| Definition | Symbiobacterium thermophilum IAM 14863 chromosome, complete genome. |
|---|---|
| Accession | NC_006177 |
| Length | 3,566,135 |
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The map label for this gene is 51892887
Identifier: 51892887
GI number: 51892887
Start: 1895410
End: 1895877
Strand: Reverse
Name: 51892887
Synonym: STH1749
Alternate gene names: NA
Gene position: 1895877-1895410 (Counterclockwise)
Preceding gene: 51892889
Following gene: 51892886
Centisome position: 53.16
GC content: 60.26
Gene sequence:
>468_bases GTGTTTACCTGGTGGCAATGGCTTCTCATCATATTGGCAGCGCTCGGCTTAGGCTTTCTGATCCTATGGCAGACGCCCTG GTTCAAGGTCCGCAAGTATGCGATTGACGTCAAGCGGATCTACGACAAGCACAAGCTCCAGGAGAAAGCCGAGCAGGCGC AGGCCCTCGGCCAGAACCCCAACGTGAACCCGGTGCTCCTGCGCAAGCCGCTGCGGGACATCATCTCCACCTATGAGGCC ATCATCGCGGACATGAACAAGCTGAAGGTCCCGCCGAAGGCGCAGAAGCTGCATGAGATGTCCCTCACCGCCGCCAAGGA GTCGCTGGCCATGTACCAGATGGCCGCGGTCGGCGGCTTCCGGCAGAAGGCGATCCTGAGCCGGCAGAAGAAGGTGATGC AGCTTCAGGAGCAGATCGAGGCGGAGATGGAGAAGCTGTACGGCAAGCCCAAGCAGCCCAGGAAGTAG
Upstream 100 bases:
>100_bases TACGCCGGAAGAAGTGCGTCAACGGAAAGGCTTGCCTCAGGGTAGGAGACATGCCACAATGTGACGGTGGGGATTTTTCC TGGAGGAGTGAACAGTTGCT
Downstream 100 bases:
>100_bases AGAGCCTGACGGGCGGCGCCTCCGGCTGGGAAGGCGCCGCCGCAGTGTCACCGGCGGCTTCCGGGGCTCCGAGGCGGAGG TGAGAGCTTGGCCCGGATTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 155; Mature: 155
Protein sequence:
>155_residues MFTWWQWLLIILAALGLGFLILWQTPWFKVRKYAIDVKRIYDKHKLQEKAEQAQALGQNPNVNPVLLRKPLRDIISTYEA IIADMNKLKVPPKAQKLHEMSLTAAKESLAMYQMAAVGGFRQKAILSRQKKVMQLQEQIEAEMEKLYGKPKQPRK
Sequences:
>Translated_155_residues MFTWWQWLLIILAALGLGFLILWQTPWFKVRKYAIDVKRIYDKHKLQEKAEQAQALGQNPNVNPVLLRKPLRDIISTYEA IIADMNKLKVPPKAQKLHEMSLTAAKESLAMYQMAAVGGFRQKAILSRQKKVMQLQEQIEAEMEKLYGKPKQPRK >Mature_155_residues MFTWWQWLLIILAALGLGFLILWQTPWFKVRKYAIDVKRIYDKHKLQEKAEQAQALGQNPNVNPVLLRKPLRDIISTYEA IIADMNKLKVPPKAQKLHEMSLTAAKESLAMYQMAAVGGFRQKAILSRQKKVMQLQEQIEAEMEKLYGKPKQPRK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18046; Mature: 18046
Theoretical pI: Translated: 10.66; Mature: 10.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFTWWQWLLIILAALGLGFLILWQTPWFKVRKYAIDVKRIYDKHKLQEKAEQAQALGQNP CCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC NVNPVLLRKPLRDIISTYEAIIADMNKLKVPPKAQKLHEMSLTAAKESLAMYQMAAVGGF CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCH RQKAILSRQKKVMQLQEQIEAEMEKLYGKPKQPRK HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MFTWWQWLLIILAALGLGFLILWQTPWFKVRKYAIDVKRIYDKHKLQEKAEQAQALGQNP CCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC NVNPVLLRKPLRDIISTYEAIIADMNKLKVPPKAQKLHEMSLTAAKESLAMYQMAAVGGF CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCH RQKAILSRQKKVMQLQEQIEAEMEKLYGKPKQPRK HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA