| Definition | Symbiobacterium thermophilum IAM 14863 chromosome, complete genome. |
|---|---|
| Accession | NC_006177 |
| Length | 3,566,135 |
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The map label for this gene is 51892875
Identifier: 51892875
GI number: 51892875
Start: 1885572
End: 1886060
Strand: Reverse
Name: 51892875
Synonym: STH1737
Alternate gene names: NA
Gene position: 1886060-1885572 (Counterclockwise)
Preceding gene: 51892876
Following gene: 51892873
Centisome position: 52.89
GC content: 70.55
Gene sequence:
>489_bases GTGATGGGCTGGCAGTGGATTGCGTTCGCGATCGCCGTCGTCGTGATGCTGGCGGGCGTGGTCGGCACGCTGATCCCGGC GCTGCCGGGGCTGCCGATCGTGTTCCTGGCGATGCTGGGCTACGCCGTCGTCGACGGCTTTCGCGACATTACGCCCGGTT TCCTGGCCGTGGCCCTGCTGGTCGTGGCGGCGACCCAGGTGGCGGAGCACTACGCGCGCGCCTGGGGAGCCAAGCGTTTC GGCGCCGGCCGTGCCGGTGCATGGGGCGCCGTGATCGGCTCCATCGTCGGGCTGTTCTTCATGCCCCTGGGGCTGCTGCT CGGCCCGTTCCTCGGGGCGCTGCTGTTTGAGCTGGTCGCCGGCCGGTCGGGGAGCGAGGCGGTGAAGGCGGGCTTCGGCG GCCTGGTCGGCGTGCTGGGGTCGGTGGTGGTCAACGTGGTGGTCGCCCTGGGACTCACCGTCGCCTTTGTGGCCAAGGTC CTGATATAG
Upstream 100 bases:
>100_bases TTTTCAGGGGGGTCTTACGCGGGAGCACGTCATGCTGGCCGCCCTCCGGGCCGCAAGCGATCTGGCGGCCGCCGGAATCC TTACGGTGTAGGGGAGTGGT
Downstream 100 bases:
>100_bases GCCCACCGCAACGAAATGAGCCCTGTGTGAGCCTTGCGCTCGCACAGGGCTTTCCTGCTTTCCTGCTTTCCTGCCTAGCC CATCCGGCGGACCAGGCCGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 162; Mature: 162
Protein sequence:
>162_residues MMGWQWIAFAIAVVVMLAGVVGTLIPALPGLPIVFLAMLGYAVVDGFRDITPGFLAVALLVVAATQVAEHYARAWGAKRF GAGRAGAWGAVIGSIVGLFFMPLGLLLGPFLGALLFELVAGRSGSEAVKAGFGGLVGVLGSVVVNVVVALGLTVAFVAKV LI
Sequences:
>Translated_162_residues MMGWQWIAFAIAVVVMLAGVVGTLIPALPGLPIVFLAMLGYAVVDGFRDITPGFLAVALLVVAATQVAEHYARAWGAKRF GAGRAGAWGAVIGSIVGLFFMPLGLLLGPFLGALLFELVAGRSGSEAVKAGFGGLVGVLGSVVVNVVVALGLTVAFVAKV LI >Mature_162_residues MMGWQWIAFAIAVVVMLAGVVGTLIPALPGLPIVFLAMLGYAVVDGFRDITPGFLAVALLVVAATQVAEHYARAWGAKRF GAGRAGAWGAVIGSIVGLFFMPLGLLLGPFLGALLFELVAGRSGSEAVKAGFGGLVGVLGSVVVNVVVALGLTVAFVAKV LI
Specific function: Unknown
COG id: COG2839
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16449; Mature: 16449
Theoretical pI: Translated: 10.32; Mature: 10.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMGWQWIAFAIAVVVMLAGVVGTLIPALPGLPIVFLAMLGYAVVDGFRDITPGFLAVALL CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH VVAATQVAEHYARAWGAKRFGAGRAGAWGAVIGSIVGLFFMPLGLLLGPFLGALLFELVA HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GRSGSEAVKAGFGGLVGVLGSVVVNVVVALGLTVAFVAKVLI CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC >Mature Secondary Structure MMGWQWIAFAIAVVVMLAGVVGTLIPALPGLPIVFLAMLGYAVVDGFRDITPGFLAVALL CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH VVAATQVAEHYARAWGAKRFGAGRAGAWGAVIGSIVGLFFMPLGLLLGPFLGALLFELVA HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GRSGSEAVKAGFGGLVGVLGSVVVNVVVALGLTVAFVAKVLI CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA