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The map label for this gene is 51892882

Identifier: 51892882

GI number: 51892882

Start: 1890398

End: 1890862

Strand: Reverse

Name: 51892882

Synonym: STH1744

Alternate gene names: NA

Gene position: 1890862-1890398 (Counterclockwise)

Preceding gene: 51892884

Following gene: 51892881

Centisome position: 53.02

GC content: 67.1

Gene sequence:

>465_bases
ATGGTACGTGCACGTCCGCCATCCGAGATCGAACACATGCGGTCGCGGATCGCCAGCCGACTGCGCGTGCTGGAGGAACT
GCTGAATACGCAGATGGAGGAGTACTTCTCCAGTCCGGGCAGCGAAGGGCTCGCGTACAGCGTCCGGCCGCACCTGCGCC
GCTACGTGGAGGTGGCCGGCCAGCTCCTGGAGCGGATGGGCGGGCCGGACGGCGATCCTGTGGACGACGTCGTGTTCATG
GACGTGCCCGTCACGCTGGTGGATGAGACTGACGGCACCGAGGAGGTCTATACCGTGGTCCTCCCGGAAGAGGGCGACCC
GGCGAAGGGGCACATCTCCTGTCTGTCGCCGCTGGGGCTGGCGCTTCTGCTGAAGCGGGTGAACGACCGGGTGGTCATCG
ATGCCCCCGGCGGCCGGTTCACCTATCGGATTGCGGCCGTGGGCAGCCTCGCGGCAAGCGAATGA

Upstream 100 bases:

>100_bases
GGAGCCGCCACTCCGTTCGCAGAGCGGAGTGGCTCCGTATGCGCGCAAGACCCGGCCTGTGCCGCCGGTTCACAGACTCC
ATCCGAAAGGTCGTGATGTC

Downstream 100 bases:

>100_bases
GGAGCGGCGGGGGTTCCCCGCCTATTTTTCATGGTTATTTGCCGCCCGGTGAACTTTCCGGGGTTGAGCGGCGTCAGACC
GGCGGGTGATGCCGATGAAC

Product: putative transcription elongation factor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 154; Mature: 154

Protein sequence:

>154_residues
MVRARPPSEIEHMRSRIASRLRVLEELLNTQMEEYFSSPGSEGLAYSVRPHLRRYVEVAGQLLERMGGPDGDPVDDVVFM
DVPVTLVDETDGTEEVYTVVLPEEGDPAKGHISCLSPLGLALLLKRVNDRVVIDAPGGRFTYRIAAVGSLAASE

Sequences:

>Translated_154_residues
MVRARPPSEIEHMRSRIASRLRVLEELLNTQMEEYFSSPGSEGLAYSVRPHLRRYVEVAGQLLERMGGPDGDPVDDVVFM
DVPVTLVDETDGTEEVYTVVLPEEGDPAKGHISCLSPLGLALLLKRVNDRVVIDAPGGRFTYRIAAVGSLAASE
>Mature_154_residues
MVRARPPSEIEHMRSRIASRLRVLEELLNTQMEEYFSSPGSEGLAYSVRPHLRRYVEVAGQLLERMGGPDGDPVDDVVFM
DVPVTLVDETDGTEEVYTVVLPEEGDPAKGHISCLSPLGLALLLKRVNDRVVIDAPGGRFTYRIAAVGSLAASE

Specific function: Unknown

COG id: COG0782

COG function: function code K; Transcription elongation factor

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16891; Mature: 16891

Theoretical pI: Translated: 4.53; Mature: 4.53

Prosite motif: PS00830 GREAB_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVRARPPSEIEHMRSRIASRLRVLEELLNTQMEEYFSSPGSEGLAYSVRPHLRRYVEVAG
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCHHHHHHHHHHH
QLLERMGGPDGDPVDDVVFMDVPVTLVDETDGTEEVYTVVLPEEGDPAKGHISCLSPLGL
HHHHHHCCCCCCCCCCEEEECCCEEEEECCCCCCEEEEEEECCCCCCCCCHHHHHHHHHH
ALLLKRVNDRVVIDAPGGRFTYRIAAVGSLAASE
HHHHHHCCCCEEEECCCCCEEEEEEEHHHHHCCC
>Mature Secondary Structure
MVRARPPSEIEHMRSRIASRLRVLEELLNTQMEEYFSSPGSEGLAYSVRPHLRRYVEVAG
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCHHHHHHHHHHH
QLLERMGGPDGDPVDDVVFMDVPVTLVDETDGTEEVYTVVLPEEGDPAKGHISCLSPLGL
HHHHHHCCCCCCCCCCEEEECCCEEEEECCCCCCEEEEEEECCCCCCCCCHHHHHHHHHH
ALLLKRVNDRVVIDAPGGRFTYRIAAVGSLAASE
HHHHHHCCCCEEEECCCCCEEEEEEEHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA