| Definition | Symbiobacterium thermophilum IAM 14863 chromosome, complete genome. |
|---|---|
| Accession | NC_006177 |
| Length | 3,566,135 |
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The map label for this gene is argR
Identifier: 51892974
GI number: 51892974
Start: 1983161
End: 1983613
Strand: Reverse
Name: argR
Synonym: STH1836
Alternate gene names: 51892974
Gene position: 1983613-1983161 (Counterclockwise)
Preceding gene: 51892975
Following gene: 51892973
Centisome position: 55.62
GC content: 69.09
Gene sequence:
>453_bases GTGGTGAAGGCACGACGACAGGCCAAGATTCTTGAGCTGGTTCGGACGCGGGTGATCGAGACCCAGGAGGAGCTGGCCGC TGCGCTGGCTGCGGAGGGCATCCCCGTCACCCAGGCGACGATTTCGCGGGACATCAAGGAACTGCAACTCACCAAAGTGC CGATGCCGGACGGGCGTTACCGGTACGCGCTGCCCGAGGAACCGGGCGCCGCGGCGGGGGAGCGCTGGCGCCGCATCTTC CGGGAGGCGGTGCTGACCATCGACCACAGCGGCAATCTGGTCGTCATCAAGTCGCTTCCCGGCACGGCGCAGGGCGTGGC TGCCGCCATCGACCACGCGGGCTGGCCGGAGATGATCGGCACGGTGGCGGGCGACGACACCGTGATCGTCGTGGTGAAGC CCGCGGACGCGACCGGCGAGGTGGCCGAGCGGCTGAAGGGGCTCATGCGTTGA
Upstream 100 bases:
>100_bases CGAATGAATATGCAGGGATTGCCGGGCGTTCCGCCGAATTGGCAGGGGAGATGGCCGCCGCTTCGGGCACGTGCGGTCCA ACTCCAGGGCGAGGTGACGC
Downstream 100 bases:
>100_bases CGGGGAGGGGCCTCGAGTGCTGGTCGAAATCGCGATCGAACAGTTCGCTCTCATAGACCAGGTGCGCCTCCAGTTCACGG AGGGCATGAACGTCCTCACC
Product: transcriptional regulator
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 150; Mature: 150
Protein sequence:
>150_residues MVKARRQAKILELVRTRVIETQEELAAALAAEGIPVTQATISRDIKELQLTKVPMPDGRYRYALPEEPGAAAGERWRRIF REAVLTIDHSGNLVVIKSLPGTAQGVAAAIDHAGWPEMIGTVAGDDTVIVVVKPADATGEVAERLKGLMR
Sequences:
>Translated_150_residues MVKARRQAKILELVRTRVIETQEELAAALAAEGIPVTQATISRDIKELQLTKVPMPDGRYRYALPEEPGAAAGERWRRIF REAVLTIDHSGNLVVIKSLPGTAQGVAAAIDHAGWPEMIGTVAGDDTVIVVVKPADATGEVAERLKGLMR >Mature_150_residues MVKARRQAKILELVRTRVIETQEELAAALAAEGIPVTQATISRDIKELQLTKVPMPDGRYRYALPEEPGAAAGERWRRIF REAVLTIDHSGNLVVIKSLPGTAQGVAAAIDHAGWPEMIGTVAGDDTVIVVVKPADATGEVAERLKGLMR
Specific function: Regulates arginine biosynthesis genes
COG id: COG1438
COG function: function code K; Arginine repressor
Gene ontology:
Cell location: Cytoplasm (Probable)
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ArgR family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): ARGR_SYMTH (Q67NC2)
Other databases:
- EMBL: AP006840 - RefSeq: YP_075665.1 - ProteinModelPortal: Q67NC2 - SMR: Q67NC2 - GeneID: 2981941 - GenomeReviews: AP006840_GR - KEGG: sth:STH1836 - NMPDR: fig|292459.1.peg.1771 - HOGENOM: HBG697909 - OMA: ICEDANT - BioCyc: STHE292459:STH1836-MONOMER - GO: GO:0005737 - HAMAP: MF_00173 - InterPro: IPR001669 - InterPro: IPR020899 - InterPro: IPR020900 - InterPro: IPR011991 - Gene3D: G3DSA:3.30.1360.40 - Gene3D: G3DSA:1.10.10.10 - PRINTS: PR01467 - ProDom: PD007402 - TIGRFAMs: TIGR01529
Pfam domain/function: PF01316 Arg_repressor; PF02863 Arg_repressor_C; SSF55252 Arg_repress
EC number: NA
Molecular weight: Translated: 16217; Mature: 16217
Theoretical pI: Translated: 7.69; Mature: 7.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVKARRQAKILELVRTRVIETQEELAAALAAEGIPVTQATISRDIKELQLTKVPMPDGRY CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCE RYALPEEPGAAAGERWRRIFREAVLTIDHSGNLVVIKSLPGTAQGVAAAIDHAGWPEMIG EEECCCCCCCCHHHHHHHHHHHHHEEEECCCCEEEEECCCCCHHHHHHHHHCCCCHHHHH TVAGDDTVIVVVKPADATGEVAERLKGLMR HCCCCCEEEEEEECCCCCHHHHHHHHHHCC >Mature Secondary Structure MVKARRQAKILELVRTRVIETQEELAAALAAEGIPVTQATISRDIKELQLTKVPMPDGRY CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCE RYALPEEPGAAAGERWRRIFREAVLTIDHSGNLVVIKSLPGTAQGVAAAIDHAGWPEMIG EEECCCCCCCCHHHHHHHHHHHHHEEEECCCCEEEEECCCCCHHHHHHHHHCCCCHHHHH TVAGDDTVIVVVKPADATGEVAERLKGLMR HCCCCCEEEEEEECCCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA