Definition Symbiobacterium thermophilum IAM 14863 chromosome, complete genome.
Accession NC_006177
Length 3,566,135

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The map label for this gene is 51892887

Identifier: 51892887

GI number: 51892887

Start: 1895410

End: 1895877

Strand: Reverse

Name: 51892887

Synonym: STH1749

Alternate gene names: NA

Gene position: 1895877-1895410 (Counterclockwise)

Preceding gene: 51892889

Following gene: 51892886

Centisome position: 53.16

GC content: 60.26

Gene sequence:

>468_bases
GTGTTTACCTGGTGGCAATGGCTTCTCATCATATTGGCAGCGCTCGGCTTAGGCTTTCTGATCCTATGGCAGACGCCCTG
GTTCAAGGTCCGCAAGTATGCGATTGACGTCAAGCGGATCTACGACAAGCACAAGCTCCAGGAGAAAGCCGAGCAGGCGC
AGGCCCTCGGCCAGAACCCCAACGTGAACCCGGTGCTCCTGCGCAAGCCGCTGCGGGACATCATCTCCACCTATGAGGCC
ATCATCGCGGACATGAACAAGCTGAAGGTCCCGCCGAAGGCGCAGAAGCTGCATGAGATGTCCCTCACCGCCGCCAAGGA
GTCGCTGGCCATGTACCAGATGGCCGCGGTCGGCGGCTTCCGGCAGAAGGCGATCCTGAGCCGGCAGAAGAAGGTGATGC
AGCTTCAGGAGCAGATCGAGGCGGAGATGGAGAAGCTGTACGGCAAGCCCAAGCAGCCCAGGAAGTAG

Upstream 100 bases:

>100_bases
TACGCCGGAAGAAGTGCGTCAACGGAAAGGCTTGCCTCAGGGTAGGAGACATGCCACAATGTGACGGTGGGGATTTTTCC
TGGAGGAGTGAACAGTTGCT

Downstream 100 bases:

>100_bases
AGAGCCTGACGGGCGGCGCCTCCGGCTGGGAAGGCGCCGCCGCAGTGTCACCGGCGGCTTCCGGGGCTCCGAGGCGGAGG
TGAGAGCTTGGCCCGGATTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 155; Mature: 155

Protein sequence:

>155_residues
MFTWWQWLLIILAALGLGFLILWQTPWFKVRKYAIDVKRIYDKHKLQEKAEQAQALGQNPNVNPVLLRKPLRDIISTYEA
IIADMNKLKVPPKAQKLHEMSLTAAKESLAMYQMAAVGGFRQKAILSRQKKVMQLQEQIEAEMEKLYGKPKQPRK

Sequences:

>Translated_155_residues
MFTWWQWLLIILAALGLGFLILWQTPWFKVRKYAIDVKRIYDKHKLQEKAEQAQALGQNPNVNPVLLRKPLRDIISTYEA
IIADMNKLKVPPKAQKLHEMSLTAAKESLAMYQMAAVGGFRQKAILSRQKKVMQLQEQIEAEMEKLYGKPKQPRK
>Mature_155_residues
MFTWWQWLLIILAALGLGFLILWQTPWFKVRKYAIDVKRIYDKHKLQEKAEQAQALGQNPNVNPVLLRKPLRDIISTYEA
IIADMNKLKVPPKAQKLHEMSLTAAKESLAMYQMAAVGGFRQKAILSRQKKVMQLQEQIEAEMEKLYGKPKQPRK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18046; Mature: 18046

Theoretical pI: Translated: 10.66; Mature: 10.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFTWWQWLLIILAALGLGFLILWQTPWFKVRKYAIDVKRIYDKHKLQEKAEQAQALGQNP
CCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
NVNPVLLRKPLRDIISTYEAIIADMNKLKVPPKAQKLHEMSLTAAKESLAMYQMAAVGGF
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCH
RQKAILSRQKKVMQLQEQIEAEMEKLYGKPKQPRK
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MFTWWQWLLIILAALGLGFLILWQTPWFKVRKYAIDVKRIYDKHKLQEKAEQAQALGQNP
CCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
NVNPVLLRKPLRDIISTYEAIIADMNKLKVPPKAQKLHEMSLTAAKESLAMYQMAAVGGF
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCH
RQKAILSRQKKVMQLQEQIEAEMEKLYGKPKQPRK
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA