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The map label for this gene is 51892792

Identifier: 51892792

GI number: 51892792

Start: 1798792

End: 1799319

Strand: Reverse

Name: 51892792

Synonym: STH1654

Alternate gene names: NA

Gene position: 1799319-1798792 (Counterclockwise)

Preceding gene: 51892800

Following gene: 51892780

Centisome position: 50.46

GC content: 72.73

Gene sequence:

>528_bases
GTGATTTTCGTCCGAGAGCTGTCGGCCGAGGAGCGCGCCGAGCTGGAGCGCGCCGCCCGGCGCCGCCACCGGGTGGTGAG
CAGCCGGCGGGCGGCCATCGTGCTCGCCTCGGCGCAGGGGCTGACGGCGCCGCAGATCGCCCAGCGCTTCCACTGTTCCG
TCGACCACGTGCGCCACGTCATCCACCACTTTAACGAGCACGGCCTGGACGCGTTGAAGCCGGCGTACTGCGGCGGTCGA
CCCCGGGTCTTCGATGCCAACCAGCGGGCCCGCATCGTGAAGCTGGCCCTCACGCCCCCCCAGGTCGCTGGGTTTCCGTG
GCCCTGCTGGTCGCTCTCGCGCCTGCAGGAGGCCCTCGTGCAGCTCCACATCGTCGACGGGATCAGCAAGGAGACCATCC
GGCTGGTGCTGGACGAGGCCGGGGTGCGCTGTCGGAGCAGGGGGGCGTGGCGGCTCGCGGGGCGCCGCGCCCGCAAGGGC
GCGACCCACGCCGCACCCGGCGATTCCGGTGAACTCCCGACCGACTGA

Upstream 100 bases:

>100_bases
AACGTCAATCTGGATTTCTGCCAGCGAAAAACCAGGTAGGAAGGACTTTTTGAAGGGACTGCGAACCCTTAATCAACAGC
TGTTGCTAGGAGGATGCAGG

Downstream 100 bases:

>100_bases
AACGGGCCATCGCGCGCATCACCAGCCCCCCTCACGCGGGGCGGGCTGGTGATGCGCGCTCTCAGTTGCCGTTCAGGTGA
TGAAGGTTCTCCCAGGTGAC

Product: transposase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 175; Mature: 175

Protein sequence:

>175_residues
MIFVRELSAEERAELERAARRRHRVVSSRRAAIVLASAQGLTAPQIAQRFHCSVDHVRHVIHHFNEHGLDALKPAYCGGR
PRVFDANQRARIVKLALTPPQVAGFPWPCWSLSRLQEALVQLHIVDGISKETIRLVLDEAGVRCRSRGAWRLAGRRARKG
ATHAAPGDSGELPTD

Sequences:

>Translated_175_residues
MIFVRELSAEERAELERAARRRHRVVSSRRAAIVLASAQGLTAPQIAQRFHCSVDHVRHVIHHFNEHGLDALKPAYCGGR
PRVFDANQRARIVKLALTPPQVAGFPWPCWSLSRLQEALVQLHIVDGISKETIRLVLDEAGVRCRSRGAWRLAGRRARKG
ATHAAPGDSGELPTD
>Mature_175_residues
MIFVRELSAEERAELERAARRRHRVVSSRRAAIVLASAQGLTAPQIAQRFHCSVDHVRHVIHHFNEHGLDALKPAYCGGR
PRVFDANQRARIVKLALTPPQVAGFPWPCWSLSRLQEALVQLHIVDGISKETIRLVLDEAGVRCRSRGAWRLAGRRARKG
ATHAAPGDSGELPTD

Specific function: Unknown

COG id: COG3335

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19482; Mature: 19482

Theoretical pI: Translated: 11.42; Mature: 11.42

Prosite motif: PS00290 IG_MHC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIFVRELSAEERAELERAARRRHRVVSSRRAAIVLASAQGLTAPQIAQRFHCSVDHVRHV
CEEEECCCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHCCCHHHHHHH
IHHFNEHGLDALKPAYCGGRPRVFDANQRARIVKLALTPPQVAGFPWPCWSLSRLQEALV
HHHHHHCCHHHHCHHHCCCCCCEECCCCCCEEEEEEECCCHHCCCCCCCCCHHHHHHHHH
QLHIVDGISKETIRLVLDEAGVRCRSRGAWRLAGRRARKGATHAAPGDSGELPTD
HHHHHCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MIFVRELSAEERAELERAARRRHRVVSSRRAAIVLASAQGLTAPQIAQRFHCSVDHVRHV
CEEEECCCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHCCCHHHHHHH
IHHFNEHGLDALKPAYCGGRPRVFDANQRARIVKLALTPPQVAGFPWPCWSLSRLQEALV
HHHHHHCCHHHHCHHHCCCCCCEECCCCCCEEEEEEECCCHHCCCCCCCCCHHHHHHHHH
QLHIVDGISKETIRLVLDEAGVRCRSRGAWRLAGRRARKGATHAAPGDSGELPTD
HHHHHCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA