The gene/protein map for NC_006177 is currently unavailable.
Definition Symbiobacterium thermophilum IAM 14863 chromosome, complete genome.
Accession NC_006177
Length 3,566,135

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The map label for this gene is 51892894

Identifier: 51892894

GI number: 51892894

Start: 1900640

End: 1901743

Strand: Reverse

Name: 51892894

Synonym: STH1756

Alternate gene names: NA

Gene position: 1901743-1900640 (Counterclockwise)

Preceding gene: 51892895

Following gene: 51892893

Centisome position: 53.33

GC content: 71.74

Gene sequence:

>1104_bases
ATGCGTCGCTTTTTCGTTGTGCTGCTGATGCTGATCCTGATCCCGACGGCCGTACCCGGCACGGCCCTGGCCGAGGAGCC
GGTGCGGCTGTTCGTCAACGGTTCGCAGGTTGTCCCGGACGTGGCGCCGGTCATCGTGTCCGACCGCACGCTGGTGCCCG
TCCGCTTCCTGGCCGAGCCGCTGGGGTTCGCCGTGGAGTGGGACGGGGCGACGGGAACGGTGACGCTCTCCGGAGCCCGG
GTGATCCGCCTCGCCGTCGGCCGGCCCGAGGCCATCGTGGACGGAACCGTGGTCGCCCTGGACGTGGCGCCGGTCAACGT
CGACGGCCGGGTCATGGTCCCGTTGCGCTTCGTGGCCGAACAGATGGGCGCCGCGGTGGAGTGGGATCCGCAGAACCGGG
TGGTGACCGTTACCGCCGCCCGGATCCTGCCGGAGGGCCAGGTGGGCGGTGACCTGGCCCTTGTGGGGAACGTGGAGGCC
CTGGGCGCGTGGGCCGAGGGGCACACGACGGGTCAGTTCAGGCTCTCCGCCGTCGCGGGCGTGCTGAGCATGGACTACAC
CTTTGCGCTGGATGGTTATCGGGAGGGCGACGACCTGCTCGTCTACCTGACCGGCGCGGGCCCGGGGCTGGACTACCGGT
CGGCCCTTGCCGTGCGCGCCGGCAAGGTCTGGCGGCTCGGCCCGGGCGGCACGTGGGTGCGGCGGCCGGAGGAGGATGCG
GCGTTCGGTCCGGACGGCCTGCCCGGGTGGGGAGGGGATCTCCCGGCCGAGGGCGGCCTCTTCGACCCCGACACCACGGA
ACTGGCCGGCGCCCGGATCCTCCGGGAGGAGAGGACGCTGGAAGGCGTGACCTACGACGTGGTCGTGGTCGAGTGGGATC
AGGCGGCACTCTCGCCGCTGTTCGCGGAGTTTCCGCCGACGGTCGGGGACGCGTCGCTGCTCCTCACCGTGTACGCCCTA
CCGGACACCGGGGGGCCTGTGCGGGTCGACCTGAGCATGCACGCCGCAGACGCCACCGGGGTGACGGTGGACCTCAGCGG
ATCCCTGGCCGTGAAGCCGCTGGAAGGCGCGATCCCGTTCCCGCCGGAGATTCTGTCCGAATGA

Upstream 100 bases:

>100_bases
TCAGCTGCAGGCCAAGGCGAAGGAGAACCGATAGGAATCGCGGCGCAGGCGGCGAATACCCCTTCCTTGCCAAGTTGCGT
ACGAATGAGGGGGACTCCGC

Downstream 100 bases:

>100_bases
CGGGCGCGAAGCCGCCCCCCGATGGATGCGGGGGGCGGCTTTCGGTGTGCCCGGCATGGGCGCTGACTTGGCGGTGAAAG
TCCGCTACGGGCGAGGCAGC

Product: hypothetical protein

Products: NA

Alternate protein names: Copper Amine Oxidase Domain-Containing Protein; Copper Amine Oxidase-Like Protein; N-Acetylmuramoyl-L-Alanine Amidase; Copper Amine Oxidase N- Domain Family; Cell Wall Hydrolase/Autolysin; Copper Amine Oxidase-Like; Copper Amine Oxidase N- Domain Protein; SCP-Like Extracellular Protease; Peptidyl-Prolyl Cis-Trans Isomerase Cyclophilin-Type; SpoIID/LytB Domain Protein; Peptidase; Copper Amine Oxidase N-Terminal Domain Family; Minor Extracellular Protease; Glycosyl Hydrolase; Protease; Amylopullulanase; D-Alanyl-D-Alanine Carboxypeptidase-Like Protein; Papain Family Cysteine Protease; D-Alanyl-D-Alanine Carboxypeptidase; Secreted Protein

Number of amino acids: Translated: 367; Mature: 367

Protein sequence:

>367_residues
MRRFFVVLLMLILIPTAVPGTALAEEPVRLFVNGSQVVPDVAPVIVSDRTLVPVRFLAEPLGFAVEWDGATGTVTLSGAR
VIRLAVGRPEAIVDGTVVALDVAPVNVDGRVMVPLRFVAEQMGAAVEWDPQNRVVTVTAARILPEGQVGGDLALVGNVEA
LGAWAEGHTTGQFRLSAVAGVLSMDYTFALDGYREGDDLLVYLTGAGPGLDYRSALAVRAGKVWRLGPGGTWVRRPEEDA
AFGPDGLPGWGGDLPAEGGLFDPDTTELAGARILREERTLEGVTYDVVVVEWDQAALSPLFAEFPPTVGDASLLLTVYAL
PDTGGPVRVDLSMHAADATGVTVDLSGSLAVKPLEGAIPFPPEILSE

