Definition Symbiobacterium thermophilum IAM 14863 chromosome, complete genome.
Accession NC_006177
Length 3,566,135

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The map label for this gene is 51892690

Identifier: 51892690

GI number: 51892690

Start: 1689322

End: 1690257

Strand: Reverse

Name: 51892690

Synonym: STH1552

Alternate gene names: NA

Gene position: 1690257-1689322 (Counterclockwise)

Preceding gene: 51892691

Following gene: 51892642

Centisome position: 47.4

GC content: 72.76

Gene sequence:

>936_bases
GTGGCGCAGATTCGCGACTACCGACCCGAGGACGCCCCCACCCTGCAGGACCTCCTTCGGCAGATCTGGGGCCAGGACAC
GTGGACCGTGCAGTATTACCGCTTCGGCGCCAGCGCCCCGACGGCACAAGGCGGCTTCCTGCGCACGCTGGTGGCCGACG
AAGGCGGAACGCTTGTCGGATTCGGCTCCGCCTGGACCAACCCGTTTCATCCACACGCCCTGTACGTGGGGATCAACGTG
CACCCGCGGTTCGGGCGCCGGGGGCTGGGCACGCGGCTCTTGATGGCGCTGGCGCAGCGTAGCCCCGGCCGTCTCCCCCT
GCAGGGCTCCACCTGGGAGCACAGCGAATCCGGCATGCGCTTCGCCAGGCGCCACGGCTTCACGGAGGTGCGGCGCACCT
GGGAGCCCGAGCTGCCGCTGGGGGACCCGCAGGAGGACCTCCACGCGGACTGCGAGAGCCGCTGCGCCGCGCTGGGTTAC
GCGATCGTCCCGCTGGCTGACCTGCAGGCTGCGTCCGACGGGCTCCGGCAACTGGCACCCCTGCTGGCGGAGGTCTACAC
GGCGACCCACGGCCCGAACCCGCCCCGGACCATGGACGCGGACGGGTGGACGGACCTCCTCCGCCGGGACCCGCCGGACC
CGGAGGCCAGCTTCATCGCCCTCCGGCACGGACGGCCGGTCGCTATGAGCGCCGCGCACCCAGACCCCGACGCCGGGCTC
ATCCTCTCCTGGCGGGGCGTCGCGGCAGGCCACCGGGCGCACGAGCGCGACCTGATCCTGGCGCTCACCCGCAGGCAGGT
CCTGGCTGCGCACCGACGGGGACTCCCGGCGCTGAAGGGCGAGTTCGACAGCACCGACCCCTGGGCAATGATCCAGATGG
AGGCGTTCCCGTTCCGGCCCGCGCCGTGCTGGGTGACCTTCCGGCGCGCACCCTGA

Upstream 100 bases:

>100_bases
TCCCGGCGGACCTGCCGGAACACCACCGGCGCACCGTGCTCTTCGTCTCTGCCTTCGGCACGGTGCACAGGGTCAACCAG
CAGTAAAGGAGGCGCTGGCC

Downstream 100 bases:

>100_bases
TCCCGTCCCGTGCGCTCGCCTGTCTCTCCCTGAAGCACGTGCGTGCGGGGGCCGTCCCTCGTGCCGATCGCACTGCCGGG
GACAGCTCTGAGAATCGAGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 311; Mature: 310

Protein sequence:

>311_residues
MAQIRDYRPEDAPTLQDLLRQIWGQDTWTVQYYRFGASAPTAQGGFLRTLVADEGGTLVGFGSAWTNPFHPHALYVGINV
HPRFGRRGLGTRLLMALAQRSPGRLPLQGSTWEHSESGMRFARRHGFTEVRRTWEPELPLGDPQEDLHADCESRCAALGY
AIVPLADLQAASDGLRQLAPLLAEVYTATHGPNPPRTMDADGWTDLLRRDPPDPEASFIALRHGRPVAMSAAHPDPDAGL
ILSWRGVAAGHRAHERDLILALTRRQVLAAHRRGLPALKGEFDSTDPWAMIQMEAFPFRPAPCWVTFRRAP

Sequences:

>Translated_311_residues
MAQIRDYRPEDAPTLQDLLRQIWGQDTWTVQYYRFGASAPTAQGGFLRTLVADEGGTLVGFGSAWTNPFHPHALYVGINV
HPRFGRRGLGTRLLMALAQRSPGRLPLQGSTWEHSESGMRFARRHGFTEVRRTWEPELPLGDPQEDLHADCESRCAALGY
AIVPLADLQAASDGLRQLAPLLAEVYTATHGPNPPRTMDADGWTDLLRRDPPDPEASFIALRHGRPVAMSAAHPDPDAGL
ILSWRGVAAGHRAHERDLILALTRRQVLAAHRRGLPALKGEFDSTDPWAMIQMEAFPFRPAPCWVTFRRAP
>Mature_310_residues
AQIRDYRPEDAPTLQDLLRQIWGQDTWTVQYYRFGASAPTAQGGFLRTLVADEGGTLVGFGSAWTNPFHPHALYVGINVH
PRFGRRGLGTRLLMALAQRSPGRLPLQGSTWEHSESGMRFARRHGFTEVRRTWEPELPLGDPQEDLHADCESRCAALGYA
IVPLADLQAASDGLRQLAPLLAEVYTATHGPNPPRTMDADGWTDLLRRDPPDPEASFIALRHGRPVAMSAAHPDPDAGLI
LSWRGVAAGHRAHERDLILALTRRQVLAAHRRGLPALKGEFDSTDPWAMIQMEAFPFRPAPCWVTFRRAP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34552; Mature: 34420

Theoretical pI: Translated: 7.76; Mature: 7.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAQIRDYRPEDAPTLQDLLRQIWGQDTWTVQYYRFGASAPTAQGGFLRTLVADEGGTLVG
CCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCEEEEEEECCCCCEEE
FGSAWTNPFHPHALYVGINVHPRFGRRGLGTRLLMALAQRSPGRLPLQGSTWEHSESGMR
ECCCCCCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHH
FARRHGFTEVRRTWEPELPLGDPQEDLHADCESRCAALGYAIVPLADLQAASDGLRQLAP
HHHHCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLAEVYTATHGPNPPRTMDADGWTDLLRRDPPDPEASFIALRHGRPVAMSAAHPDPDAGL
HHHHHHHHCCCCCCCCCCCCCCHHHHHHCCCCCCCCCEEEEECCCCEEEECCCCCCCCCE
ILSWRGVAAGHRAHERDLILALTRRQVLAAHRRGLPALKGEFDSTDPWAMIQMEAFPFRP
EEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCCCC
APCWVTFRRAP
CCEEEEEECCC
>Mature Secondary Structure 
AQIRDYRPEDAPTLQDLLRQIWGQDTWTVQYYRFGASAPTAQGGFLRTLVADEGGTLVG
CCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCEEEEEEECCCCCEEE
FGSAWTNPFHPHALYVGINVHPRFGRRGLGTRLLMALAQRSPGRLPLQGSTWEHSESGMR
ECCCCCCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHH
FARRHGFTEVRRTWEPELPLGDPQEDLHADCESRCAALGYAIVPLADLQAASDGLRQLAP
HHHHCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLAEVYTATHGPNPPRTMDADGWTDLLRRDPPDPEASFIALRHGRPVAMSAAHPDPDAGL
HHHHHHHHCCCCCCCCCCCCCCHHHHHHCCCCCCCCCEEEEECCCCEEEECCCCCCCCCE
ILSWRGVAAGHRAHERDLILALTRRQVLAAHRRGLPALKGEFDSTDPWAMIQMEAFPFRP
EEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCCCC
APCWVTFRRAP
CCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA