Definition Symbiobacterium thermophilum IAM 14863 chromosome, complete genome.
Accession NC_006177
Length 3,566,135

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The map label for this gene is 51892840

Identifier: 51892840

GI number: 51892840

Start: 1849439

End: 1850557

Strand: Reverse

Name: 51892840

Synonym: STH1702

Alternate gene names: NA

Gene position: 1850557-1849439 (Counterclockwise)

Preceding gene: 51892846

Following gene: 51892839

Centisome position: 51.89

GC content: 67.56

Gene sequence:

>1119_bases
TTGAGTTCTGCCGAAGCAACCAGCCCCTACAGCGCAAGCAGTATCATCATCATCCCGGCCCTGGAGCCACCGCCCGCCCT
GGTGAAGTACGTACAGGCTCTGCTGGAGCGCGGGTTTCCGCGGATCGTCATCGTCGACGACGGAAGCAGCCCCGCCTGCC
GCTCCATCTTTGACAGCCTGGCCCGAATGAGCGGATGCGTGGTGCTGCGGCACGAGGTGAACCGCGGCAAGGGAGCCGCC
CTGAAGACGGCCCTGCGCCACTGCTTGCAGCAGGGGTGGCAACAGATCTACCGCCGCGTCATCATGGTCGACGCCGACGG
GCAGCACGCGGTGGAGGACGTCTGCGGCATGGCCAGGGCCTCCCACGAGCACCCCGACGCCTACGTGCTCGGCATCCGTG
ACTTCAACCAGAAGAGCGTGCCCGCCCGCAGCCGCTTCGGCAACCGGCTGACCAGCGGCGCCTTCCACCTCTTCTACGGC
CGCTACCTGCGGGACACCCAGACCGGGCTCAGGGCCCTGCCCATCAGCCTGTGGGAGTGGGCGACCCAGATCGCGGGCGA
GCGCTTCGAGTACGAGACCAACTGCCTGGTGCAGGCCATGAAGCAGGGCATCCCCATGGCGGAGATGCCCATCCGGACGC
TCTACTTCAACAAGAACGAGAACACGCACTACCGCACGCTCCGGGACTCGTGGCCCATTTTCAAGATCCTGATCCGCCAC
CTGGGCGCCTATGCGCTGGCCGGCGCGATCGCCTCCGCGGTGACGCTGGCCGTGTTCGCCTGGGTGGACCTGGTCTGGCT
GAAGGGTGCAGCCCCGGCCGGCCGCCTGCTGGCGGCCAGCGTCGTCAGCGCCGCGGCCGGGTCGCTGGCGCGCCTCCTCC
TTCATTGGGTGCTGCGCGTGCGCACCGAGCGAAACATGACCGACGCCACCGCCACGTACTACCTGCTGGTGGCCGTGCAG
ATGCTGGCCTCGTACCTCGTGGTGCTCGCGGTGCATCTCCTCACCGACTGGACGGCCGTGTGGATCAAGCTGGTGGCCGA
CATCCTGCTGGCGGTGGCGGGTTACCAGATTCACCCGCGCTGGCTGTTCAAGTCCGACCACACCCCCGAGGGAGTCTGA

Upstream 100 bases:

>100_bases
GGGTCAGGCAGGAACGCCCGCAGTTCAGGCGGAATAGTAGTCCTTAGGTTTTTCGCGGCCTGACCGGGAAGCCGGAAGCG
AACGGGAGCGTGAAACGGAC

Downstream 100 bases:

>100_bases
CATGCCCTTCTACGGCAAGCTGTTCCTGTTCTGCCGCGCCGTGCTCCGGCGCCTGTCCCCGCGCTACACCCTTGTCCACC
CGGAGCGGCTGCTGGAGCCT

Product: putative dolichyl-phosphate mannose synthase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 372; Mature: 371

Protein sequence:

>372_residues
MSSAEATSPYSASSIIIIPALEPPPALVKYVQALLERGFPRIVIVDDGSSPACRSIFDSLARMSGCVVLRHEVNRGKGAA
LKTALRHCLQQGWQQIYRRVIMVDADGQHAVEDVCGMARASHEHPDAYVLGIRDFNQKSVPARSRFGNRLTSGAFHLFYG
RYLRDTQTGLRALPISLWEWATQIAGERFEYETNCLVQAMKQGIPMAEMPIRTLYFNKNENTHYRTLRDSWPIFKILIRH
LGAYALAGAIASAVTLAVFAWVDLVWLKGAAPAGRLLAASVVSAAAGSLARLLLHWVLRVRTERNMTDATATYYLLVAVQ
MLASYLVVLAVHLLTDWTAVWIKLVADILLAVAGYQIHPRWLFKSDHTPEGV

Sequences:

>Translated_372_residues
MSSAEATSPYSASSIIIIPALEPPPALVKYVQALLERGFPRIVIVDDGSSPACRSIFDSLARMSGCVVLRHEVNRGKGAA
LKTALRHCLQQGWQQIYRRVIMVDADGQHAVEDVCGMARASHEHPDAYVLGIRDFNQKSVPARSRFGNRLTSGAFHLFYG
RYLRDTQTGLRALPISLWEWATQIAGERFEYETNCLVQAMKQGIPMAEMPIRTLYFNKNENTHYRTLRDSWPIFKILIRH
LGAYALAGAIASAVTLAVFAWVDLVWLKGAAPAGRLLAASVVSAAAGSLARLLLHWVLRVRTERNMTDATATYYLLVAVQ
MLASYLVVLAVHLLTDWTAVWIKLVADILLAVAGYQIHPRWLFKSDHTPEGV
>Mature_371_residues
SSAEATSPYSASSIIIIPALEPPPALVKYVQALLERGFPRIVIVDDGSSPACRSIFDSLARMSGCVVLRHEVNRGKGAAL
KTALRHCLQQGWQQIYRRVIMVDADGQHAVEDVCGMARASHEHPDAYVLGIRDFNQKSVPARSRFGNRLTSGAFHLFYGR
YLRDTQTGLRALPISLWEWATQIAGERFEYETNCLVQAMKQGIPMAEMPIRTLYFNKNENTHYRTLRDSWPIFKILIRHL
GAYALAGAIASAVTLAVFAWVDLVWLKGAAPAGRLLAASVVSAAAGSLARLLLHWVLRVRTERNMTDATATYYLLVAVQM
LASYLVVLAVHLLTDWTAVWIKLVADILLAVAGYQIHPRWLFKSDHTPEGV

Specific function: Unknown

COG id: COG0463

COG function: function code M; Glycosyltransferases involved in cell wall biogenesis

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: NA

Molecular weight: Translated: 41323; Mature: 41192

Theoretical pI: Translated: 9.53; Mature: 9.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSAEATSPYSASSIIIIPALEPPPALVKYVQALLERGFPRIVIVDDGSSPACRSIFDSL
CCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHH
ARMSGCVVLRHEVNRGKGAALKTALRHCLQQGWQQIYRRVIMVDADGQHAVEDVCGMARA
HHHHCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHEEEECCCCCHHHHHHHHHHHC
SHEHPDAYVLGIRDFNQKSVPARSRFGNRLTSGAFHLFYGRYLRDTQTGLRALPISLWEW
CCCCCCEEEEEEECCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ATQIAGERFEYETNCLVQAMKQGIPMAEMPIRTLYFNKNENTHYRTLRDSWPIFKILIRH
HHHHCCCCCCHHHHHHHHHHHCCCCCHHCCCEEEEEECCCCCCCHHHHHCCHHHHHHHHH
LGAYALAGAIASAVTLAVFAWVDLVWLKGAAPAGRLLAASVVSAAAGSLARLLLHWVLRV
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
RTERNMTDATATYYLLVAVQMLASYLVVLAVHLLTDWTAVWIKLVADILLAVAGYQIHPR
HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEECCE
WLFKSDHTPEGV
EEECCCCCCCCC
>Mature Secondary Structure 
SSAEATSPYSASSIIIIPALEPPPALVKYVQALLERGFPRIVIVDDGSSPACRSIFDSL
CCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHH
ARMSGCVVLRHEVNRGKGAALKTALRHCLQQGWQQIYRRVIMVDADGQHAVEDVCGMARA
HHHHCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHEEEECCCCCHHHHHHHHHHHC
SHEHPDAYVLGIRDFNQKSVPARSRFGNRLTSGAFHLFYGRYLRDTQTGLRALPISLWEW
CCCCCCEEEEEEECCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ATQIAGERFEYETNCLVQAMKQGIPMAEMPIRTLYFNKNENTHYRTLRDSWPIFKILIRH
HHHHCCCCCCHHHHHHHHHHHCCCCCHHCCCEEEEEECCCCCCCHHHHHCCHHHHHHHHH
LGAYALAGAIASAVTLAVFAWVDLVWLKGAAPAGRLLAASVVSAAAGSLARLLLHWVLRV
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
RTERNMTDATATYYLLVAVQMLASYLVVLAVHLLTDWTAVWIKLVADILLAVAGYQIHPR
HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEECCE
WLFKSDHTPEGV
EEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]