Sequences:

>Translated_367_residues
MRRFFVVLLMLILIPTAVPGTALAEEPVRLFVNGSQVVPDVAPVIVSDRTLVPVRFLAEPLGFAVEWDGATGTVTLSGAR
VIRLAVGRPEAIVDGTVVALDVAPVNVDGRVMVPLRFVAEQMGAAVEWDPQNRVVTVTAARILPEGQVGGDLALVGNVEA
LGAWAEGHTTGQFRLSAVAGVLSMDYTFALDGYREGDDLLVYLTGAGPGLDYRSALAVRAGKVWRLGPGGTWVRRPEEDA
AFGPDGLPGWGGDLPAEGGLFDPDTTELAGARILREERTLEGVTYDVVVVEWDQAALSPLFAEFPPTVGDASLLLTVYAL
PDTGGPVRVDLSMHAADATGVTVDLSGSLAVKPLEGAIPFPPEILSE
>Mature_367_residues
MRRFFVVLLMLILIPTAVPGTALAEEPVRLFVNGSQVVPDVAPVIVSDRTLVPVRFLAEPLGFAVEWDGATGTVTLSGAR
VIRLAVGRPEAIVDGTVVALDVAPVNVDGRVMVPLRFVAEQMGAAVEWDPQNRVVTVTAARILPEGQVGGDLALVGNVEA
LGAWAEGHTTGQFRLSAVAGVLSMDYTFALDGYREGDDLLVYLTGAGPGLDYRSALAVRAGKVWRLGPGGTWVRRPEEDA
AFGPDGLPGWGGDLPAEGGLFDPDTTELAGARILREERTLEGVTYDVVVVEWDQAALSPLFAEFPPTVGDASLLLTVYAL
PDTGGPVRVDLSMHAADATGVTVDLSGSLAVKPLEGAIPFPPEILSE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38580; Mature: 38580

Theoretical pI: Translated: 4.11; Mature: 4.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRFFVVLLMLILIPTAVPGTALAEEPVRLFVNGSQVVPDVAPVIVSDRTLVPVRFLAEP
CHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCCCCEEECCCEEEHHHHHHHH
LGFAVEWDGATGTVTLSGARVIRLAVGRPEAIVDGTVVALDVAPVNVDGRVMVPLRFVAE
CCEEEEECCCCEEEEECCCEEEEEECCCCCEEECCEEEEEEEEEECCCCEEEEHHHHHHH
QMGAAVEWDPQNRVVTVTAARILPEGQVGGDLALVGNVEALGAWAEGHTTGQFRLSAVAG
HHCCEEEECCCCCEEEEEEEEECCCCCCCCCEEEEECHHHEEEECCCCCCCEEEEEHHHH
VLSMDYTFALDGYREGDDLLVYLTGAGPGLDYRSALAVRAGKVWRLGPGGTWVRRPEEDA
HHHCCEEEEECCCCCCCCEEEEEECCCCCCCHHHHHEEECCCEEEECCCCCCCCCCCCCC
AFGPDGLPGWGGDLPAEGGLFDPDTTELAGARILREERTLEGVTYDVVVVEWDQAALSPL
CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEEEECHHHHHHH
FAEFPPTVGDASLLLTVYALPDTGGPVRVDLSMHAADATGVTVDLSGSLAVKPLEGAIPF
HHHCCCCCCCCEEEEEEEECCCCCCCEEEEEEEEECCCCCEEEEECCCEEEEECCCCCCC
PPEILSE
CHHHHCC
>Mature Secondary Structure
MRRFFVVLLMLILIPTAVPGTALAEEPVRLFVNGSQVVPDVAPVIVSDRTLVPVRFLAEP
CHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCCCCEEECCCEEEHHHHHHHH
LGFAVEWDGATGTVTLSGARVIRLAVGRPEAIVDGTVVALDVAPVNVDGRVMVPLRFVAE
CCEEEEECCCCEEEEECCCEEEEEECCCCCEEECCEEEEEEEEEECCCCEEEEHHHHHHH
QMGAAVEWDPQNRVVTVTAARILPEGQVGGDLALVGNVEALGAWAEGHTTGQFRLSAVAG
HHCCEEEECCCCCEEEEEEEEECCCCCCCCCEEEEECHHHEEEECCCCCCCEEEEEHHHH
VLSMDYTFALDGYREGDDLLVYLTGAGPGLDYRSALAVRAGKVWRLGPGGTWVRRPEEDA
HHHCCEEEEECCCCCCCCEEEEEECCCCCCCHHHHHEEECCCEEEECCCCCCCCCCCCCC
AFGPDGLPGWGGDLPAEGGLFDPDTTELAGARILREERTLEGVTYDVVVVEWDQAALSPL
CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEEEECHHHHHHH
FAEFPPTVGDASLLLTVYALPDTGGPVRVDLSMHAADATGVTVDLSGSLAVKPLEGAIPF
HHHCCCCCCCCEEEEEEEECCCCCCCEEEEEEEEECCCCCEEEEECCCEEEEECCCCCCC
PPEILSE
CHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA