoretical pI: Translated: 4.78; Mature: 4.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRRKARELALQALFQMDIAGTDPDTAVAQALTRETEPDWAPDRLEEESAEFARRLVRGA
CCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH
WQHREESDRLIAQYARGWRVERMAAVDRAILRMAVYEIVHSEDVPDSVAVAEAVELAKTF
HHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
STADSSRFVNGILGSVIRGMKGAAGADEAVSRD
HHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCC
>Mature Secondary Structure 
SRRKARELALQALFQMDIAGTDPDTAVAQALTRETEPDWAPDRLEEESAEFARRLVRGA
CHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH
WQHREESDRLIAQYARGWRVERMAAVDRAILRMAVYEIVHSEDVPDSVAVAEAVELAKTF
HHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
STADSSRFVNGILGSVIRGMKGAAGADEAVSRD
HHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA