Definition Symbiobacterium thermophilum IAM 14863 chromosome, complete genome.
Accession NC_006177
Length 3,566,135

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The map label for this gene is 51892846

Identifier: 51892846

GI number: 51892846

Start: 1855703

End: 1856242

Strand: Reverse

Name: 51892846

Synonym: STH1708

Alternate gene names: NA

Gene position: 1856242-1855703 (Counterclockwise)

Preceding gene: 51892849

Following gene: 51892840

Centisome position: 52.05

GC content: 70.74

Gene sequence:

>540_bases
GTGGCCGCCGCCGGCGGCCTGGTCGCGGCCGTAATCTGGCTGGGGACGGACCGGGACGACCGGCTGAGCCACACCCTGGT
CCGCCCCGCCGTCATGGCCCTGCTCAGCCTCCTGCTGCTCGTGATCCTCGCCGAGGCGGAGTTCTGGGCCTACAGCCTCT
CCGCCGCCGCCGCAGGGATCGGGCTGTGGGAGAGCTACCTGGGCGCCTATCTGCTCATGTCGGCGCCCGTGAGCCGCACC
GGCCCCGTGGCCCAGGTGCGCACCACGGCCCGCTGGCTGCTCAACACCCTGGCCAACCTGATGTTGCTGAACCTTTCCGC
CCAGCTGGCCTTTCCGCACACCTTCGAGTGGCGCGGCATCCCGGCCTCGGCCCTGGACGTGGCGTACTTCACCGTCCTCA
CCTTCGCATCGGGAGGGTACGGCGACGTGCTCCCGGCCAGCCCGCTGGGCAAGCTGCTGGCCATGCTCACCAGCGTGAGC
GGCCTGCTGTTTGCGACGATCCTGTTCGCCGCGCTCTTCCACCGTCTGCGGGAGGAGTGA

Upstream 100 bases:

>100_bases
GGATATTCAGCGGGAACGGGGGCTAGTACACCCGGCATGCGGGCGGGGTGGACGGGCGTATGGAACAGCGGGAGGAAGTG
CGATGGGTCACCTGCTGTTC

Downstream 100 bases:

>100_bases
GAGACGAACGAACCGGCCGGGGAACCCCCCGGCCGGCGTCGGGCCTCAGCGGGTGAACGGCTCCGACAGCGCGGTCACCC
GGTCCATGACCTCCTGCGGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 179; Mature: 178

Protein sequence:

>179_residues
MAAAGGLVAAVIWLGTDRDDRLSHTLVRPAVMALLSLLLLVILAEAEFWAYSLSAAAAGIGLWESYLGAYLLMSAPVSRT
GPVAQVRTTARWLLNTLANLMLLNLSAQLAFPHTFEWRGIPASALDVAYFTVLTFASGGYGDVLPASPLGKLLAMLTSVS
GLLFATILFAALFHRLREE

Sequences:

>Translated_179_residues
MAAAGGLVAAVIWLGTDRDDRLSHTLVRPAVMALLSLLLLVILAEAEFWAYSLSAAAAGIGLWESYLGAYLLMSAPVSRT
GPVAQVRTTARWLLNTLANLMLLNLSAQLAFPHTFEWRGIPASALDVAYFTVLTFASGGYGDVLPASPLGKLLAMLTSVS
GLLFATILFAALFHRLREE
>Mature_178_residues
AAAGGLVAAVIWLGTDRDDRLSHTLVRPAVMALLSLLLLVILAEAEFWAYSLSAAAAGIGLWESYLGAYLLMSAPVSRTG
PVAQVRTTARWLLNTLANLMLLNLSAQLAFPHTFEWRGIPASALDVAYFTVLTFASGGYGDVLPASPLGKLLAMLTSVSG
LLFATILFAALFHRLREE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19120; Mature: 18988

Theoretical pI: Translated: 6.80; Mature: 6.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAAAGGLVAAVIWLGTDRDDRLSHTLVRPAVMALLSLLLLVILAEAEFWAYSLSAAAAGI
CCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GLWESYLGAYLLMSAPVSRTGPVAQVRTTARWLLNTLANLMLLNLSAQLAFPHTFEWRGI
HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
PASALDVAYFTVLTFASGGYGDVLPASPLGKLLAMLTSVSGLLFATILFAALFHRLREE
CHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
AAAGGLVAAVIWLGTDRDDRLSHTLVRPAVMALLSLLLLVILAEAEFWAYSLSAAAAGI
CCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GLWESYLGAYLLMSAPVSRTGPVAQVRTTARWLLNTLANLMLLNLSAQLAFPHTFEWRGI
HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
PASALDVAYFTVLTFASGGYGDVLPASPLGKLLAMLTSVSGLLFATILFAALFHRLREE
CHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA