| Definition | Symbiobacterium thermophilum IAM 14863 chromosome, complete genome. |
|---|---|
| Accession | NC_006177 |
| Length | 3,566,135 |
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The map label for this gene is 51892691
Identifier: 51892691
GI number: 51892691
Start: 1690272
End: 1690736
Strand: Reverse
Name: 51892691
Synonym: STH1553
Alternate gene names: NA
Gene position: 1690736-1690272 (Counterclockwise)
Preceding gene: 51892700
Following gene: 51892690
Centisome position: 47.41
GC content: 71.18
Gene sequence:
>465_bases GTGAAAGCCGGCCGTGTGCCCGACGGGCTCCTCAGCCCACGGTGCCGCGGCCACGATGGCAGTAACGCCGGGGTGGCCCC TATGCCGGCCCCGCCCGTGAACCGCGGGGACGGACGGCCCGTCTTTATGGCGAAGGGAGGCTCCGCCATGCGGAAGATCG GACTGGGACTGTTGATCCTGCTGGCCTGCGCCCCGGCGCTCTACTGGGCGCCGTGGCTCAGCGCGGACGCGGCGCAGCAG CGGGCGGAGGCCTCCTTCACGTCAGGCTGGACCGGCGTGGTAGACGGCTGCGGGATCAACTGCCAGGGCTGCGGCTCGGT GGGGGCTGAGCGCGTCCCGTTCGGCTGGCGGGTGGAGCTTGAGTACGCCTGCGGACTTCTCCCGGCGGACCTGCCGGAAC ACCACCGGCGCACCGTGCTCTTCGTCTCTGCCTTCGGCACGGTGCACAGGGTCAACCAGCAGTAA
Upstream 100 bases:
>100_bases AGAGAGGGCCTGATCCAGGTCCTCCCGCCGGAAAGCCGAGCATCCTTCGGCGACCCCCCTGCGGCGGCCGCCCCGGCGGG GAGCAGCCAGACGATGCCAC
Downstream 100 bases:
>100_bases AGGAGGCGCTGGCCGTGGCGCAGATTCGCGACTACCGACCCGAGGACGCCCCCACCCTGCAGGACCTCCTTCGGCAGATC TGGGGCCAGGACACGTGGAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 154; Mature: 154
Protein sequence:
>154_residues MKAGRVPDGLLSPRCRGHDGSNAGVAPMPAPPVNRGDGRPVFMAKGGSAMRKIGLGLLILLACAPALYWAPWLSADAAQQ RAEASFTSGWTGVVDGCGINCQGCGSVGAERVPFGWRVELEYACGLLPADLPEHHRRTVLFVSAFGTVHRVNQQ
Sequences:
>Translated_154_residues MKAGRVPDGLLSPRCRGHDGSNAGVAPMPAPPVNRGDGRPVFMAKGGSAMRKIGLGLLILLACAPALYWAPWLSADAAQQ RAEASFTSGWTGVVDGCGINCQGCGSVGAERVPFGWRVELEYACGLLPADLPEHHRRTVLFVSAFGTVHRVNQQ >Mature_154_residues MKAGRVPDGLLSPRCRGHDGSNAGVAPMPAPPVNRGDGRPVFMAKGGSAMRKIGLGLLILLACAPALYWAPWLSADAAQQ RAEASFTSGWTGVVDGCGINCQGCGSVGAERVPFGWRVELEYACGLLPADLPEHHRRTVLFVSAFGTVHRVNQQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16237; Mature: 16237
Theoretical pI: Translated: 8.62; Mature: 8.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.9 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 6.5 %Cys+Met (Translated Protein) 3.9 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 6.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKAGRVPDGLLSPRCRGHDGSNAGVAPMPAPPVNRGDGRPVFMAKGGSAMRKIGLGLLIL CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHH LACAPALYWAPWLSADAAQQRAEASFTSGWTGVVDGCGINCQGCGSVGAERVPFGWRVEL HHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEE EYACGLLPADLPEHHRRTVLFVSAFGTVHRVNQQ HEECCCCCCCCCCCCCEEEEEEECCCHHHHCCCC >Mature Secondary Structure MKAGRVPDGLLSPRCRGHDGSNAGVAPMPAPPVNRGDGRPVFMAKGGSAMRKIGLGLLIL CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHH LACAPALYWAPWLSADAAQQRAEASFTSGWTGVVDGCGINCQGCGSVGAERVPFGWRVEL HHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEE EYACGLLPADLPEHHRRTVLFVSAFGTVHRVNQQ HEECCCCCCCCCCCCCEEEEEEECCCHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA