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The map label for this gene is gerKA2 [H]

Identifier: 51892780

GI number: 51892780

Start: 1786453

End: 1788156

Strand: Reverse

Name: gerKA2 [H]

Synonym: STH1642

Alternate gene names: 51892780

Gene position: 1788156-1786453 (Counterclockwise)

Preceding gene: 51892792

Following gene: 51892779

Centisome position: 50.14

GC content: 70.19

Gene sequence:

>1704_bases
GTGTCAACCCGAAGCGGCAGCACGCCGCACCGGCTCCGGGTGCACCGGCTGGCCGGCCAGTCGCTCCAGCTCGAGGCCTA
CTTCCGGTCCCTGGGCCTGGCCCGGGAAGCCGATCTGGCGCGCCGGATGGCCGTATCGCCCCGGTCCGAGACCCGGCTGT
TCGAACTCGTTCACCGCAACCCGGCGCTTCCCGTCCCCGCCCGTCTCGGGCAGGCCGAGGCCCTGATGGACCTGTACTTC
GGACACAGCCAGGACCTGACGGTCCGCCACATCTCGCTGGAACCGGGGGCGGTGCCGGCGATGATCGTCTACCTGCCCAC
GATGGTGGACGAACCGCGGCTGGACCAGAGCCTCCACTCGCTGCTGCAGCCGGCCTCGGCGGCGGAGCGGCCGCCCGCGG
CCCGGGATGTAGTGGGCTGGATCCGGCACCACCAGGTCAGCGCTCCGGATACCAGTGAGGTCGTCCAGATCCGGCAGGCG
GCCTTCGCCGTCTCCGAGGGCATGGCGGTGCTCTTCGTCGAGGGGTCGGGATGCGCCCTGGCCTTCGACGTCACCGGCGG
CCCGCAGCGGGCCATCAGCGAGTCCAAGACCCAGCGGGTGGTCCGGGGCCCCCGGGAGGGCTTCATCGAGTCGATTCACG
TCAACCTCACCCTGATCCGCCGCCGCGTCCGGGACCCCCGGCTGCGGGTCGACATGCTCACCGTCGGCGAGTTGACCCGC
ACCCGGGTGGCCGTCTGCTACCTGGCCACCGTCTGCAAGCAGTCACTGATCGATGAGGCAATGCGGCGCATCCGCCGGGT
GAAGGTGGACGGCATGCTGGACAGCGGCCAGCTGATGGAGTTGATCGAGGACACGCCCTGGACCGTCTTCCCGCTGGTCC
GGGCCACCGAGCGGCCGGACGCGGTGGTGGGCGGGCTCCTGGAAGGCCGCTTCGCCATCGTCGTCGACGGAAGCCCCTGG
GTGCTCGTGGCGCCCTCGACCTTCATGGACCTGATCCACTCACCGGAGGACTACTTCGAGCGTTTCCCCGCCGTCGTGCT
GGTGCGGATCCTCCGGGTGCTGTTCGCCGCGGTCGCGCTCTTCGGCCCCTCCATCTACGTCGCCCTGACGACCTTCCATC
GGGAGACGATCCCCACCAATCTCCTGCTCACGATCATGGCGGCCCGCGAAGGGATCCCCTTCCCGGCCGCGATGGAGGCA
TTCATGATGGAACTCGGCTTCGAGATCATCCGGGAGGCCGGCGTGCGCATGCCGTCCCAGCTGGGACAATCGGTCTCCAT
CGTGGGCGCCCTGATTCTGGGCGAGTCGGCCATCCAGGCCGGTATCGTCTCGGCCCCCATGATCATCACCGTCGCGGTCA
CCGCGCTGGCCAACCTCATGCTTCCCGATTACTCGACCGCGCTGGCCCTCCGGATGCTGCGGTTCCCCTTGCTGATCCTG
GCCGGGACCTACGGGGCGTACGGCCTGATCCTGGGGGCGACCGCGCTGCTCATTCACCTGCTCAGCCTGCGGTCCTTCGG
CACGCCCTACATGGCGCCCTTCGGCCCCCTCCTGCCGTCCGACCTGCGCGACACCGTCGTCCGGTCCCCGCTCTGGGCGC
GGCAGAAGCGCCCCGCCGCGGTGGAACAGACCGATCCCGTCCGGGCAGGCCATGGGATGAAACCCGGTCCCGGGCCGGTG
CGGCGCGCGGGAGCACGGCGATGA

Upstream 100 bases:

>100_bases
CCGCGCCCCGGCCCCAGTCCTGCGCCAGGCATGCGGATCGTTCCGGCGGGCGCATACTATCGGCAGCCTCGGCCGGGGGG
TGCAGAACTTGCGCTACCGC

Downstream 100 bases:

>100_bases
GGCGGGTCGCCGCCCTGCTGTTGCTGCTGCCGCTGCTCACGGGTTGCTGGGGCCGGCTGGAGCTGGCCGACCTCGCGCTG
GTCATCGCCCTGGGCGTCGA

Product: spore germination protein KA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 567; Mature: 566

Protein sequence:

>567_residues
MSTRSGSTPHRLRVHRLAGQSLQLEAYFRSLGLAREADLARRMAVSPRSETRLFELVHRNPALPVPARLGQAEALMDLYF
GHSQDLTVRHISLEPGAVPAMIVYLPTMVDEPRLDQSLHSLLQPASAAERPPAARDVVGWIRHHQVSAPDTSEVVQIRQA
AFAVSEGMAVLFVEGSGCALAFDVTGGPQRAISESKTQRVVRGPREGFIESIHVNLTLIRRRVRDPRLRVDMLTVGELTR
TRVAVCYLATVCKQSLIDEAMRRIRRVKVDGMLDSGQLMELIEDTPWTVFPLVRATERPDAVVGGLLEGRFAIVVDGSPW
VLVAPSTFMDLIHSPEDYFERFPAVVLVRILRVLFAAVALFGPSIYVALTTFHRETIPTNLLLTIMAAREGIPFPAAMEA
FMMELGFEIIREAGVRMPSQLGQSVSIVGALILGESAIQAGIVSAPMIITVAVTALANLMLPDYSTALALRMLRFPLLIL
AGTYGAYGLILGATALLIHLLSLRSFGTPYMAPFGPLLPSDLRDTVVRSPLWARQKRPAAVEQTDPVRAGHGMKPGPGPV
RRAGARR

Sequences:

>Translated_567_residues
MSTRSGSTPHRLRVHRLAGQSLQLEAYFRSLGLAREADLARRMAVSPRSETRLFELVHRNPALPVPARLGQAEALMDLYF
GHSQDLTVRHISLEPGAVPAMIVYLPTMVDEPRLDQSLHSLLQPASAAERPPAARDVVGWIRHHQVSAPDTSEVVQIRQA
AFAVSEGMAVLFVEGSGCALAFDVTGGPQRAISESKTQRVVRGPREGFIESIHVNLTLIRRRVRDPRLRVDMLTVGELTR
TRVAVCYLATVCKQSLIDEAMRRIRRVKVDGMLDSGQLMELIEDTPWTVFPLVRATERPDAVVGGLLEGRFAIVVDGSPW
VLVAPSTFMDLIHSPEDYFERFPAVVLVRILRVLFAAVALFGPSIYVALTTFHRETIPTNLLLTIMAAREGIPFPAAMEA
FMMELGFEIIREAGVRMPSQLGQSVSIVGALILGESAIQAGIVSAPMIITVAVTALANLMLPDYSTALALRMLRFPLLIL
AGTYGAYGLILGATALLIHLLSLRSFGTPYMAPFGPLLPSDLRDTVVRSPLWARQKRPAAVEQTDPVRAGHGMKPGPGPV
RRAGARR
>Mature_566_residues
STRSGSTPHRLRVHRLAGQSLQLEAYFRSLGLAREADLARRMAVSPRSETRLFELVHRNPALPVPARLGQAEALMDLYFG
HSQDLTVRHISLEPGAVPAMIVYLPTMVDEPRLDQSLHSLLQPASAAERPPAARDVVGWIRHHQVSAPDTSEVVQIRQAA
FAVSEGMAVLFVEGSGCALAFDVTGGPQRAISESKTQRVVRGPREGFIESIHVNLTLIRRRVRDPRLRVDMLTVGELTRT
RVAVCYLATVCKQSLIDEAMRRIRRVKVDGMLDSGQLMELIEDTPWTVFPLVRATERPDAVVGGLLEGRFAIVVDGSPWV
LVAPSTFMDLIHSPEDYFERFPAVVLVRILRVLFAAVALFGPSIYVALTTFHRETIPTNLLLTIMAAREGIPFPAAMEAF
MMELGFEIIREAGVRMPSQLGQSVSIVGALILGESAIQAGIVSAPMIITVAVTALANLMLPDYSTALALRMLRFPLLILA
GTYGAYGLILGATALLIHLLSLRSFGTPYMAPFGPLLPSDLRDTVVRSPLWARQKRPAAVEQTDPVRAGHGMKPGPGPVR
RAGARR

Specific function: Involved in the germination response to the combination of glucose, fructose, L-asparagine, and KCl [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gerABKA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004995 [H]

Pfam domain/function: PF03323 GerA [H]

EC number: NA

Molecular weight: Translated: 62056; Mature: 61924

Theoretical pI: Translated: 9.98; Mature: 9.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTRSGSTPHRLRVHRLAGQSLQLEAYFRSLGLAREADLARRMAVSPRSETRLFELVHRN
CCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHCC
PALPVPARLGQAEALMDLYFGHSQDLTVRHISLEPGAVPAMIVYLPTMVDEPRLDQSLHS
CCCCCCHHCCHHHHHHHHHCCCCCCCEEEEEECCCCCCCEEEHHHHHHCCCCCHHHHHHH
LLQPASAAERPPAARDVVGWIRHHQVSAPDTSEVVQIRQAAFAVSEGMAVLFVEGSGCAL
HHCCHHHCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEECCCEEE
AFDVTGGPQRAISESKTQRVVRGPREGFIESIHVNLTLIRRRVRDPRLRVDMLTVGELTR
EEECCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEHHHHHH
TRVAVCYLATVCKQSLIDEAMRRIRRVKVDGMLDSGQLMELIEDTPWTVFPLVRATERPD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCEEEHHHHCCCCCH
AVVGGLLEGRFAIVVDGSPWVLVAPSTFMDLIHSPEDYFERFPAVVLVRILRVLFAAVAL
HHHHHHHCCCEEEEECCCCEEEECCHHHHHHHCCCHHHHHHCHHHHHHHHHHHHHHHHHH
FGPSIYVALTTFHRETIPTNLLLTIMAAREGIPFPAAMEAFMMELGFEIIREAGVRMPSQ
HCCCCEEEEEHHHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHH
LGQSVSIVGALILGESAIQAGIVSAPMIITVAVTALANLMLPDYSTALALRMLRFPLLIL
HCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
AGTYGAYGLILGATALLIHLLSLRSFGTPYMAPFGPLLPSDLRDTVVRSPLWARQKRPAA
HCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCHHHHCCCCCC
VEQTDPVRAGHGMKPGPGPVRRAGARR
CCCCCCCCCCCCCCCCCCHHHHCCCCC
>Mature Secondary Structure 
STRSGSTPHRLRVHRLAGQSLQLEAYFRSLGLAREADLARRMAVSPRSETRLFELVHRN
CCCCCCCCHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHCC
PALPVPARLGQAEALMDLYFGHSQDLTVRHISLEPGAVPAMIVYLPTMVDEPRLDQSLHS
CCCCCCHHCCHHHHHHHHHCCCCCCCEEEEEECCCCCCCEEEHHHHHHCCCCCHHHHHHH
LLQPASAAERPPAARDVVGWIRHHQVSAPDTSEVVQIRQAAFAVSEGMAVLFVEGSGCAL
HHCCHHHCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEECCCEEE
AFDVTGGPQRAISESKTQRVVRGPREGFIESIHVNLTLIRRRVRDPRLRVDMLTVGELTR
EEECCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEHHHHHH
TRVAVCYLATVCKQSLIDEAMRRIRRVKVDGMLDSGQLMELIEDTPWTVFPLVRATERPD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCEEEHHHHCCCCCH
AVVGGLLEGRFAIVVDGSPWVLVAPSTFMDLIHSPEDYFERFPAVVLVRILRVLFAAVAL
HHHHHHHCCCEEEEECCCCEEEECCHHHHHHHCCCHHHHHHCHHHHHHHHHHHHHHHHHH
FGPSIYVALTTFHRETIPTNLLLTIMAAREGIPFPAAMEAFMMELGFEIIREAGVRMPSQ
HCCCCEEEEEHHHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHH
LGQSVSIVGALILGESAIQAGIVSAPMIITVAVTALANLMLPDYSTALALRMLRFPLLIL
HCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
AGTYGAYGLILGATALLIHLLSLRSFGTPYMAPFGPLLPSDLRDTVVRSPLWARQKRPAA
HCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCHHHHCCCCCC
VEQTDPVRAGHGMKPGPGPVRRAGARR
CCCCCCCCCCCCCCCCCCHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8969502; 9384377 [H]