| Definition | Symbiobacterium thermophilum IAM 14863 chromosome, complete genome. |
|---|---|
| Accession | NC_006177 |
| Length | 3,566,135 |
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The map label for this gene is 51892690
Identifier: 51892690
GI number: 51892690
Start: 1689322
End: 1690257
Strand: Reverse
Name: 51892690
Synonym: STH1552
Alternate gene names: NA
Gene position: 1690257-1689322 (Counterclockwise)
Preceding gene: 51892691
Following gene: 51892642
Centisome position: 47.4
GC content: 72.76
Gene sequence:
>936_bases GTGGCGCAGATTCGCGACTACCGACCCGAGGACGCCCCCACCCTGCAGGACCTCCTTCGGCAGATCTGGGGCCAGGACAC GTGGACCGTGCAGTATTACCGCTTCGGCGCCAGCGCCCCGACGGCACAAGGCGGCTTCCTGCGCACGCTGGTGGCCGACG AAGGCGGAACGCTTGTCGGATTCGGCTCCGCCTGGACCAACCCGTTTCATCCACACGCCCTGTACGTGGGGATCAACGTG CACCCGCGGTTCGGGCGCCGGGGGCTGGGCACGCGGCTCTTGATGGCGCTGGCGCAGCGTAGCCCCGGCCGTCTCCCCCT GCAGGGCTCCACCTGGGAGCACAGCGAATCCGGCATGCGCTTCGCCAGGCGCCACGGCTTCACGGAGGTGCGGCGCACCT GGGAGCCCGAGCTGCCGCTGGGGGACCCGCAGGAGGACCTCCACGCGGACTGCGAGAGCCGCTGCGCCGCGCTGGGTTAC GCGATCGTCCCGCTGGCTGACCTGCAGGCTGCGTCCGACGGGCTCCGGCAACTGGCACCCCTGCTGGCGGAGGTCTACAC GGCGACCCACGGCCCGAACCCGCCCCGGACCATGGACGCGGACGGGTGGACGGACCTCCTCCGCCGGGACCCGCCGGACC CGGAGGCCAGCTTCATCGCCCTCCGGCACGGACGGCCGGTCGCTATGAGCGCCGCGCACCCAGACCCCGACGCCGGGCTC ATCCTCTCCTGGCGGGGCGTCGCGGCAGGCCACCGGGCGCACGAGCGCGACCTGATCCTGGCGCTCACCCGCAGGCAGGT CCTGGCTGCGCACCGACGGGGACTCCCGGCGCTGAAGGGCGAGTTCGACAGCACCGACCCCTGGGCAATGATCCAGATGG AGGCGTTCCCGTTCCGGCCCGCGCCGTGCTGGGTGACCTTCCGGCGCGCACCCTGA
Upstream 100 bases:
>100_bases TCCCGGCGGACCTGCCGGAACACCACCGGCGCACCGTGCTCTTCGTCTCTGCCTTCGGCACGGTGCACAGGGTCAACCAG CAGTAAAGGAGGCGCTGGCC
Downstream 100 bases:
>100_bases TCCCGTCCCGTGCGCTCGCCTGTCTCTCCCTGAAGCACGTGCGTGCGGGGGCCGTCCCTCGTGCCGATCGCACTGCCGGG GACAGCTCTGAGAATCGAGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 311; Mature: 310
Protein sequence:
>311_residues MAQIRDYRPEDAPTLQDLLRQIWGQDTWTVQYYRFGASAPTAQGGFLRTLVADEGGTLVGFGSAWTNPFHPHALYVGINV HPRFGRRGLGTRLLMALAQRSPGRLPLQGSTWEHSESGMRFARRHGFTEVRRTWEPELPLGDPQEDLHADCESRCAALGY AIVPLADLQAASDGLRQLAPLLAEVYTATHGPNPPRTMDADGWTDLLRRDPPDPEASFIALRHGRPVAMSAAHPDPDAGL ILSWRGVAAGHRAHERDLILALTRRQVLAAHRRGLPALKGEFDSTDPWAMIQMEAFPFRPAPCWVTFRRAP
Sequences:
>Translated_311_residues MAQIRDYRPEDAPTLQDLLRQIWGQDTWTVQYYRFGASAPTAQGGFLRTLVADEGGTLVGFGSAWTNPFHPHALYVGINV HPRFGRRGLGTRLLMALAQRSPGRLPLQGSTWEHSESGMRFARRHGFTEVRRTWEPELPLGDPQEDLHADCESRCAALGY AIVPLADLQAASDGLRQLAPLLAEVYTATHGPNPPRTMDADGWTDLLRRDPPDPEASFIALRHGRPVAMSAAHPDPDAGL ILSWRGVAAGHRAHERDLILALTRRQVLAAHRRGLPALKGEFDSTDPWAMIQMEAFPFRPAPCWVTFRRAP >Mature_310_residues AQIRDYRPEDAPTLQDLLRQIWGQDTWTVQYYRFGASAPTAQGGFLRTLVADEGGTLVGFGSAWTNPFHPHALYVGINVH PRFGRRGLGTRLLMALAQRSPGRLPLQGSTWEHSESGMRFARRHGFTEVRRTWEPELPLGDPQEDLHADCESRCAALGYA IVPLADLQAASDGLRQLAPLLAEVYTATHGPNPPRTMDADGWTDLLRRDPPDPEASFIALRHGRPVAMSAAHPDPDAGLI LSWRGVAAGHRAHERDLILALTRRQVLAAHRRGLPALKGEFDSTDPWAMIQMEAFPFRPAPCWVTFRRAP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34552; Mature: 34420
Theoretical pI: Translated: 7.76; Mature: 7.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAQIRDYRPEDAPTLQDLLRQIWGQDTWTVQYYRFGASAPTAQGGFLRTLVADEGGTLVG CCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCEEEEEEECCCCCEEE FGSAWTNPFHPHALYVGINVHPRFGRRGLGTRLLMALAQRSPGRLPLQGSTWEHSESGMR ECCCCCCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHH FARRHGFTEVRRTWEPELPLGDPQEDLHADCESRCAALGYAIVPLADLQAASDGLRQLAP HHHHCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLAEVYTATHGPNPPRTMDADGWTDLLRRDPPDPEASFIALRHGRPVAMSAAHPDPDAGL HHHHHHHHCCCCCCCCCCCCCCHHHHHHCCCCCCCCCEEEEECCCCEEEECCCCCCCCCE ILSWRGVAAGHRAHERDLILALTRRQVLAAHRRGLPALKGEFDSTDPWAMIQMEAFPFRP EEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCCCC APCWVTFRRAP CCEEEEEECCC >Mature Secondary Structure AQIRDYRPEDAPTLQDLLRQIWGQDTWTVQYYRFGASAPTAQGGFLRTLVADEGGTLVG CCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCEEEEEEECCCCCEEE FGSAWTNPFHPHALYVGINVHPRFGRRGLGTRLLMALAQRSPGRLPLQGSTWEHSESGMR ECCCCCCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHH FARRHGFTEVRRTWEPELPLGDPQEDLHADCESRCAALGYAIVPLADLQAASDGLRQLAP HHHHCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLAEVYTATHGPNPPRTMDADGWTDLLRRDPPDPEASFIALRHGRPVAMSAAHPDPDAGL HHHHHHHHCCCCCCCCCCCCCCHHHHHHCCCCCCCCCEEEEECCCCEEEECCCCCCCCCE ILSWRGVAAGHRAHERDLILALTRRQVLAAHRRGLPALKGEFDSTDPWAMIQMEAFPFRP EEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCCCC APCWVTFRRAP CCEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA