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The map label for this gene is ynbB [H]

Identifier: 51892876

GI number: 51892876

Start: 1886070

End: 1887344

Strand: Reverse

Name: ynbB [H]

Synonym: STH1738

Alternate gene names: 51892876

Gene position: 1887344-1886070 (Counterclockwise)

Preceding gene: 51892877

Following gene: 51892875

Centisome position: 52.92

GC content: 71.45

Gene sequence:

>1275_bases
TTGAACATCTGGAGTCAACTGATCCCCGACTGCCCGGAACCGATCGCCCGGGCGGCTGACGAGGCCCTGAACCTGGTCCG
CCCCGTGTGGAGCCGGGTGGACGAGCTGGTGCTGCGGAACCAGGCCCGGGTGCTCGCCGCCTTTCAGGAGGCCGGTGTGG
CCGAGGTGCACTTCGCCGAGTCCACCGGGTACGGGTACAACGACATCGGCCGCGAGAAGCTGGACGAGGTGTTCGCCCGC
GCCTTCGGCGCAGAGGCGGGCCTGGTACGGGTGCAGTTCGCCTCGGGCACCCACACCATCGCCACGGGGCTATTCGCCGT
CCTGCGCCCGGGCGACCGGCTGATCGCCGCCGCGGGTGCCCCGTACGACACCCTGCAGCAGGTGATCCGGGGAAAGCCCG
GCAGCCTCGCGGAATGGGGCGTCGCCTACGAGGAGGTGCCGCTGCGGGCCGACCAGACCGTGGACCTGGAGGCCGTGGCT
GAGGCGGTGCGCCGGCCCGACGCCCGCTGCCTCTTCATCCAGCGCTCCCGGGGGTACTCGCTGCGGGCGCCGCTGACCGT
CGCCCAGATCGGCGAGATCATCCGTGCGGCCAAGGCGGCCAACCCGGGGATCGTGACCGTGGTGGACAACTGCTACGGCG
AGTTCGTGGAGGCGCAGGAGCCGCCGCACGTGGGCGCGGACCTGACCTGCGGCTCCCTGATCAAGAACCCCGGCGGGGGC
ATCGCCCCCACCGGCGGGTACATCGTCGGTCGGCAGGACCTGGTGGAGCGGGCGGCCGCCCGCCTGTTCGCCCCCGGCAT
CGGCCCGGAGGTCGGCGCAAACGCCGGGGTCAACCGGCTGCTGTACCAGGGGCTCTTCCTGGCCCCCCACGTCACCGGCG
AGGCGCTGAAGGGGGCCCAGTTCACCGCCGCCTTCTTTGCTCACCTGGGCTTTGCCGTGCGACCTTCCTACGACGCGTAC
CGTTCGGACCTGGTGCAGGCCGTGGAACTGGGGAGGCCGGAGGCGCTCATCGCCTTCTGCCAGGCGGTGCAGCAGGCCAG
CCCGGTGGACGCCCACGTGCGCCCGGAGCCGTGGGACATGCCCGGGTACGACGACCCGGTCATCATGGCCGCGGGCACCT
TCGTGCAGGGGTCGTCCATTGAACTTTCCGCTGACGGGCCGGTCCGCCCGCCGTACGTCGCATATTTTCAGGGGGGTCTT
ACGCGGGAGCACGTCATGCTGGCCGCCCTCCGGGCCGCAAGCGATCTGGCGGCCGCCGGAATCCTTACGGTGTAG

Upstream 100 bases:

>100_bases
TGGGATGGCCCGCCGTCGCGCCTTTGCCCTTCCGGGCGCGGCCTGCAACGGGTAAAATGTACTGGATCCTGCCTATTGGC
TGTTGTTGGAGGTTTGGCCG

Downstream 100 bases:

>100_bases
GGGAGTGGTGTGATGGGCTGGCAGTGGATTGCGTTCGCGATCGCCGTCGTCGTGATGCTGGCGGGCGTGGTCGGCACGCT
GATCCCGGCGCTGCCGGGGC

Product: aluminum resistance protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 424; Mature: 424

Protein sequence:

>424_residues
MNIWSQLIPDCPEPIARAADEALNLVRPVWSRVDELVLRNQARVLAAFQEAGVAEVHFAESTGYGYNDIGREKLDEVFAR
AFGAEAGLVRVQFASGTHTIATGLFAVLRPGDRLIAAAGAPYDTLQQVIRGKPGSLAEWGVAYEEVPLRADQTVDLEAVA
EAVRRPDARCLFIQRSRGYSLRAPLTVAQIGEIIRAAKAANPGIVTVVDNCYGEFVEAQEPPHVGADLTCGSLIKNPGGG
IAPTGGYIVGRQDLVERAAARLFAPGIGPEVGANAGVNRLLYQGLFLAPHVTGEALKGAQFTAAFFAHLGFAVRPSYDAY
RSDLVQAVELGRPEALIAFCQAVQQASPVDAHVRPEPWDMPGYDDPVIMAAGTFVQGSSIELSADGPVRPPYVAYFQGGL
TREHVMLAALRAASDLAAAGILTV

Sequences:

>Translated_424_residues
MNIWSQLIPDCPEPIARAADEALNLVRPVWSRVDELVLRNQARVLAAFQEAGVAEVHFAESTGYGYNDIGREKLDEVFAR
AFGAEAGLVRVQFASGTHTIATGLFAVLRPGDRLIAAAGAPYDTLQQVIRGKPGSLAEWGVAYEEVPLRADQTVDLEAVA
EAVRRPDARCLFIQRSRGYSLRAPLTVAQIGEIIRAAKAANPGIVTVVDNCYGEFVEAQEPPHVGADLTCGSLIKNPGGG
IAPTGGYIVGRQDLVERAAARLFAPGIGPEVGANAGVNRLLYQGLFLAPHVTGEALKGAQFTAAFFAHLGFAVRPSYDAY
RSDLVQAVELGRPEALIAFCQAVQQASPVDAHVRPEPWDMPGYDDPVIMAAGTFVQGSSIELSADGPVRPPYVAYFQGGL
TREHVMLAALRAASDLAAAGILTV
>Mature_424_residues
MNIWSQLIPDCPEPIARAADEALNLVRPVWSRVDELVLRNQARVLAAFQEAGVAEVHFAESTGYGYNDIGREKLDEVFAR
AFGAEAGLVRVQFASGTHTIATGLFAVLRPGDRLIAAAGAPYDTLQQVIRGKPGSLAEWGVAYEEVPLRADQTVDLEAVA
EAVRRPDARCLFIQRSRGYSLRAPLTVAQIGEIIRAAKAANPGIVTVVDNCYGEFVEAQEPPHVGADLTCGSLIKNPGGG
IAPTGGYIVGRQDLVERAAARLFAPGIGPEVGANAGVNRLLYQGLFLAPHVTGEALKGAQFTAAFFAHLGFAVRPSYDAY
RSDLVQAVELGRPEALIAFCQAVQQASPVDAHVRPEPWDMPGYDDPVIMAAGTFVQGSSIELSADGPVRPPYVAYFQGGL
TREHVMLAALRAASDLAAAGILTV

Specific function: Unknown

COG id: COG4100

COG function: function code P; Cystathionine beta-lyase family protein involved in aluminum resistance

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009651
- InterPro:   IPR015424
- InterPro:   IPR015421 [H]

Pfam domain/function: PF06838 Alum_res [H]

EC number: NA

Molecular weight: Translated: 45079; Mature: 45079

Theoretical pI: Translated: 4.93; Mature: 4.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIWSQLIPDCPEPIARAADEALNLVRPVWSRVDELVLRNQARVLAAFQEAGVAEVHFAE
CCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEC
STGYGYNDIGREKLDEVFARAFGAEAGLVRVQFASGTHTIATGLFAVLRPGDRLIAAAGA
CCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHCCCCEEEEECCC
PYDTLQQVIRGKPGSLAEWGVAYEEVPLRADQTVDLEAVAEAVRRPDARCLFIQRSRGYS
CHHHHHHHHCCCCCCHHHHCCHHHHCCCCCCCCCCHHHHHHHHHCCCCEEEEEECCCCCE
LRAPLTVAQIGEIIRAAKAANPGIVTVVDNCYGEFVEAQEPPHVGADLTCGSLIKNPGGG
EECCCHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHCCCCCCCCCCCCCHHHHHCCCCCC
IAPTGGYIVGRQDLVERAAARLFAPGIGPEVGANAGVNRLLYQGLFLAPHVTGEALKGAQ
CCCCCCEEECHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHCCCH
FTAAFFAHLGFAVRPSYDAYRSDLVQAVELGRPEALIAFCQAVQQASPVDAHVRPEPWDM
HHHHHHHHCCCEECCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCC
PGYDDPVIMAAGTFVQGSSIELSADGPVRPPYVAYFQGGLTREHVMLAALRAASDLAAAG
CCCCCCEEEEECCEECCCCEEECCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHC
ILTV
CCCC
>Mature Secondary Structure
MNIWSQLIPDCPEPIARAADEALNLVRPVWSRVDELVLRNQARVLAAFQEAGVAEVHFAE
CCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEC
STGYGYNDIGREKLDEVFARAFGAEAGLVRVQFASGTHTIATGLFAVLRPGDRLIAAAGA
CCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHCCCCEEEEECCC
PYDTLQQVIRGKPGSLAEWGVAYEEVPLRADQTVDLEAVAEAVRRPDARCLFIQRSRGYS
CHHHHHHHHCCCCCCHHHHCCHHHHCCCCCCCCCCHHHHHHHHHCCCCEEEEEECCCCCE
LRAPLTVAQIGEIIRAAKAANPGIVTVVDNCYGEFVEAQEPPHVGADLTCGSLIKNPGGG
EECCCHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHCCCCCCCCCCCCCHHHHHCCCCCC
IAPTGGYIVGRQDLVERAAARLFAPGIGPEVGANAGVNRLLYQGLFLAPHVTGEALKGAQ
CCCCCCEEECHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHCCCH
FTAAFFAHLGFAVRPSYDAYRSDLVQAVELGRPEALIAFCQAVQQASPVDAHVRPEPWDM
HHHHHHHHCCCEECCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCC
PGYDDPVIMAAGTFVQGSSIELSADGPVRPPYVAYFQGGLTREHVMLAALRAASDLAAAG
CCCCCCEEEEECCEECCCCEEECCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHC
ILTV
CCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]