Definition Symbiobacterium thermophilum IAM 14863 chromosome, complete genome.
Accession NC_006177
Length 3,566,135

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The map label for this gene is 51892934

Identifier: 51892934

GI number: 51892934

Start: 1939440

End: 1940201

Strand: Reverse

Name: 51892934

Synonym: STH1796

Alternate gene names: NA

Gene position: 1940201-1939440 (Counterclockwise)

Preceding gene: 51892935

Following gene: 51892933

Centisome position: 54.41

GC content: 75.33

Gene sequence:

>762_bases
ATGACGGAGCAGGAGTGGCAGCAGCATCCGGAGCGCGAGGTGCCGGCGCTTCCGGGGCAGGAACCGCACTTCCCGGGCGG
CGACCCCGGCGGGCGGCCGCAGGGGATCCACCCGGGCCGGTCGGAGGGGCAGGCGGCGCTCTCGTCAGGGGACTCCGTTC
CGGTGCTTGTGGCGTGGTTCGCCGACGCGTCCAGCGCCCGGGCCTGTCTCCGCGCCCTGGAGCTGCGCGGCGTGGGGGTG
ACGCTGGCGGAGGAGGCGCCGCCTGGGCACACGGGGCCTGTGGCGATCCATGCCAGTCCTTCGGTCGGCGAGAAGGACCC
CGTCATGACCGAACGGGGGATGGGGCGCGGGGCCGTGCTCGGCGCCACGGTGGGCGCGACGGCGGGGTTCCTGGCTGCCA
CCTACCTGGTGCCGCCGCTGGGCGCCGCCTCGGCCACCGGCGCCATGCTGACCACACTGGCCGGCGCCGGGTTGGGCAGC
TTCTTCGGCAACCTGGCCGACCAGGCCAGGGATGACAGCGGGAACCCGGCGGGCCAGGGAGGCGATGCCGCAGCGGCCCA
GGAGAGTGCGACCCTGCGGTTCCGTCTGGAGGTCTCCGCGCGCCCAACCCAGGTTGACGAGGTGATGGCGCTGGTGTCCG
CTTGGGATCCGGAGGAGATGCGGCTGCTGCCCACAGGCGCGGGGGAGGCGCGGGGGTATCCGGCCGGGCGCCGGGGAGAT
GGGGACGGCGGTCGGATCCCCGTGGAGGGCGGGCCGGCATAG

Upstream 100 bases:

>100_bases
GAGGAGGGGCGGCTGCGGGACCCGGTGGTGGTCGGGTTTTCGGCCGAGCCGCCGGAGGCGGCGGTGATCCCGTAAGAGAC
GCAGCGAGGAGGAAAGTCGG

Downstream 100 bases:

>100_bases
TGGCCAGAACCGAGAGGCGGTGGGTACGGGTCGGCGGGCGGGAGCTGGCGGTGACCAACCTGGAGAAGCCCATGTGGCCG
GCCGACGGGCTGACCAAGGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 253; Mature: 252

Protein sequence:

>253_residues
MTEQEWQQHPEREVPALPGQEPHFPGGDPGGRPQGIHPGRSEGQAALSSGDSVPVLVAWFADASSARACLRALELRGVGV
TLAEEAPPGHTGPVAIHASPSVGEKDPVMTERGMGRGAVLGATVGATAGFLAATYLVPPLGAASATGAMLTTLAGAGLGS
FFGNLADQARDDSGNPAGQGGDAAAAQESATLRFRLEVSARPTQVDEVMALVSAWDPEEMRLLPTGAGEARGYPAGRRGD
GDGGRIPVEGGPA

Sequences:

>Translated_253_residues
MTEQEWQQHPEREVPALPGQEPHFPGGDPGGRPQGIHPGRSEGQAALSSGDSVPVLVAWFADASSARACLRALELRGVGV
TLAEEAPPGHTGPVAIHASPSVGEKDPVMTERGMGRGAVLGATVGATAGFLAATYLVPPLGAASATGAMLTTLAGAGLGS
FFGNLADQARDDSGNPAGQGGDAAAAQESATLRFRLEVSARPTQVDEVMALVSAWDPEEMRLLPTGAGEARGYPAGRRGD
GDGGRIPVEGGPA
>Mature_252_residues
TEQEWQQHPEREVPALPGQEPHFPGGDPGGRPQGIHPGRSEGQAALSSGDSVPVLVAWFADASSARACLRALELRGVGVT
LAEEAPPGHTGPVAIHASPSVGEKDPVMTERGMGRGAVLGATVGATAGFLAATYLVPPLGAASATGAMLTTLAGAGLGSF
FGNLADQARDDSGNPAGQGGDAAAAQESATLRFRLEVSARPTQVDEVMALVSAWDPEEMRLLPTGAGEARGYPAGRRGDG
DGGRIPVEGGPA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25541; Mature: 25409

Theoretical pI: Translated: 4.55; Mature: 4.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTEQEWQQHPEREVPALPGQEPHFPGGDPGGRPQGIHPGRSEGQAALSSGDSVPVLVAWF
CCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCEEEEEE
ADASSARACLRALELRGVGVTLAEEAPPGHTGPVAIHASPSVGEKDPVMTERGMGRGAVL
CCCHHHHHHHHHHHHCCCCEEEECCCCCCCCCCEEEECCCCCCCCCCCHHHCCCCCCEEE
GATVGATAGFLAATYLVPPLGAASATGAMLTTLAGAGLGSFFGNLADQARDDSGNPAGQG
EHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCC
GDAAAAQESATLRFRLEVSARPTQVDEVMALVSAWDPEEMRLLPTGAGEARGYPAGRRGD
CCCHHHCCCCEEEEEEEECCCCCHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCC
GDGGRIPVEGGPA
CCCCEECCCCCCC
>Mature Secondary Structure 
TEQEWQQHPEREVPALPGQEPHFPGGDPGGRPQGIHPGRSEGQAALSSGDSVPVLVAWF
CCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCEEEEEE
ADASSARACLRALELRGVGVTLAEEAPPGHTGPVAIHASPSVGEKDPVMTERGMGRGAVL
CCCHHHHHHHHHHHHCCCCEEEECCCCCCCCCCEEEECCCCCCCCCCCHHHCCCCCCEEE
GATVGATAGFLAATYLVPPLGAASATGAMLTTLAGAGLGSFFGNLADQARDDSGNPAGQG
EHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCC
GDAAAAQESATLRFRLEVSARPTQVDEVMALVSAWDPEEMRLLPTGAGEARGYPAGRRGD
CCCHHHCCCCEEEEEEEECCCCCHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCC
GDGGRIPVEGGPA
CCCCEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA