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The map label for this gene is yicL [C]

Identifier: 51892889

GI number: 51892889

Start: 1896403

End: 1897383

Strand: Reverse

Name: yicL [C]

Synonym: STH1751

Alternate gene names: 51892889

Gene position: 1897383-1896403 (Counterclockwise)

Preceding gene: 51892890

Following gene: 51892887

Centisome position: 53.21

GC content: 71.05

Gene sequence:

>981_bases
ATGGAGCGGACACGGGGGCGGCAAACGCTGGGGTACATGATGGTCTTCGGGGCGGCGTCACTGTGGGGGACCCTGGGGGT
CGTAAGCCGGAACCTGTACGTCGGCGGCCTCTCGGCACAGGCCGTCGTCACCCTGCGGGCGTCGATGGCCGCCGCCCTCC
TCCTGGCGGCCCTGACGGTGCTCCGCCCGGCCACCCTCCGGGTCCGGCTGCGCGACATCCCGCTGTTTGCGGCCTACGGG
CTGGTCAGCGTCGCCGCTTTCTACCTGCTGTACTTCCTCACCATCCAGCACCTGTCGGTGGCCGCCGCGGCGGTGCTCAT
GTACACGGCCCCCGCCTTCGTGGCGGTGGCTGCCGCCCTTACCCTGGGCGAACCGTTGACCCAGGGCAAGTTGCTGGCCC
TGACGCTGACGATGGCCGGCTGTGCCCTCGTCGCCCGGGCCTATGAGCCGTCGGTCTTCCGGGGACAGCTCATCGGCGTG
CTCACCGGCCTCGGGTCCGGGTTCACCTACGGCATGTACTCCATCTTCGGCAAGCACGCCCTGAAGCGGTACAACCCGTG
GACGGTGCAGGCGTACTCACTGCTGTTCGGCGCCGCGCCGCTGGTTCTCTTCTTCGGGCGCGAGGCCGTCCGGTCGCTGG
CCCGTTCGCCGGAGGCGCTGCCCTGGCTCGCCTACCTGGCGCTGGTGACCACGCTCGGGGCGTACGGGCTCTACCTGAGC
GGGCTGCAAGTGGTGGAGGCGAGCCACGCCGCCCTCCTCTCCACGGTGGAGCCGGTGGTGGCGGCGCTGCTCGGGTTCTG
GATCCTGGAGGAGTCGCTTCGGTTGCCCCAGGTGATCGGGATCCTGTTGGTCCTGGGCAGCGCGGTGATCCTCAACGCAC
AGCGGGGGGAGCCTGCCGGGGCGGCGAGTCGGCAGGCGGGCGTGCCTCCGGCGGGAGTCGGTACGGAATGTGCTCGCCGC
ACCCCAGGGGGCGCCCCGTGA

Upstream 100 bases:

>100_bases
TGCCGCTGAGCCGGCGTCAGACCATAACGAGGAGACGCCCGGGCCGGGCGCACCGACACGCCCGGGCGCGGGCCTGCGCG
ACCGGGGGGGCAGCGGCAGG

Downstream 100 bases:

>100_bases
GCGCCGGGATGACGGTGCCGTGGCAGACGACGATCACGTGGCCGTCGTCTTCATCATACCGGCTGAGCACGGCCAGGACC
CGGCGGCGCACCTGTGAGAG

Product: putative transporter protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 326; Mature: 326

Protein sequence:

>326_residues
MERTRGRQTLGYMMVFGAASLWGTLGVVSRNLYVGGLSAQAVVTLRASMAAALLLAALTVLRPATLRVRLRDIPLFAAYG
LVSVAAFYLLYFLTIQHLSVAAAAVLMYTAPAFVAVAAALTLGEPLTQGKLLALTLTMAGCALVARAYEPSVFRGQLIGV
LTGLGSGFTYGMYSIFGKHALKRYNPWTVQAYSLLFGAAPLVLFFGREAVRSLARSPEALPWLAYLALVTTLGAYGLYLS
GLQVVEASHAALLSTVEPVVAALLGFWILEESLRLPQVIGILLVLGSAVILNAQRGEPAGAASRQAGVPPAGVGTECARR
TPGGAP

Sequences:

>Translated_326_residues
MERTRGRQTLGYMMVFGAASLWGTLGVVSRNLYVGGLSAQAVVTLRASMAAALLLAALTVLRPATLRVRLRDIPLFAAYG
LVSVAAFYLLYFLTIQHLSVAAAAVLMYTAPAFVAVAAALTLGEPLTQGKLLALTLTMAGCALVARAYEPSVFRGQLIGV
LTGLGSGFTYGMYSIFGKHALKRYNPWTVQAYSLLFGAAPLVLFFGREAVRSLARSPEALPWLAYLALVTTLGAYGLYLS
GLQVVEASHAALLSTVEPVVAALLGFWILEESLRLPQVIGILLVLGSAVILNAQRGEPAGAASRQAGVPPAGVGTECARR
TPGGAP
>Mature_326_residues
MERTRGRQTLGYMMVFGAASLWGTLGVVSRNLYVGGLSAQAVVTLRASMAAALLLAALTVLRPATLRVRLRDIPLFAAYG
LVSVAAFYLLYFLTIQHLSVAAAAVLMYTAPAFVAVAAALTLGEPLTQGKLLALTLTMAGCALVARAYEPSVFRGQLIGV
LTGLGSGFTYGMYSIFGKHALKRYNPWTVQAYSLLFGAAPLVLFFGREAVRSLARSPEALPWLAYLALVTTLGAYGLYLS
GLQVVEASHAALLSTVEPVVAALLGFWILEESLRLPQVIGILLVLGSAVILNAQRGEPAGAASRQAGVPPAGVGTECARR
TPGGAP

Specific function: Unknown

COG id: COG0697

COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 DUF6 domains [H]

Homologues:

Organism=Escherichia coli, GI1790092, Length=306, Percent_Identity=24.5098039215686, Blast_Score=67, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004779
- InterPro:   IPR000620 [H]

Pfam domain/function: PF00892 DUF6 [H]

EC number: NA

Molecular weight: Translated: 34197; Mature: 34197

Theoretical pI: Translated: 10.15; Mature: 10.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCCCCCCCCCCCCCCHHHHCCCCCCC
>Mature Secondary Structure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CCCCCCCCCCCCCCCHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9389475 [H]